| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485766
Identifier: 124485766
GI number: 124485766
Start: 943837
End: 944520
Strand: Reverse
Name: 124485766
Synonym: Mlab_0945
Alternate gene names: NA
Gene position: 944520-943837 (Counterclockwise)
Preceding gene: 124485767
Following gene: 124485765
Centisome position: 52.33
GC content: 48.39
Gene sequence:
>684_bases ATGTCAATAGGAATTGGAGAAAATTTAACCGCGTCTTTCGGGTTTACAAAGGAAAAACTCGGGGGCAATATCGGGACCTG GCTGATCCTCTCGATCCTGAACATCATCCCGATCGTCAACTGGATCGTCTACGGAGCGTACGTCAAAGTACTGCGTGGCG GTGATCCGGATCTCAACAATATGGGTAAGTCCTTCGTCGACGGACTTCTTGCACTGATCATCGGTCTCATCTACATGATC ATTCCGATCATTTTGATCGTTCTAGTCTCAGTCGGCATGTTTACCGTAAGTTCGGTTGCTACAATAACGCCGATGTCGTC AATGTCTCCTATGTCTCAGGTCATGCCAGTAGTTACAACTGGTGCGGGTTTTGCCCTTATGTTCGGTCTGATCATACTCT GCATCATCGTGGCATTCCTGTTCGCTCTGTTTGCAAAACCGGCCGTGGTGAACTTTGCGCGAAACGGATTCGGCGCTGCG TTCAGGTTCGGAGAAATATTCAGAATGATCAGCAAAGCCGGCTGGCTCAAGTACATCCTTTCGCTCATCCTCTTCTGGTT CATCTTTGGTGCGATCATTCTCGTCTGCTTGATGATCCCGATCATCGGCTGGATCCTTCTGATCTTCATCATGCCGTTCC TGTATTGCTGGGGATCGAAGTATCTTGCAAATCTGTTCGAGTAA
Upstream 100 bases:
>100_bases TTTTTCTTTTTTTATTAGTGACGTGCTCAGTTCCAGACGCGAATTGTTTTATATCACTGCATCCTTCATGTATCTATCTC ATTCATGAGAGGGAATTATT
Downstream 100 bases:
>100_bases GAACAGAAAATCTACTTTTTTTAACTGTGTTCCCGGACAAATCCCATTGGAATTAGTTTATCAGTCTATAGTATCCCAAA AGGTATGAACTCTGTAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSIGIGENLTASFGFTKEKLGGNIGTWLILSILNIIPIVNWIVYGAYVKVLRGGDPDLNNMGKSFVDGLLALIIGLIYMI IPIILIVLVSVGMFTVSSVATITPMSSMSPMSQVMPVVTTGAGFALMFGLIILCIIVAFLFALFAKPAVVNFARNGFGAA FRFGEIFRMISKAGWLKYILSLILFWFIFGAIILVCLMIPIIGWILLIFIMPFLYCWGSKYLANLFE
Sequences:
>Translated_227_residues MSIGIGENLTASFGFTKEKLGGNIGTWLILSILNIIPIVNWIVYGAYVKVLRGGDPDLNNMGKSFVDGLLALIIGLIYMI IPIILIVLVSVGMFTVSSVATITPMSSMSPMSQVMPVVTTGAGFALMFGLIILCIIVAFLFALFAKPAVVNFARNGFGAA FRFGEIFRMISKAGWLKYILSLILFWFIFGAIILVCLMIPIIGWILLIFIMPFLYCWGSKYLANLFE >Mature_226_residues SIGIGENLTASFGFTKEKLGGNIGTWLILSILNIIPIVNWIVYGAYVKVLRGGDPDLNNMGKSFVDGLLALIIGLIYMII PIILIVLVSVGMFTVSSVATITPMSSMSPMSQVMPVVTTGAGFALMFGLIILCIIVAFLFALFAKPAVVNFARNGFGAAF RFGEIFRMISKAGWLKYILSLILFWFIFGAIILVCLMIPIIGWILLIFIMPFLYCWGSKYLANLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24888; Mature: 24757
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGIGENLTASFGFTKEKLGGNIGTWLILSILNIIPIVNWIVYGAYVKVLRGGDPDLNN CCCCCCCCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MGKSFVDGLLALIIGLIYMIIPIILIVLVSVGMFTVSSVATITPMSSMSPMSQVMPVVTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHC GAGFALMFGLIILCIIVAFLFALFAKPAVVNFARNGFGAAFRFGEIFRMISKAGWLKYIL CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLILFWFIFGAIILVCLMIPIIGWILLIFIMPFLYCWGSKYLANLFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIGIGENLTASFGFTKEKLGGNIGTWLILSILNIIPIVNWIVYGAYVKVLRGGDPDLNN CCCCCCCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MGKSFVDGLLALIIGLIYMIIPIILIVLVSVGMFTVSSVATITPMSSMSPMSQVMPVVTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHC GAGFALMFGLIILCIIVAFLFALFAKPAVVNFARNGFGAAFRFGEIFRMISKAGWLKYIL CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH SLILFWFIFGAIILVCLMIPIIGWILLIFIMPFLYCWGSKYLANLFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA