| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485145
Identifier: 124485145
GI number: 124485145
Start: 301921
End: 302478
Strand: Reverse
Name: 124485145
Synonym: Mlab_0318
Alternate gene names: NA
Gene position: 302478-301921 (Counterclockwise)
Preceding gene: 124485149
Following gene: 124485144
Centisome position: 16.76
GC content: 47.13
Gene sequence:
>558_bases ATGGCCTGTCTATGGGCAGTATGGATTATGATACCGGCATACATTCCAAATCCTGCCGCAGCTTTGCTCGGCGGAGGGAC ACCAGTCGATTTCGGTAAATGCGCCAAAGACGGACGGAGGATCCTTGGAGATGGAAAAACCTGGCGCGGATTGATCGGCG GTATTGTCGTTGGTATCATATTCGGATTAATGCAGATCTTTCTGTATAATTACTTCAATCTGGAATTCCTGCCGAAACAG ACGATAATCACCGTATGTGCCCTCGCCACAGGAGCACTTCTCGGAGATATGGTCAAAAGCTACTTCAAGCGCAGATTGGG AAAAGACCGGGGAGCCAAATGGCCGATCGCGGATATGTATGATATGGTTGTTGGATCCCTTGTTCTGATGACACTCGCAT TACTCGTGACAGGGAATCTCAATTGGTTCACCGAAAATTTCGACTCGGTCGGATTCCTGATCGCGACCATTATTGCCATC CTCATACTATCACCTCTATTACATAGAGGAACAAATATTATCGGATACTTACTCGGGTTAAAGGACGTACCATGGTAA
Upstream 100 bases:
>100_bases TGGTTAACTCCCTTGAAATATAATTATTATAGTAATTCGCGTTTAACTATAAAAGAATGAGAGTGAGAGTTTGATAACAG ATATTTTAACGACTGTGGGG
Downstream 100 bases:
>100_bases ACAGAATATTAGACCTTCTGATTCAATATAAGGCAGTGGAATTCGGGGATTTCACCCTCGCGTCCGGTGCTCAAAGCAAA TACTACATCGATGTAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MACLWAVWIMIPAYIPNPAAALLGGGTPVDFGKCAKDGRRILGDGKTWRGLIGGIVVGIIFGLMQIFLYNYFNLEFLPKQ TIITVCALATGALLGDMVKSYFKRRLGKDRGAKWPIADMYDMVVGSLVLMTLALLVTGNLNWFTENFDSVGFLIATIIAI LILSPLLHRGTNIIGYLLGLKDVPW
Sequences:
>Translated_185_residues MACLWAVWIMIPAYIPNPAAALLGGGTPVDFGKCAKDGRRILGDGKTWRGLIGGIVVGIIFGLMQIFLYNYFNLEFLPKQ TIITVCALATGALLGDMVKSYFKRRLGKDRGAKWPIADMYDMVVGSLVLMTLALLVTGNLNWFTENFDSVGFLIATIIAI LILSPLLHRGTNIIGYLLGLKDVPW >Mature_184_residues ACLWAVWIMIPAYIPNPAAALLGGGTPVDFGKCAKDGRRILGDGKTWRGLIGGIVVGIIFGLMQIFLYNYFNLEFLPKQT IITVCALATGALLGDMVKSYFKRRLGKDRGAKWPIADMYDMVVGSLVLMTLALLVTGNLNWFTENFDSVGFLIATIIAIL ILSPLLHRGTNIIGYLLGLKDVPW
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002726 [H]
Pfam domain/function: PF01864 DUF46 [H]
EC number: NA
Molecular weight: Translated: 20253; Mature: 20121
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACLWAVWIMIPAYIPNPAAALLGGGTPVDFGKCAKDGRRILGDGKTWRGLIGGIVVGII CHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FGLMQIFLYNYFNLEFLPKQTIITVCALATGALLGDMVKSYFKRRLGKDRGAKWPIADMY HHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DMVVGSLVLMTLALLVTGNLNWFTENFDSVGFLIATIIAILILSPLLHRGTNIIGYLLGL HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KDVPW CCCCC >Mature Secondary Structure ACLWAVWIMIPAYIPNPAAALLGGGTPVDFGKCAKDGRRILGDGKTWRGLIGGIVVGII HHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FGLMQIFLYNYFNLEFLPKQTIITVCALATGALLGDMVKSYFKRRLGKDRGAKWPIADMY HHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DMVVGSLVLMTLALLVTGNLNWFTENFDSVGFLIATIIAILILSPLLHRGTNIIGYLLGL HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KDVPW CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA