Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486147

Identifier: 124486147

GI number: 124486147

Start: 1358757

End: 1359443

Strand: Reverse

Name: 124486147

Synonym: Mlab_1329

Alternate gene names: NA

Gene position: 1359443-1358757 (Counterclockwise)

Preceding gene: 124486148

Following gene: 124486146

Centisome position: 75.32

GC content: 55.6

Gene sequence:

>687_bases
ATGAGAAAGACCTTCACATTTCCGGCGCTTCTGCTGGCTCTGGCCCTTGTCGGCCTGGTCATCACGGCAGGCTGCGTTGG
AACCCCCACTACAACGCCCGGCACCTCGTTTTCCGGGACCGGAAACGAAAGCATCGCAACCGAACTCCCTGCCGGCGTTT
ATACCGTCACCATAACCCAGGCCAATATCACCGCCGTCTCTGTTGAAACGAAAGAGACAGAAACCTTTATTGAGGGAAGA
TACACCGACGCCGCGGCAGCAGCTGCCAAAACCGCAGACGGATGGGTCTGGACCTATGCTCTGCTGACCGACGCCAATCC
GACGCTGGTGATCAATGCAACCGGCGACTGGAAAGCAGAGTTTGCCTTCCCGCAGCAGATCGACGGCGTCCCGCCCCAGA
CCTTTACCGGTATCGGGAATGCAGCCACGCCTTTCTTCATGATCAATGAAGGCAACGTCTCTTTTGCGATCAAAGCGACG
AACAACACCGCAATTGGAGTCTGCCTGATGGATTATGACGGCAACCCGGTCATGGATGCAACGAACACGTTCGAAGAGCC
GCTTGCCTACCACCTTGGAACCTACAATGACACGATCGTTGTCCCAATCACCAAGTCCGACAACTATCTGCTCAATGTGA
TGTGCGACGGCGAATGGTCCGTTGTCGTCTCCGAAGTTCTGGCATAA

Upstream 100 bases:

>100_bases
CCGTTTTTACCTAAAAAGCATTTTTACCACATCTTTTGCCCCCTCTAGTCCAGAGATTCTTTCCAAACTCTAAAATATTC
TTCCAGCAGATATACTCGCT

Downstream 100 bases:

>100_bases
GCCAGGCCCATTTCTGCCGCCGCGGGACCGGGTCCGGATAACCCGGCGGCCTCTTTTTTTCTTTCCACGGATCTCGATTC
GCTGGGTGAGAGGCTCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRKTFTFPALLLALALVGLVITAGCVGTPTTTPGTSFSGTGNESIATELPAGVYTVTITQANITAVSVETKETETFIEGR
YTDAAAAAAKTADGWVWTYALLTDANPTLVINATGDWKAEFAFPQQIDGVPPQTFTGIGNAATPFFMINEGNVSFAIKAT
NNTAIGVCLMDYDGNPVMDATNTFEEPLAYHLGTYNDTIVVPITKSDNYLLNVMCDGEWSVVVSEVLA

Sequences:

>Translated_228_residues
MRKTFTFPALLLALALVGLVITAGCVGTPTTTPGTSFSGTGNESIATELPAGVYTVTITQANITAVSVETKETETFIEGR
YTDAAAAAAKTADGWVWTYALLTDANPTLVINATGDWKAEFAFPQQIDGVPPQTFTGIGNAATPFFMINEGNVSFAIKAT
NNTAIGVCLMDYDGNPVMDATNTFEEPLAYHLGTYNDTIVVPITKSDNYLLNVMCDGEWSVVVSEVLA
>Mature_228_residues
MRKTFTFPALLLALALVGLVITAGCVGTPTTTPGTSFSGTGNESIATELPAGVYTVTITQANITAVSVETKETETFIEGR
YTDAAAAAAKTADGWVWTYALLTDANPTLVINATGDWKAEFAFPQQIDGVPPQTFTGIGNAATPFFMINEGNVSFAIKAT
NNTAIGVCLMDYDGNPVMDATNTFEEPLAYHLGTYNDTIVVPITKSDNYLLNVMCDGEWSVVVSEVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24113; Mature: 24113

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTFTFPALLLALALVGLVITAGCVGTPTTTPGTSFSGTGNESIATELPAGVYTVTITQ
CCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEE
ANITAVSVETKETETFIEGRYTDAAAAAAKTADGWVWTYALLTDANPTLVINATGDWKAE
CCEEEEEEECCCCCEEECCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCEEE
FAFPQQIDGVPPQTFTGIGNAATPFFMINEGNVSFAIKATNNTAIGVCLMDYDGNPVMDA
EECHHHCCCCCCHHCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEEEECCCCCCCCC
TNTFEEPLAYHLGTYNDTIVVPITKSDNYLLNVMCDGEWSVVVSEVLA
CCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCC
>Mature Secondary Structure
MRKTFTFPALLLALALVGLVITAGCVGTPTTTPGTSFSGTGNESIATELPAGVYTVTITQ
CCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEE
ANITAVSVETKETETFIEGRYTDAAAAAAKTADGWVWTYALLTDANPTLVINATGDWKAE
CCEEEEEEECCCCCEEECCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCEEE
FAFPQQIDGVPPQTFTGIGNAATPFFMINEGNVSFAIKATNNTAIGVCLMDYDGNPVMDA
EECHHHCCCCCCHHCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEEEECCCCCCCCC
TNTFEEPLAYHLGTYNDTIVVPITKSDNYLLNVMCDGEWSVVVSEVLA
CCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA