Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485742

Identifier: 124485742

GI number: 124485742

Start: 915871

End: 916608

Strand: Reverse

Name: 124485742

Synonym: Mlab_0920

Alternate gene names: NA

Gene position: 916608-915871 (Counterclockwise)

Preceding gene: 124485743

Following gene: 124485741

Centisome position: 50.78

GC content: 57.32

Gene sequence:

>738_bases
ATGTCTGATATTCCAGCATCCCATCCAAGATACAAATCGCTTATCACGAGAGAACAGCTTGCCGGTTACGCAAAAAGCGG
CGTCGTTTCCATGGAAGGTCTGACCTCCCACGGACGCGGTGAAGCCTTCGATTATCTGTTCGGCGAAAAAACATCCGCCT
CGGCCCTTGAAGCCGAAAAACTTGGCGCACGCGTTCTGCTTGCCGCAAAACACCCGGTCCTTTCCATCAACGGAAACACG
GCCGCCCTCGCAGCAAAAGAGATTGCCCAGCTGCAGAAGGCAAGCGGCGCCGAGGTCGAGGTGAACCTCTTCCACCGGAC
CGATGAGAGGATGACGCTTGTCACAAACCTTCTCGAAGAGGCTGGATGCATCGTCTCCAAAGGCCCTGTCGAGCGGTGCG
TCCCTCTACCCCATGCCCGCGGTCTCTGCCGTCCCGACGGGATCGGTTCGGCCGACGTCGTTTTAGTCCCTCTTGAAGAC
GGCGACCGGTGCGAAGCCCTCGTTTCGATGGGCAAACTGGTTATCACCGTCGATCTGAACCCGATCGACCGCACCTCCAA
AACAGCCACCCTGCCGATCATCGACGAGGTCACCCGTGCCCTGCCCAACATCGCTCTGGAATGCGACCGGCTCAAGGCAT
CGGGCGAGACCGTTACGATGCCCGAAATCGACGCAAGATATTTCCTCAGCCAGGCTGTAAAGGATATTCAGGAATTCCTT
TCCCATGCTCTGGATTGA

Upstream 100 bases:

>100_bases
TTTGCCGTCGGTCCCGCGGCTGAAAATGTTTTGAAACAGTTCGGCGAACCGATTCTACTGCATGTCAGCAGATCAGGTCC
TGTCATTCTCGAGGAAAATT

Downstream 100 bases:

>100_bases
AAAATACCGCCCGACCTCGTTTGAAGAGGTGATCGGACAAAACAGTCCGGTAAAGCAGCTCTCTGCCTACGCAGCTCTCG
GCAACCTCCCGCACCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEKLGARVLLAAKHPVLSINGNT
AALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEEAGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLED
GDRCEALVSMGKLVITVDLNPIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL
SHALD

Sequences:

>Translated_245_residues
MSDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEKLGARVLLAAKHPVLSINGNT
AALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEEAGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLED
GDRCEALVSMGKLVITVDLNPIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL
SHALD
>Mature_244_residues
SDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEKLGARVLLAAKHPVLSINGNTA
ALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEEAGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLEDG
DRCEALVSMGKLVITVDLNPIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFLS
HALD

Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction [H]

COG id: COG1701

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal pantothenate synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002855
- ProDom:   PD016827 [H]

Pfam domain/function: PF02006 DUF137 [H]

EC number: NA

Molecular weight: Translated: 26302; Mature: 26171

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHH
LGARVLLAAKHPVLSINGNTAALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEE
CCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH
AGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLEDGDRCEALVSMGKLVITVDLN
CCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECC
PIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL
CCCCCCCCEECCHHHHHHHHCCHHEEEHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
SHALD
HHHCC
>Mature Secondary Structure 
SDIPASHPRYKSLITREQLAGYAKSGVVSMEGLTSHGRGEAFDYLFGEKTSASALEAEK
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHH
LGARVLLAAKHPVLSINGNTAALAAKEIAQLQKASGAEVEVNLFHRTDERMTLVTNLLEE
CCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH
AGCIVSKGPVERCVPLPHARGLCRPDGIGSADVVLVPLEDGDRCEALVSMGKLVITVDLN
CCCEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECC
PIDRTSKTATLPIIDEVTRALPNIALECDRLKASGETVTMPEIDARYFLSQAVKDIQEFL
CCCCCCCCEECCHHHHHHHHCCHHEEEHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
SHALD
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]