Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486229

Identifier: 124486229

GI number: 124486229

Start: 1443335

End: 1444054

Strand: Reverse

Name: 124486229

Synonym: Mlab_1412

Alternate gene names: NA

Gene position: 1444054-1443335 (Counterclockwise)

Preceding gene: 124486230

Following gene: 124486227

Centisome position: 80.0

GC content: 48.61

Gene sequence:

>720_bases
ATGACCGAAAAAAACGGAAACCTTACTGCGGCCGATTTTCATCACGAACTGTACCGCAGATTTGATGCGGCAACGGAGCG
CGGCTCCTCGCATATCGAAGTTACGGCTGGAGAACTGCACAAAACACTCAAAGCATCCAACAGGCTTTCGATGTGCAGCA
ACGCGCTCTACGATATGCAGAACATTGGCGACGTTATCCTCTCCGTCCCGTCCGGCGGCGTTGGTTCATCTCTCCTGATC
AGGTACTCTCTTCCAAGGGAAAAAGGGCTTAATCTGGAACTCAGCATCTATGAACGCTCTGCCGTTCTCTCGGGGTACGA
GATGCGCATGAAACGGTTTATTGAAATCGCGGCGGTCCATCCGGTATTTCGTGATCTCGATCCCATCTCCCGCCAGAAAA
AATCAGAGACCGCCACCAGAAAACTCTGCGATATCACGATGAGTATCGCTGAACTCATCTGTAAACAACAGAAAATCCGT
GCCGACAACACAAAGTTCGGAACTCTTTGCGGGGTGATCGGCAGGACTGGTCTTTTGAGTGATGATGCATTATATGCGCT
GGATTTTGTCAGGATCGTCGGAAATACCAATGCAAGAAAAATTCCCGACACCTATCTGCTGACAACGAATGTCTTTTCGT
ATGCATCGTATGCGTTCCTGATTTTTGCTGAAGAGGTCATAGAGAAGCGGCTGGTCTGGAAAAAAGAAAAAGCTGAATAA

Upstream 100 bases:

>100_bases
AAAAGGACTTGGCGTTTTGTCTCCGAAGAAGAAAGGCAATATCATCATCGAGGTTGAAGTTGCAAAGAAAAAAGGTCTCT
TTGGCCTTTTTGGATGAATC

Downstream 100 bases:

>100_bases
AATATTATGTGCCGTGGTTCCACGAGCACATATACTCTTTTTGACCGCAGGAGAGCTCATCGATCGTTGCGCCTACAGCC
GCCAGTTTTAGCCGGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTEKNGNLTAADFHHELYRRFDAATERGSSHIEVTAGELHKTLKASNRLSMCSNALYDMQNIGDVILSVPSGGVGSSLLI
RYSLPREKGLNLELSIYERSAVLSGYEMRMKRFIEIAAVHPVFRDLDPISRQKKSETATRKLCDITMSIAELICKQQKIR
ADNTKFGTLCGVIGRTGLLSDDALYALDFVRIVGNTNARKIPDTYLLTTNVFSYASYAFLIFAEEVIEKRLVWKKEKAE

Sequences:

>Translated_239_residues
MTEKNGNLTAADFHHELYRRFDAATERGSSHIEVTAGELHKTLKASNRLSMCSNALYDMQNIGDVILSVPSGGVGSSLLI
RYSLPREKGLNLELSIYERSAVLSGYEMRMKRFIEIAAVHPVFRDLDPISRQKKSETATRKLCDITMSIAELICKQQKIR
ADNTKFGTLCGVIGRTGLLSDDALYALDFVRIVGNTNARKIPDTYLLTTNVFSYASYAFLIFAEEVIEKRLVWKKEKAE
>Mature_238_residues
TEKNGNLTAADFHHELYRRFDAATERGSSHIEVTAGELHKTLKASNRLSMCSNALYDMQNIGDVILSVPSGGVGSSLLIR
YSLPREKGLNLELSIYERSAVLSGYEMRMKRFIEIAAVHPVFRDLDPISRQKKSETATRKLCDITMSIAELICKQQKIRA
DNTKFGTLCGVIGRTGLLSDDALYALDFVRIVGNTNARKIPDTYLLTTNVFSYASYAFLIFAEEVIEKRLVWKKEKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26850; Mature: 26719

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKNGNLTAADFHHELYRRFDAATERGSSHIEVTAGELHKTLKASNRLSMCSNALYDMQ
CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHH
NIGDVILSVPSGGVGSSLLIRYSLPREKGLNLELSIYERSAVLSGYEMRMKRFIEIAAVH
HHHHHEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
PVFRDLDPISRQKKSETATRKLCDITMSIAELICKQQKIRADNTKFGTLCGVIGRTGLLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
DDALYALDFVRIVGNTNARKIPDTYLLTTNVFSYASYAFLIFAEEVIEKRLVWKKEKAE
CCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEKNGNLTAADFHHELYRRFDAATERGSSHIEVTAGELHKTLKASNRLSMCSNALYDMQ
CCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHH
NIGDVILSVPSGGVGSSLLIRYSLPREKGLNLELSIYERSAVLSGYEMRMKRFIEIAAVH
HHHHHEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
PVFRDLDPISRQKKSETATRKLCDITMSIAELICKQQKIRADNTKFGTLCGVIGRTGLLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
DDALYALDFVRIVGNTNARKIPDTYLLTTNVFSYASYAFLIFAEEVIEKRLVWKKEKAE
CCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA