| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485767
Identifier: 124485767
GI number: 124485767
Start: 944635
End: 945264
Strand: Reverse
Name: 124485767
Synonym: Mlab_0946
Alternate gene names: NA
Gene position: 945264-944635 (Counterclockwise)
Preceding gene: 124485768
Following gene: 124485766
Centisome position: 52.37
GC content: 47.14
Gene sequence:
>630_bases ATGTCAATTGGAATTGGAGAAAATTTATCCGGATCTTTTGGTTATGCAAAAGATAAACTCTTTGGGAGTATTGGGAACTG GATCCTTCTGATCATCCTGACCATTATCCCGATCGTCAACTTCATCGCAATGGGTACCTATCTGAAGGTATACCGCGGCG AGGACCCGAAAGTAGAAAACATCGGCAAATCGTTTGTTGACGGTCTTCTCATCCTCATCATCGTTTTCCTCTACATGCTC ATCCCGACCATCGTCTTACTGATTCTTGGAGGGGGCGCAATCTTTGCAGCCGGTTTAGGCGGACCTCAGGCTCTTATGGC AGGTCTTGGAATCGGCGTTCTTATTCTCTGCATCATCCTCTACATCCTGTTCGGTCTGATTATGACTCCGGCAATCGTCA GCTTTGCCCGCGGTGGATTTGGTGATGCCTTCAAATTCGGTCAGCTCTTTGCAATGATCGGCAAAGCCGGCTGGCTTAAG TACATCTTATCCATCATCATTCTCGGTATTATCTTTGGTATCATCGGTCTTCTTGGCGCGATTCCATTCGTCGGCTGGAT CATCATGATCATCATCTATCCGTTCCTTATCGTTTGGGGCAGCAAGTTCTGGGCAAACCTGTTCGAGTAA
Upstream 100 bases:
>100_bases AATCCAGGCATATTGTTTAACATTTTAGATACGTTAAGAGTGACTTTATATAGTAGAAAGTTCTTCTATAAACTATCTCA AAAAAGGAGATGGTATTATT
Downstream 100 bases:
>100_bases GATACCAAACATTTTTTTTCTTTTTTTATTAGTGACGTGCTCAGTTCCAGACGCGAATTGTTTTATATCACTGCATCCTT CATGTATCTATCTCATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSIGIGENLSGSFGYAKDKLFGSIGNWILLIILTIIPIVNFIAMGTYLKVYRGEDPKVENIGKSFVDGLLILIIVFLYML IPTIVLLILGGGAIFAAGLGGPQALMAGLGIGVLILCIILYILFGLIMTPAIVSFARGGFGDAFKFGQLFAMIGKAGWLK YILSIIILGIIFGIIGLLGAIPFVGWIIMIIIYPFLIVWGSKFWANLFE
Sequences:
>Translated_209_residues MSIGIGENLSGSFGYAKDKLFGSIGNWILLIILTIIPIVNFIAMGTYLKVYRGEDPKVENIGKSFVDGLLILIIVFLYML IPTIVLLILGGGAIFAAGLGGPQALMAGLGIGVLILCIILYILFGLIMTPAIVSFARGGFGDAFKFGQLFAMIGKAGWLK YILSIIILGIIFGIIGLLGAIPFVGWIIMIIIYPFLIVWGSKFWANLFE >Mature_208_residues SIGIGENLSGSFGYAKDKLFGSIGNWILLIILTIIPIVNFIAMGTYLKVYRGEDPKVENIGKSFVDGLLILIIVFLYMLI PTIVLLILGGGAIFAAGLGGPQALMAGLGIGVLILCIILYILFGLIMTPAIVSFARGGFGDAFKFGQLFAMIGKAGWLKY ILSIIILGIIFGIIGLLGAIPFVGWIIMIIIYPFLIVWGSKFWANLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22512; Mature: 22381
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGIGENLSGSFGYAKDKLFGSIGNWILLIILTIIPIVNFIAMGTYLKVYRGEDPKVEN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IGKSFVDGLLILIIVFLYMLIPTIVLLILGGGAIFAAGLGGPQALMAGLGIGVLILCIIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YILFGLIMTPAIVSFARGGFGDAFKFGQLFAMIGKAGWLKYILSIIILGIIFGIIGLLGA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPFVGWIIMIIIYPFLIVWGSKFWANLFE HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIGIGENLSGSFGYAKDKLFGSIGNWILLIILTIIPIVNFIAMGTYLKVYRGEDPKVEN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IGKSFVDGLLILIIVFLYMLIPTIVLLILGGGAIFAAGLGGPQALMAGLGIGVLILCIIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH YILFGLIMTPAIVSFARGGFGDAFKFGQLFAMIGKAGWLKYILSIIILGIIFGIIGLLGA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPFVGWIIMIIIYPFLIVWGSKFWANLFE HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA