| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485742
Identifier: 124485742
GI number: 124485742
Start: 915871
End: 916608
Strand: Reverse
Name: 124485742
Synonym: Mlab_0920
Alternate gene names: NA
Gene position: 916608-915871 (Counterclockwise)
Preceding gene: 124485743
Following gene: 124485741
Centisome position: 50.78
GC content: 57.32
Gene sequence:
>738_bases ATGTCTGATATTCCAGCATCCCATCCAAGATACAAATCGCTTATCACGAGAGAACAGCTTGCCGGTTACGCAAAAAGCGG CGTCGTTTCCATGGAAGGTCTGACCTCCCACGGACGCGGTGAAGCCTTCGATTATCTGTTCGGCGAAAAAACATCCGCCT CGGCCCTTGAAGCCGAAAAACTTGGCGCACGCGTTCTGCTTGCCGCAAAACACCCGGTCCTTTCCATCAACGGAAACACG GCCGCCCTCGCAGCAAAAGAGATTGCCCAGCTGCAGAAGGCAAGCGGCGCCGAGGTCGAGGTGAACCTCTTCCACCGGAC CGATGAGAGGATGACGCTTGTCACAAACCTTCTCGAAGAGGCTGGATGCATCGTCTCCAAAGGCCCTGTCGAGCGGTGCG TCCCTCTACCCCATGCCCGCGGTCTCTGCCGTCCCGACGGGATCGGTTCGGCCGACGTCGTTTTAGTCCCTCTTGAAGAC GGCGACCGGTGCGAAGCCCTCGTTTCGATGGGCAAACTGGTTATCACCGTCGATCTGAACCCGATCGACCGCACCTCCAA AACAGCCACCCTGCCGATCATCGACGAGGTCACCCGTGCCCTGCCCAACATCGCTCTGGAATGCGACCGGCTCAAGGCAT CGGGCGAGACCGTTACGATGCCCGAAATCGACGCAAGATATTTCCTCAGCCAGGCTGTAAAGGATATTCAGGAATTCCTT TCCCATGCTCTGGATTGA
Upstream 100 bases:
>100_bases TTTGCCGTCGGTCCCGCGGCTGAAAATGTTTTGAAACAGTTCGGCGAACCGATTCTACTGCATGTCAGCAGATCAGGTCC TGTCATTCTCGAGGAAAATT
Downstream 100 bases:
>100_bases AAAATACCGCCCGACCTCGTTTGAAGAGGTGATCGGACAAAACAGTCCGGTAAAGCAGCTCTCTGCCTACGCAGCTCTCG GCAACCTCCCGCACCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEKLGARVLLAAKHPVLSINGNT AALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEEAGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLED GDRCEALVSMGKLVITVDLNPIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL SHALD
Sequences:
>Translated_245_residues MSDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEKLGARVLLAAKHPVLSINGNT AALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEEAGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLED GDRCEALVSMGKLVITVDLNPIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL SHALD >Mature_244_residues SDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEKLGARVLLAAKHPVLSINGNTA ALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEEAGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLEDG DRCEALVSMGKLVITVDLNPIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFLS HALD
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction [H]
COG id: COG1701
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal pantothenate synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002855 - ProDom: PD016827 [H]
Pfam domain/function: PF02006 DUF137 [H]
EC number: NA
Molecular weight: Translated: 26302; Mature: 26171
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEK CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHH LGARVLLAAKHPVLSINGNTAALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEE CCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH AGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLEDGDRCEALVSMGKLVITVDLN CCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECC PIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL CCCCCCCCEECCHHHHHHHHCCHHEEEHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH SHALD HHHCC >Mature Secondary Structure SDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEK CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHH LGARVLLAAKHPVLSINGNTAALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEE CCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH AGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLEDGDRCEALVSMGKLVITVDLN CCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECC PIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL CCCCCCCCEECCHHHHHHHHCCHHEEEHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH SHALD HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]