| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485153
Identifier: 124485153
GI number: 124485153
Start: 307839
End: 308669
Strand: Reverse
Name: 124485153
Synonym: Mlab_0326
Alternate gene names: NA
Gene position: 308669-307839 (Counterclockwise)
Preceding gene: 124485154
Following gene: 124485152
Centisome position: 17.1
GC content: 43.92
Gene sequence:
>831_bases ATGAACGATGCAAACGCAGAATGGAATGAAAATTATCACCTTCAGGAAATTAAACCACGATTCAAATCAAGCGCCCAGCA TTTCCAAGAAAAAGAAAATGCCGAGAATATGGTCAAAAGGCTGATAGAGCACCCAAGCCCGCACATTCAGGACCAACTTC AATCTCTGGCATTCCCGCCGGGAAGTACCGTACTGGATATTGGTGCAGGACCCGGAACACTGGCCGTACCTCTCACAAAA GAGGGCCATATCGTAACCGTTGTAGAACCCTCCAAAGCCATGAAAGATGCAATGGAACAATACAAACAGTATTGCGGCGT CAAAGCAGACATTCCCCGGATTGAAAAACTCTGGGAAAACGTAGATCCCGCGGAAATTGGCACATACGATTACGTCATCT CCTCATTTGCTCTCGGGGTCCCCGACCTGAAAAAAGCACTGATGAAAATGAATGCCGTCGCAAACAAGGAGGTCCACATC TTCTGGTTCCTGAATCCACAATCATGGAGCCAAATCAAGAAAGATCTCTACACGTTATTGTATCAAGAAGACTATCCTGA CTGGATGTCCTATGCAAACGTTGTATGGCAGGCCCTGTATCAGGAGAATATTTATGCCAATCTCACCGTCCATGCGAGAA CAGACAAAGACAGATACAAAAACATTGATGAAGTTGTTTCCATGTATGTCAGGCAGTTTTCAGTAACAGATGAGATACAG AGAAATATCATAGAAAACTACCTCAACGAACATTTGACTATGCAAAATGACGGATGGTATACTCTGCCTAACAATGGAAA ATACGCCCACATTTGGTGGAAAAAAGAATAG
Upstream 100 bases:
>100_bases TGTCGATGGAGCACCAGTCTATGAAAAACTAAAGGCAAATCGCGAAGGACTCTCCTATCAAAAATTGGAGATCTGAACCA TCCTTTTTTGAGGTCAAACT
Downstream 100 bases:
>100_bases GATTGTCTCTCGCAGAAAATAAAGACCACATGATGAATGGTAAATGTGAAAAATTCACTTATTCTCTCTGATACACCCCA ATCATTTTTTTATCTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNDANAEWNENYHLQEIKPRFKSSAQHFQEKENAENMVKRLIEHPSPHIQDQLQSLAFPPGSTVLDIGAGPGTLAVPLTK EGHIVTVVEPSKAMKDAMEQYKQYCGVKADIPRIEKLWENVDPAEIGTYDYVISSFALGVPDLKKALMKMNAVANKEVHI FWFLNPQSWSQIKKDLYTLLYQEDYPDWMSYANVVWQALYQENIYANLTVHARTDKDRYKNIDEVVSMYVRQFSVTDEIQ RNIIENYLNEHLTMQNDGWYTLPNNGKYAHIWWKKE
Sequences:
>Translated_276_residues MNDANAEWNENYHLQEIKPRFKSSAQHFQEKENAENMVKRLIEHPSPHIQDQLQSLAFPPGSTVLDIGAGPGTLAVPLTK EGHIVTVVEPSKAMKDAMEQYKQYCGVKADIPRIEKLWENVDPAEIGTYDYVISSFALGVPDLKKALMKMNAVANKEVHI FWFLNPQSWSQIKKDLYTLLYQEDYPDWMSYANVVWQALYQENIYANLTVHARTDKDRYKNIDEVVSMYVRQFSVTDEIQ RNIIENYLNEHLTMQNDGWYTLPNNGKYAHIWWKKE >Mature_276_residues MNDANAEWNENYHLQEIKPRFKSSAQHFQEKENAENMVKRLIEHPSPHIQDQLQSLAFPPGSTVLDIGAGPGTLAVPLTK EGHIVTVVEPSKAMKDAMEQYKQYCGVKADIPRIEKLWENVDPAEIGTYDYVISSFALGVPDLKKALMKMNAVANKEVHI FWFLNPQSWSQIKKDLYTLLYQEDYPDWMSYANVVWQALYQENIYANLTVHARTDKDRYKNIDEVVSMYVRQFSVTDEIQ RNIIENYLNEHLTMQNDGWYTLPNNGKYAHIWWKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 32190; Mature: 32190
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDANAEWNENYHLQEIKPRFKSSAQHFQEKENAENMVKRLIEHPSPHIQDQLQSLAFPP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC GSTVLDIGAGPGTLAVPLTKEGHIVTVVEPSKAMKDAMEQYKQYCGVKADIPRIEKLWEN CCCEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC VDPAEIGTYDYVISSFALGVPDLKKALMKMNAVANKEVHIFWFLNPQSWSQIKKDLYTLL CCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH YQEDYPDWMSYANVVWQALYQENIYANLTVHARTDKDRYKNIDEVVSMYVRQFSVTDEIQ HHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHH RNIIENYLNEHLTMQNDGWYTLPNNGKYAHIWWKKE HHHHHHHHHHCCEECCCCEEECCCCCCEEEEEEECC >Mature Secondary Structure MNDANAEWNENYHLQEIKPRFKSSAQHFQEKENAENMVKRLIEHPSPHIQDQLQSLAFPP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC GSTVLDIGAGPGTLAVPLTKEGHIVTVVEPSKAMKDAMEQYKQYCGVKADIPRIEKLWEN CCCEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC VDPAEIGTYDYVISSFALGVPDLKKALMKMNAVANKEVHIFWFLNPQSWSQIKKDLYTLL CCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH YQEDYPDWMSYANVVWQALYQENIYANLTVHARTDKDRYKNIDEVVSMYVRQFSVTDEIQ HHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHH RNIIENYLNEHLTMQNDGWYTLPNNGKYAHIWWKKE HHHHHHHHHHCCEECCCCEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]