| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485178
Identifier: 124485178
GI number: 124485178
Start: 332058
End: 332486
Strand: Reverse
Name: 124485178
Synonym: Mlab_0351
Alternate gene names: NA
Gene position: 332486-332058 (Counterclockwise)
Preceding gene: 124485179
Following gene: 124485173
Centisome position: 18.42
GC content: 49.42
Gene sequence:
>429_bases ATGACATACGCAGTAATTTACTTTTCACGAACGGGAACCAGCAGGAGGATTGCTGAAAAAATCGCGAAAGAACTCTCCGT CGAACCGGTAGAGGTGACCGACAACATGGATTGGGACGGCACTCTCGGCTACATGCGTGCAGCACGCTATGCGATGAAAA ACAAAGATGTCGCCATTCAGACCCGCGGAAAGATCGGCGAGGTGGACGAGTATATCGTCGTGAGCCCGATGTGGTGCGGA AAAATCACACCGGCGATCCGGATTCTTCTCCAAGAACTTCCAAAAGAGAAAGTCCGCCTGATTGTTTCTTCCGGAGGCAT GATCTACAAAGAACGGGATGGATATCTCTCCGTTCTCGACATTATGAAGAAAGACAAAAACGAAGATCGGCAGATCGATG CATTCGTCGGCGGTCTGAAAAACTCCTAA
Upstream 100 bases:
>100_bases ATGCAGAATAAAGTGGAAAGATGAAAAAAATACCTCTGCCGCAATTACCTTTAAGTCTACGTGGGATGATTTAGTTAGTA ACGAAACCGGAGGCAGGATC
Downstream 100 bases:
>100_bases CCAAATCACTCTTTTTTTCACGGAAGCAGCATCCGGATGGCGATCACCAGCATCAGGATAAAAAATATGCGCCGAAGCCA GACCTCCGGCACGCGGCACG
Product: pyruvate carboxyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTYAVIYFSRTGTSRRIAEKIAKELSVEPVEVTDNMDWDGTLGYMRAARYAMKNKDVAIQTRGKIGEVDEYIVVSPMWCG KITPAIRILLQELPKEKVRLIVSSGGMIYKERDGYLSVLDIMKKDKNEDRQIDAFVGGLKNS
Sequences:
>Translated_142_residues MTYAVIYFSRTGTSRRIAEKIAKELSVEPVEVTDNMDWDGTLGYMRAARYAMKNKDVAIQTRGKIGEVDEYIVVSPMWCG KITPAIRILLQELPKEKVRLIVSSGGMIYKERDGYLSVLDIMKKDKNEDRQIDAFVGGLKNS >Mature_141_residues TYAVIYFSRTGTSRRIAEKIAKELSVEPVEVTDNMDWDGTLGYMRAARYAMKNKDVAIQTRGKIGEVDEYIVVSPMWCGK ITPAIRILLQELPKEKVRLIVSSGGMIYKERDGYLSVLDIMKKDKNEDRQIDAFVGGLKNS
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16099; Mature: 15968
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYAVIYFSRTGTSRRIAEKIAKELSVEPVEVTDNMDWDGTLGYMRAARYAMKNKDVAIQ CEEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEE TRGKIGEVDEYIVVSPMWCGKITPAIRILLQELPKEKVRLIVSSGGMIYKERDGYLSVLD ECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCEEEEECCCHHHHHH IMKKDKNEDRQIDAFVGGLKNS HHHCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure TYAVIYFSRTGTSRRIAEKIAKELSVEPVEVTDNMDWDGTLGYMRAARYAMKNKDVAIQ EEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEE TRGKIGEVDEYIVVSPMWCGKITPAIRILLQELPKEKVRLIVSSGGMIYKERDGYLSVLD ECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHEEEEECCCCEEEEECCCHHHHHH IMKKDKNEDRQIDAFVGGLKNS HHHCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA