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The map label for this gene is yvrB [H]

Identifier: 124486110

GI number: 124486110

Start: 1317072

End: 1318124

Strand: Reverse

Name: yvrB [H]

Synonym: Mlab_1290

Alternate gene names: 124486110

Gene position: 1318124-1317072 (Counterclockwise)

Preceding gene: 124486113

Following gene: 124486109

Centisome position: 73.03

GC content: 47.1

Gene sequence:

>1053_bases
GTGAATCTGCAAAAAAAAGAATTCAAACTAAAAACGCTCCTGATCATACTTACCCCGATTGTTCTGGTCAGCATGCTGCT
TGCTGTCGGTCTTGGACCGGTAAGCGTTAGTCCTGCAACAACAATCAATGTTATTTTCAGTCAGTTTCCCATTCTGCAAA
ATCTGGTCAGCGGCAACTACACGCAGCTTGATTACAATATTGTTTGGGGGCTTCGTCTCCCAAGGGTACTTCTTGGTTTT
ATCGTTGGAGCTTCGCTCGCTGTTTGCGGGGTTGCTATGCAGGCACTTGTCCGCAATAAATTAGCAGACCCCTTCGTTCT
CGGTGTCTCTTCCGGTGCTTGCGCCTCAGCCACATTATTTATGGTCACTGGAACATTTGCCTTTCTTGGGACCTACGCAC
TTTCATTCAACGCATTTTTAGGCGCTGCCGCATCAATTATCCTTGTTTATTGGCTTTCCCGTGTAAAGGGGCGCATCAAC
ATTCCTACACTCCTTCTTTCTGGTGTTGCTATTGCCATGATTTTGGATGCCGTAACAAAAACCATTGCTCTCAGCGCGCC
GAATGCACTTGCCGTACACAATCTTGATTTCTGGATGACTGGGTCATTAGCTGGTGCAAAATGGGGTTATCTCACTCTTC
CCCTTGTAATGATGCTTCTATGTCTGTTCTACCTCGTCATCCACTACCGTACCTTGAACCTTCTTCTTCTCGGGGATAAT
ACTGCTGGCACGCTTGGTGTAAATGTTGGACGAACACAAAAAATGCTGGTTCTTATCTCCTCCCTTCTAGCCGGTGTCAC
GATTGCCGTCAGTGGTTCAATTGGATTTGTCGGATTGATGATCCCTCACATCAGCAGGATGCTTGTGGGAAGCGATCACA
AAAAAGTCCTACCGTTATGTGTACTCCTTGGCGGATTCCTTGTTGTATGGACGGATGTAGCCGCCCGCCTCCTTCTCGCT
CCCGAAGAACTGCCGGTAGGAATACTTACGGCAATTATCGGTGGTCCCTGTTTTATAGCACTGCTTAAAAGTAAAGCAGG
AAGGGCAATATGA

Upstream 100 bases:

>100_bases
TTTAAATTTATGTGTGAAAATACAGTCTCCCCCTCCTTCTCTACACAACAACAGGAGAGCTGTTATTTAGCTTGTTGATG
TCCCATTACGGAGGGGCTCT

Downstream 100 bases:

>100_bases
TGACCAATAAATTAGAGGTACAACATTTGTCATATGCCTATTATGATGAGGATGTTATCTCTGACATTGATCTGTATGTT
GGAGAAAACGAGTTTGTTGG

Product: hypothetical protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNLQKKEFKLKTLLIILTPIVLVSMLLAVGLGPVSVSPATTINVIFSQFPILQNLVSGNYTQLDYNIVWGLRLPRVLLGF
IVGASLAVCGVAMQALVRNKLADPFVLGVSSGACASATLFMVTGTFAFLGTYALSFNAFLGAAASIILVYWLSRVKGRIN
IPTLLLSGVAIAMILDAVTKTIALSAPNALAVHNLDFWMTGSLAGAKWGYLTLPLVMMLLCLFYLVIHYRTLNLLLLGDN
TAGTLGVNVGRTQKMLVLISSLLAGVTIAVSGSIGFVGLMIPHISRMLVGSDHKKVLPLCVLLGGFLVVWTDVAARLLLA
PEELPVGILTAIIGGPCFIALLKSKAGRAI

Sequences:

>Translated_350_residues
MNLQKKEFKLKTLLIILTPIVLVSMLLAVGLGPVSVSPATTINVIFSQFPILQNLVSGNYTQLDYNIVWGLRLPRVLLGF
IVGASLAVCGVAMQALVRNKLADPFVLGVSSGACASATLFMVTGTFAFLGTYALSFNAFLGAAASIILVYWLSRVKGRIN
IPTLLLSGVAIAMILDAVTKTIALSAPNALAVHNLDFWMTGSLAGAKWGYLTLPLVMMLLCLFYLVIHYRTLNLLLLGDN
TAGTLGVNVGRTQKMLVLISSLLAGVTIAVSGSIGFVGLMIPHISRMLVGSDHKKVLPLCVLLGGFLVVWTDVAARLLLA
PEELPVGILTAIIGGPCFIALLKSKAGRAI
>Mature_350_residues
MNLQKKEFKLKTLLIILTPIVLVSMLLAVGLGPVSVSPATTINVIFSQFPILQNLVSGNYTQLDYNIVWGLRLPRVLLGF
IVGASLAVCGVAMQALVRNKLADPFVLGVSSGACASATLFMVTGTFAFLGTYALSFNAFLGAAASIILVYWLSRVKGRIN
IPTLLLSGVAIAMILDAVTKTIALSAPNALAVHNLDFWMTGSLAGAKWGYLTLPLVMMLLCLFYLVIHYRTLNLLLLGDN
TAGTLGVNVGRTQKMLVLISSLLAGVTIAVSGSIGFVGLMIPHISRMLVGSDHKKVLPLCVLLGGFLVVWTDVAARLLLA
PEELPVGILTAIIGGPCFIALLKSKAGRAI

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=282, Percent_Identity=39.0070921985816, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788004, Length=291, Percent_Identity=38.4879725085911, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1786805, Length=290, Percent_Identity=37.5862068965517, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1790741, Length=294, Percent_Identity=33.6734693877551, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786804, Length=279, Percent_Identity=30.4659498207885, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1786347, Length=288, Percent_Identity=30.2083333333333, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37058; Mature: 37058

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQKKEFKLKTLLIILTPIVLVSMLLAVGLGPVSVSPATTINVIFSQFPILQNLVSGNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TQLDYNIVWGLRLPRVLLGFIVGASLAVCGVAMQALVRNKLADPFVLGVSSGACASATLF
EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
MVTGTFAFLGTYALSFNAFLGAAASIILVYWLSRVKGRINIPTLLLSGVAIAMILDAVTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TIALSAPNALAVHNLDFWMTGSLAGAKWGYLTLPLVMMLLCLFYLVIHYRTLNLLLLGDN
HHEECCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
TAGTLGVNVGRTQKMLVLISSLLAGVTIAVSGSIGFVGLMIPHISRMLVGSDHKKVLPLC
CCCEEEECCCCHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
VLLGGFLVVWTDVAARLLLAPEELPVGILTAIIGGPCFIALLKSKAGRAI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNLQKKEFKLKTLLIILTPIVLVSMLLAVGLGPVSVSPATTINVIFSQFPILQNLVSGNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TQLDYNIVWGLRLPRVLLGFIVGASLAVCGVAMQALVRNKLADPFVLGVSSGACASATLF
EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
MVTGTFAFLGTYALSFNAFLGAAASIILVYWLSRVKGRINIPTLLLSGVAIAMILDAVTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TIALSAPNALAVHNLDFWMTGSLAGAKWGYLTLPLVMMLLCLFYLVIHYRTLNLLLLGDN
HHEECCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
TAGTLGVNVGRTQKMLVLISSLLAGVTIAVSGSIGFVGLMIPHISRMLVGSDHKKVLPLC
CCCEEEECCCCHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
VLLGGFLVVWTDVAARLLLAPEELPVGILTAIIGGPCFIALLKSKAGRAI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]