| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485179
Identifier: 124485179
GI number: 124485179
Start: 332563
End: 332799
Strand: Reverse
Name: 124485179
Synonym: Mlab_0352
Alternate gene names: NA
Gene position: 332799-332563 (Counterclockwise)
Preceding gene: 124485180
Following gene: 124485178
Centisome position: 18.44
GC content: 46.41
Gene sequence:
>237_bases ATGAACAAACATACAACTATCGCAAAAAAAGCCGGAAAGGGTCTTGCCGCCTATCTGACCGACTGGAAAAATCTGCTGGC GCATGCTCTTCTTGGGTGTCTTCTGCTTCTTATTGCGATTATCGCACCGGTCCCGATATGGGCAAAACTTCTGCTGATCA TCTGCCTTGTGACGCTGAACATCATCCGCATGAAATGGTCAAAGAGCCGAAAGATGCAGAATAAAGTGGAAAGATGA
Upstream 100 bases:
>100_bases CAGTGTTGGATGAATTTTCGCCTGCGGAGATCGATTTGCTGAACGATATGCTTGCAAGACTTGCACAAAATGCGAAAGTG GCCGGTACCCGGGAGAGAGA
Downstream 100 bases:
>100_bases AAAAAATACCTCTGCCGCAATTACCTTTAAGTCTACGTGGGATGATTTAGTTAGTAACGAAACCGGAGGCAGGATCATGA CATACGCAGTAATTTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MNKHTTIAKKAGKGLAAYLTDWKNLLAHALLGCLLLLIAIIAPVPIWAKLLLIICLVTLNIIRMKWSKSRKMQNKVER
Sequences:
>Translated_78_residues MNKHTTIAKKAGKGLAAYLTDWKNLLAHALLGCLLLLIAIIAPVPIWAKLLLIICLVTLNIIRMKWSKSRKMQNKVER >Mature_78_residues MNKHTTIAKKAGKGLAAYLTDWKNLLAHALLGCLLLLIAIIAPVPIWAKLLLIICLVTLNIIRMKWSKSRKMQNKVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8790; Mature: 8790
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHTTIAKKAGKGLAAYLTDWKNLLAHALLGCLLLLIAIIAPVPIWAKLLLIICLVTLN CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IIRMKWSKSRKMQNKVER HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKHTTIAKKAGKGLAAYLTDWKNLLAHALLGCLLLLIAIIAPVPIWAKLLLIICLVTLN CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IIRMKWSKSRKMQNKVER HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA