Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485831

Identifier: 124485831

GI number: 124485831

Start: 1017613

End: 1018374

Strand: Reverse

Name: 124485831

Synonym: Mlab_1011

Alternate gene names: NA

Gene position: 1018374-1017613 (Counterclockwise)

Preceding gene: 124485832

Following gene: 124485830

Centisome position: 56.42

GC content: 53.02

Gene sequence:

>762_bases
ATGGCTGAAGAAATTCCTGACGGAAAACTCGAAGAGCCGGTCGAAATTCTGTATCAGCTCGCAAAACGCGGCGAGATCGA
TCCGTGGAATATCGATATCGTCGCGGTGACAGAACGGTTTTTGACTGAACTTGAACGCAGGCGCGAACTTGATCTGATGA
TCTCGGGTCGGACGATATTCTATGCGTCGGTTCTGCTTCGGATGAAGTCCGAGCTGCTTGACGGTCTGGAGGATGACGGG
GGGTGTGATGAAGATATTTCCGAGGAAGGGTTGGATCCTTTCTCGGAAGATGATGTGATCACGGAACGTGCGCTCGGCCC
GATCGAACTTCTTGAGCGCGAGATCGACCGCAGACTCAAGCGGAAGGATGCGCGGAAGCGTCCGGTCACCCTTTACGAAC
TGATCAAACAGCTCAAACTTGCGGAGAAGGCGGAGCGAAGACGGCAGAGAAGGCGGCGGTGTATCGATTCAGAGGATGAA
TTATTCGAGGAACCGGATGCCGACGAGGTTGTGGGAATTGCGCATGATGAGGATTACGAACGTATGGCCGGGCGGATTTA
TGCTCTCGTTGAGACGCATCCGGATGCGCGTGACCCGGGGGTTTCCCTGCATGAACTGGCGTTAACTCTCCACTGGCCGG
TGTATTTTGTGTATCTCCCCTGTCTTTTTCTTGTTCAGAGCGGCAGGGTCGATCTTGAGCAGGATGAGTTTTTCGGTGAT
CTTTGGGTGGTGATTCAGGATGGCTATACAGAGAAGAGTTAA

Upstream 100 bases:

>100_bases
GTTTCGCACAGAAAACCGATGATCGAAGCGGCGGACCGGATGGTGGGCGTGACTCTGCGTATGAGCGATAAGAGTACGCT
TGTGACTGGTGTGAAGGTGA

Downstream 100 bases:

>100_bases
AAAAGAGCGTAATTTCTGGATAATTCTGTTGGATGTTCTGCTTATCCTTTGTCTGATCGGATTTGTGGCAATGCTTGTCT
CTATTGTGCTGTCATTTTTG

Product: condensin subunit ScpA

Products: NA

Alternate protein names: Condensin Subunit ScpA; Smc Operon Protein; Segregation And Condensation Protein ScpA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAEEIPDGKLEEPVEILYQLAKRGEIDPWNIDIVAVTERFLTELERRRELDLMISGRTIFYASVLLRMKSELLDGLEDDG
GCDEDISEEGLDPFSEDDVITERALGPIELLEREIDRRLKRKDARKRPVTLYELIKQLKLAEKAERRRQRRRRCIDSEDE
LFEEPDADEVVGIAHDEDYERMAGRIYALVETHPDARDPGVSLHELALTLHWPVYFVYLPCLFLVQSGRVDLEQDEFFGD
LWVVIQDGYTEKS

Sequences:

>Translated_253_residues
MAEEIPDGKLEEPVEILYQLAKRGEIDPWNIDIVAVTERFLTELERRRELDLMISGRTIFYASVLLRMKSELLDGLEDDG
GCDEDISEEGLDPFSEDDVITERALGPIELLEREIDRRLKRKDARKRPVTLYELIKQLKLAEKAERRRQRRRRCIDSEDE
LFEEPDADEVVGIAHDEDYERMAGRIYALVETHPDARDPGVSLHELALTLHWPVYFVYLPCLFLVQSGRVDLEQDEFFGD
LWVVIQDGYTEKS
>Mature_252_residues
AEEIPDGKLEEPVEILYQLAKRGEIDPWNIDIVAVTERFLTELERRRELDLMISGRTIFYASVLLRMKSELLDGLEDDGG
CDEDISEEGLDPFSEDDVITERALGPIELLEREIDRRLKRKDARKRPVTLYELIKQLKLAEKAERRRQRRRRCIDSEDEL
FEEPDADEVVGIAHDEDYERMAGRIYALVETHPDARDPGVSLHELALTLHWPVYFVYLPCLFLVQSGRVDLEQDEFFGDL
WVVIQDGYTEKS

Specific function: Unknown

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29496; Mature: 29364

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEIPDGKLEEPVEILYQLAKRGEIDPWNIDIVAVTERFLTELERRRELDLMISGRTIF
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEECCCHHH
YASVLLRMKSELLDGLEDDGGCDEDISEEGLDPFSEDDVITERALGPIELLEREIDRRLK
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
RKDARKRPVTLYELIKQLKLAEKAERRRQRRRRCIDSEDELFEEPDADEVVGIAHDEDYE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEECCCCCHHH
RMAGRIYALVETHPDARDPGVSLHELALTLHWPVYFVYLPCLFLVQSGRVDLEQDEFFGD
HHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCE
LWVVIQDGYTEKS
EEEEEECCCCCCC
>Mature Secondary Structure 
AEEIPDGKLEEPVEILYQLAKRGEIDPWNIDIVAVTERFLTELERRRELDLMISGRTIF
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEECCCHHH
YASVLLRMKSELLDGLEDDGGCDEDISEEGLDPFSEDDVITERALGPIELLEREIDRRLK
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
RKDARKRPVTLYELIKQLKLAEKAERRRQRRRRCIDSEDELFEEPDADEVVGIAHDEDYE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEECCCCCHHH
RMAGRIYALVETHPDARDPGVSLHELALTLHWPVYFVYLPCLFLVQSGRVDLEQDEFFGD
HHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCE
LWVVIQDGYTEKS
EEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA