| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485851
Identifier: 124485851
GI number: 124485851
Start: 1040408
End: 1040680
Strand: Reverse
Name: 124485851
Synonym: Mlab_1031
Alternate gene names: NA
Gene position: 1040680-1040408 (Counterclockwise)
Preceding gene: 124485852
Following gene: 124485850
Centisome position: 57.66
GC content: 46.89
Gene sequence:
>273_bases ATGAACAAAACCATCATCACCGTCGTTGGAAAGGATGCGGTCGGCATCATCGCAAAAGTATGTACCTATTTATCGAATAA TCATATCAATGTCGAAGATATATCGCAGACAATCGTTCAGGGATACTTCAATATGATGATGATCGTCGACACCAGCAGCT CTGCGGTGCCGTTCGGCGATATGGCCCGCGATCTTGAACAGATCGGTCAGGAGATCGGTGTCCACATCAGATGTCAGCGC GAAGAGATATTCGAGAAGATGCACCGCATCTAA
Upstream 100 bases:
>100_bases GCCTCATGGTACTGATCCAAGCCCCGCAACAAACAAAGCTATTTGTCAATACACGGCGAATAACTTAGTAACTTTTTGAA TAACTCATAAGGAGAAAAGT
Downstream 100 bases:
>100_bases GGGGCATCCATGATCAATATCTTCGAGGTAAACGAGACCAATAAAATGATCGAGCAGGAGATGCTCGATGTCAGAACGAT CACGCTCGGTATCAGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGDMARDLEQIGQEIGVHIRCQR EEIFEKMHRI
Sequences:
>Translated_90_residues MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGDMARDLEQIGQEIGVHIRCQR EEIFEKMHRI >Mature_90_residues MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGDMARDLEQIGQEIGVHIRCQR EEIFEKMHRI
Specific function: Unknown
COG id: COG3830
COG function: function code T; ACT domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR022986 [H]
Pfam domain/function: PF01842 ACT [H]
EC number: NA
Molecular weight: Translated: 10144; Mature: 10144
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGD CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHH MARDLEQIGQEIGVHIRCQREEIFEKMHRI HHHHHHHHHHHCCEEEEECHHHHHHHHHCC >Mature Secondary Structure MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGD CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHH MARDLEQIGQEIGVHIRCQREEIFEKMHRI HHHHHHHHHHHCCEEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]