| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is yqgH [H]
Identifier: 124485937
GI number: 124485937
Start: 1127356
End: 1129239
Strand: Reverse
Name: yqgH [H]
Synonym: Mlab_1117
Alternate gene names: 124485937
Gene position: 1129239-1127356 (Counterclockwise)
Preceding gene: 124485938
Following gene: 124485936
Centisome position: 62.56
GC content: 51.22
Gene sequence:
>1884_bases ATGAACGTAAGGATTACAGCGGGATGGAAAGAGACAGGTATCAAATCGGTGTGGCTGGCAGCCGCACTGATCGCCGCCTC GGCAGTGGTGTTCATTCTCGGATACCTTGTCCTGACTTCTCTCCCGATTTTTTTTGAAACTGGTATCTCCGGATTTTTCT TTAATACAGTCTGGAATCCGACAGGCAGTACTCCGTCATATGGAATTGCCACTCTTATTATCGACACGCTTCTGGTAACA TTCGGAGCGATGATTTTTGCCGTACCTCTTGGTATCATCAGTGCCGTTTTTCTTGCCTATCTTGCCCCGCAAAAGGTCCG TGATATCGTCAAGCCGGCAATAGAACTTCTTGCAGGAATCCCGTCGGTAGTCTACGGATTTTTCGGCATGGTCGTTCTCT GCAGTTTCCTGCAGAGTACTTTGAATATTCCAAGCGGTTTTTCCTGGCTTGCCGCCTCGATCCTTCTAGGAATCATGGCA CTGCCGACGATCGTATCCGTCTCCGAAGATGCTCTCTATGTGGTTCCAAAGGATTACAAAGAGGCGTCGCTTGGTCTTGG AGCCACGAAATGGCAGACCATTTCGCGTGTGCTGATACCTGCCGCCGCATCGGGCATCTCGGCTGCGGTGATTCTTGGAA TCGGCCGTGCGATCGGCGAAACAATGGCCGTGATGATGGTCGCCGGAAATGCGGCAGTGATTCCGTCACCAATTTGGGAT GTCCTCTCCCCGGTCAGAACGCTGACGGCGACGCTTGGTATAGAGCTTGGCGAAGTCGCGACGGGCTCAATGCATTATTA CGCTCTCTTCGGCGTTGCAGCTGTGCTCCTGTTGATCACTCTTCTGATCAACCTCCTCTCAGGCAGGATCACAAAAAAGA TCCAGAGCGGCAGACCCGTCTTCAGCGTACCTGCCAAAATCAAAACATTCCTTAAGCTTTGCGGGGCGATACTTCTCATC AGCTTCCTGATGTATGCAATCGGGATCCTGCCGACGATCGTTCTGATGGCGATAGCCGGAGGACTGTTCTTCGTTCGGGG AGTTTTATCCCACAAATCGATCGAGCGAACAGCGTTTGGCCTAATTTATGCGGGAACGTTCATCGTTATCGGAATCCTGG TCCTTATTCTTGGAAACATTTTCATAAACGGGATCCCGGCAATTTCGTGGGAATTTCTGACGACTTCGCCGAGCAATATG GGACTGGAAGGAGGGATTTTCCCTGCGATCATCGGAACGCTCCAGCTGGTCGGCGGCGCTATTCTTATAGCCCTCCCAAT TGGAATCGGATCTGCGATCTATCTGCATGAATACTCCAGAGATAACATCCTGACCCGCCTTCTTAGGACAGGGAACGATC TGCTTGCCGGCACGCCGTCAATCGTTTTCGGCGTGTTCGGGTTTGCCTTCCTTGTTATATTCCTCGGATGGGGTGTCTGT CTTCTTGCAGGTATGGTCTGTCTTGCTTTGATGATCCTCCCAACGATCATAAAAACAACAGAAGAAGCCCTCAAATCGGT TCCAAACTCTCTGCGGGAGGCATCGCTTGGACTTGGTGCGACCAAATGGCAGACCCTGAAAAATGTGGTCTTACCCTCGG CGGCCCCCGGAATTCTTACCGGAACGATCCTTTCGATCGGAAGAGCAGCCGGCGAAACAGCCCCGATCATGTTCACTGCA GTGGTGTTTTCCAAACGGTTCATCAGTATGGATCTCTTTGATCCGGTGATGGCGCTTCCCTTCCATCTGTATGTCCTCGC AACAAGTGTGCCCGGGTCACAAACCCAGCAGTATGGGACCGCCGTCGTTCTTATATCCCTTGTTATGGCGATATACCTCG TTGCGATCGTGATTCGAAAACGTTTCCAGAAGAGATTAATATGA
Upstream 100 bases:
>100_bases ACGGTGAACCGACCGGCCTTGCAAAGAAGTTCCTTGAGTTCATTCTCTCGGATGAAGGTCAGACGATCATCGCAGAAAAC GGTTTTGTTCCGGTTAACGC
Downstream 100 bases:
>100_bases CATCCATTCTATCCACAAAAAACCTGAATCTTTCCTATGGATCGAAACAGACACTCTATGATATCGATTTTTCCTTTGAG GAAAAATCCGTAACAGCACT
Product: hypothetical protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MNVRITAGWKETGIKSVWLAAALIAASAVVFILGYLVLTSLPIFFETGISGFFFNTVWNPTGSTPSYGIATLIIDTLLVT FGAMIFAVPLGIISAVFLAYLAPQKVRDIVKPAIELLAGIPSVVYGFFGMVVLCSFLQSTLNIPSGFSWLAASILLGIMA LPTIVSVSEDALYVVPKDYKEASLGLGATKWQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSPIWD VLSPVRTLTATLGIELGEVATGSMHYYALFGVAAVLLLITLLINLLSGRITKKIQSGRPVFSVPAKIKTFLKLCGAILLI SFLMYAIGILPTIVLMAIAGGLFFVRGVLSHKSIERTAFGLIYAGTFIVIGILVLILGNIFINGIPAISWEFLTTSPSNM GLEGGIFPAIIGTLQLVGGAILIALPIGIGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGVC LLAGMVCLALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILTGTILSIGRAAGETAPIMFTA VVFSKRFISMDLFDPVMALPFHLYVLATSVPGSQTQQYGTAVVLISLVMAIYLVAIVIRKRFQKRLI
Sequences:
>Translated_627_residues MNVRITAGWKETGIKSVWLAAALIAASAVVFILGYLVLTSLPIFFETGISGFFFNTVWNPTGSTPSYGIATLIIDTLLVT FGAMIFAVPLGIISAVFLAYLAPQKVRDIVKPAIELLAGIPSVVYGFFGMVVLCSFLQSTLNIPSGFSWLAASILLGIMA LPTIVSVSEDALYVVPKDYKEASLGLGATKWQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSPIWD VLSPVRTLTATLGIELGEVATGSMHYYALFGVAAVLLLITLLINLLSGRITKKIQSGRPVFSVPAKIKTFLKLCGAILLI SFLMYAIGILPTIVLMAIAGGLFFVRGVLSHKSIERTAFGLIYAGTFIVIGILVLILGNIFINGIPAISWEFLTTSPSNM GLEGGIFPAIIGTLQLVGGAILIALPIGIGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGVC LLAGMVCLALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILTGTILSIGRAAGETAPIMFTA VVFSKRFISMDLFDPVMALPFHLYVLATSVPGSQTQQYGTAVVLISLVMAIYLVAIVIRKRFQKRLI >Mature_627_residues MNVRITAGWKETGIKSVWLAAALIAASAVVFILGYLVLTSLPIFFETGISGFFFNTVWNPTGSTPSYGIATLIIDTLLVT FGAMIFAVPLGIISAVFLAYLAPQKVRDIVKPAIELLAGIPSVVYGFFGMVVLCSFLQSTLNIPSGFSWLAASILLGIMA LPTIVSVSEDALYVVPKDYKEASLGLGATKWQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSPIWD VLSPVRTLTATLGIELGEVATGSMHYYALFGVAAVLLLITLLINLLSGRITKKIQSGRPVFSVPAKIKTFLKLCGAILLI SFLMYAIGILPTIVLMAIAGGLFFVRGVLSHKSIERTAFGLIYAGTFIVIGILVLILGNIFINGIPAISWEFLTTSPSNM GLEGGIFPAIIGTLQLVGGAILIALPIGIGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGVC LLAGMVCLALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILTGTILSIGRAAGETAPIMFTA VVFSKRFISMDLFDPVMALPFHLYVLATSVPGSQTQQYGTAVVLISLVMAIYLVAIVIRKRFQKRLI
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=279, Percent_Identity=37.9928315412186, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI1790164, Length=267, Percent_Identity=32.5842696629214, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788764, Length=163, Percent_Identity=28.8343558282209, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 66378; Mature: 66378
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRITAGWKETGIKSVWLAAALIAASAVVFILGYLVLTSLPIFFETGISGFFFNTVWNP CCEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCCCC TGSTPSYGIATLIIDTLLVTFGAMIFAVPLGIISAVFLAYLAPQKVRDIVKPAIELLAGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC PSVVYGFFGMVVLCSFLQSTLNIPSGFSWLAASILLGIMALPTIVSVSEDALYVVPKDYK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH EASLGLGATKWQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSPIWD HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHH VLSPVRTLTATLGIELGEVATGSMHYYALFGVAAVLLLITLLINLLSGRITKKIQSGRPV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FSVPAKIKTFLKLCGAILLISFLMYAIGILPTIVLMAIAGGLFFVRGVLSHKSIERTAFG EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYAGTFIVIGILVLILGNIFINGIPAISWEFLTTSPSNMGLEGGIFPAIIGTLQLVGGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH ILIALPIGIGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGVC HHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH LLAGMVCLALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHH GTILSIGRAAGETAPIMFTAVVFSKRFISMDLFDPVMALPFHLYVLATSVPGSQTQQYGT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHH AVVLISLVMAIYLVAIVIRKRFQKRLI HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVRITAGWKETGIKSVWLAAALIAASAVVFILGYLVLTSLPIFFETGISGFFFNTVWNP CCEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCCCC TGSTPSYGIATLIIDTLLVTFGAMIFAVPLGIISAVFLAYLAPQKVRDIVKPAIELLAGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC PSVVYGFFGMVVLCSFLQSTLNIPSGFSWLAASILLGIMALPTIVSVSEDALYVVPKDYK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH EASLGLGATKWQTISRVLIPAAASGISAAVILGIGRAIGETMAVMMVAGNAAVIPSPIWD HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHH VLSPVRTLTATLGIELGEVATGSMHYYALFGVAAVLLLITLLINLLSGRITKKIQSGRPV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FSVPAKIKTFLKLCGAILLISFLMYAIGILPTIVLMAIAGGLFFVRGVLSHKSIERTAFG EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYAGTFIVIGILVLILGNIFINGIPAISWEFLTTSPSNMGLEGGIFPAIIGTLQLVGGA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH ILIALPIGIGSAIYLHEYSRDNILTRLLRTGNDLLAGTPSIVFGVFGFAFLVIFLGWGVC HHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH LLAGMVCLALMILPTIIKTTEEALKSVPNSLREASLGLGATKWQTLKNVVLPSAAPGILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHH GTILSIGRAAGETAPIMFTAVVFSKRFISMDLFDPVMALPFHLYVLATSVPGSQTQQYGT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHH AVVLISLVMAIYLVAIVIRKRFQKRLI HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]