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The map label for this gene is han1A [H]

Identifier: 124485319

GI number: 124485319

Start: 466241

End: 466444

Strand: Reverse

Name: han1A [H]

Synonym: Mlab_0494

Alternate gene names: 124485319

Gene position: 466444-466241 (Counterclockwise)

Preceding gene: 124485320

Following gene: 124485307

Centisome position: 25.84

GC content: 49.02

Gene sequence:

>204_bases
ATGGCAGACTTACCAAAAGCAGCAGTCGTCAGACTTGCAAAGAAAGCTGGCGCCGTTCGTGTAGGCGAAGATGCAGCAGA
TGCATTAGTAGCAAAAGCAGAAGCGTATATTGAAGCTATCGCAAAGCAGGCATTCGAACTTGCCCAGCATGCAGGTCGCA
AGACCATCAAGGCAGAGGATATTGACCTCGCCACTAAGGAATAA

Upstream 100 bases:

>100_bases
AATAAAAAATAGCCGCGAAATATCATCAGTCTGCTGAAAATGTCCATAACCGGCATAGTTTTATATATTATTTTGAACCA
TTTTTTGTTTGAGAATAATT

Downstream 100 bases:

>100_bases
CCTGATTTTGTGTGGTGTGCGGGTCGATGGTGCCCGTGCATAAAAAACAAGCCCAGGCTTGTATTTTTTCATACGGGCGG
TTTCGTATGAGGCCTCCCGG

Product: histone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MADLPKAAVVRLAKKAGAVRVGEDAADALVAKAEAYIEAIAKQAFELAQHAGRKTIKAEDIDLATKE

Sequences:

>Translated_67_residues
MADLPKAAVVRLAKKAGAVRVGEDAADALVAKAEAYIEAIAKQAFELAQHAGRKTIKAEDIDLATKE
>Mature_66_residues
ADLPKAAVVRLAKKAGAVRVGEDAADALVAKAEAYIEAIAKQAFELAQHAGRKTIKAEDIDLATKE

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 7032; Mature: 6901

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLPKAAVVRLAKKAGAVRVGEDAADALVAKAEAYIEAIAKQAFELAQHAGRKTIKAED
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IDLATKE
CCCCCCC
>Mature Secondary Structure 
ADLPKAAVVRLAKKAGAVRVGEDAADALVAKAEAYIEAIAKQAFELAQHAGRKTIKAED
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IDLATKE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8652658; 8861206 [H]