| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485707
Identifier: 124485707
GI number: 124485707
Start: 873868
End: 874209
Strand: Reverse
Name: 124485707
Synonym: Mlab_0885
Alternate gene names: NA
Gene position: 874209-873868 (Counterclockwise)
Preceding gene: 124485708
Following gene: 124485706
Centisome position: 48.43
GC content: 39.47
Gene sequence:
>342_bases ATGAAATCCGAGTATATCTATCTGGACCACATGCTTCAGCGCTGTGAAAAAATACGAAAAATTACCAGTTCGGTCAAAAA AGAGGCATTCTTTCTGGATGAAGACAAATTGGATCTTGTTGTCCATTCTCTGGAGATCATCGGAGAGGCAACCACCCATA TTTCCAAGGAGTTCAAAAAAGAACATGATGAAATACCCTGGCAGGAGATCAAGGATTTTCGAAACGTTATGTTCCATCAG TATTTTCGCATAGATCCTGAGGTAGTTTGGACCGTCGCAAATACAGATATTGAAGATCTCTATGTATTCCTGATCAGGAT CCTGAATAAAGACGAGATATAA
Upstream 100 bases:
>100_bases GAAGAACGGTCGATTTAGTTCCCGTACGATGGCTGGCACCGTCACTTCGCCCCTACATAGAACGCGATATGATACTGTTT GAAGCAAATAAGGCAGAGGC
Downstream 100 bases:
>100_bases GCTGCCTATGGGCTAATACACTGTCATTTTCGCGAACATCACTGTTGAATAACCAAAAAAACGCATCCTCGCAGTATTGC TTATTATCTCATCTGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKSEYIYLDHMLQRCEKIRKITSSVKKEAFFLDEDKLDLVVHSLEIIGEATTHISKEFKKEHDEIPWQEIKDFRNVMFHQ YFRIDPEVVWTVANTDIEDLYVFLIRILNKDEI
Sequences:
>Translated_113_residues MKSEYIYLDHMLQRCEKIRKITSSVKKEAFFLDEDKLDLVVHSLEIIGEATTHISKEFKKEHDEIPWQEIKDFRNVMFHQ YFRIDPEVVWTVANTDIEDLYVFLIRILNKDEI >Mature_113_residues MKSEYIYLDHMLQRCEKIRKITSSVKKEAFFLDEDKLDLVVHSLEIIGEATTHISKEFKKEHDEIPWQEIKDFRNVMFHQ YFRIDPEVVWTVANTDIEDLYVFLIRILNKDEI
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 13691; Mature: 13691
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEYIYLDHMLQRCEKIRKITSSVKKEAFFLDEDKLDLVVHSLEIIGEATTHISKEFKK CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EHDEIPWQEIKDFRNVMFHQYFRIDPEVVWTVANTDIEDLYVFLIRILNKDEI HHCCCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSEYIYLDHMLQRCEKIRKITSSVKKEAFFLDEDKLDLVVHSLEIIGEATTHISKEFKK CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EHDEIPWQEIKDFRNVMFHQYFRIDPEVVWTVANTDIEDLYVFLIRILNKDEI HHCCCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]