Click here to switch to the map view.

The map label for this gene is yjjU [H]

Identifier: 124485126

GI number: 124485126

Start: 281330

End: 282187

Strand: Reverse

Name: yjjU [H]

Synonym: Mlab_0299

Alternate gene names: 124485126

Gene position: 282187-281330 (Counterclockwise)

Preceding gene: 124485127

Following gene: 124485125

Centisome position: 15.63

GC content: 50.12

Gene sequence:

>858_bases
ATGAGTAAAAGCGGGCTGATCGTCGAAGGAGGGGGGATGAAGTGTGCATACAGTGCAGGCATCCTCGACCGGTTTTTGGA
TGACGGAATTACTTTCGACGAATGCATTGGTGTGTCGGCCGGGTCCGGCAATCTTGCATCCTATCTCGCAAACCAGCGGG
AGAGAAACCTGCATTTCTATACGATATACCAGAATCACCCCGAGTATCTTGGAATGAAGAACTATCTGAAGCACGGTTCA
TACTTCAATCTGCAGTACATCTACGGCACGATCACCAACTCGACCGGCATCGATCCGGTGGATTATCAGGCACTGACGGC
AAATCCCGCGGAGTATTATCTGACGGCGACCAACGCAAAAACCGGCGAAGCCGAATACTTATCCAAAGAGGACATGAAAA
AGGATGATTTTCGCGCCATCATGGCGAGCTGCGCGATCCCGGTAGTGTGCAAACCAATCGAACTGAACGGTAAATTATAT
TTCGACGGCGGGGTTTCCGATTCGATTCCGGTGCAGAAGGCACTCGACGACGGCTGCGATAAACTGGTGGTGATTCTGGA
AAACCCGCGAAGTTTCCACCGTCAGCCCCAGAAATATAAACCGTTCTATCATCTTATTTTGCGAAACTATCCGGAGATCG
TCAAGAAAATCGACAGACGGCATCTCGAGTATCACAAGGTGATAGCCTATGTCAAAAAACTGGAGGAGGAGGGACGTGCA
TTCGTCTTTGCTCCGTCCCATGCTGGCAAGGTGAAAACAACGACCAAAGACTCAGAGGATATCCACGAGCAGTATGATCT
CGGCATCGCCGATTATGACGCGAGACAGGATGAGCTGAAGGCGTTTCTAAGGGTATGA

Upstream 100 bases:

>100_bases
CGAGTACTTCAGACCATAATCACTTTTTTTACATGAAATACCCGTGATCCCGAAATAAATACAGTAGTATTAAGTGAATA
TCTCGTGTATAAGAATACTA

Downstream 100 bases:

>100_bases
TGATTGAGACAGACAGACTGATCCTTCGTCAGATCGTTGATTCGGATGCTGAAGATATTTTTGCCTATTCACGGGGGCCG
AACACCGGTCGGGATGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSKSGLIVEGGGMKCAYSAGILDRFLDDGITFDECIGVSAGSGNLASYLANQRERNLHFYTIYQNHPEYLGMKNYLKHGS
YFNLQYIYGTITNSTGIDPVDYQALTANPAEYYLTATNAKTGEAEYLSKEDMKKDDFRAIMASCAIPVVCKPIELNGKLY
FDGGVSDSIPVQKALDDGCDKLVVILENPRSFHRQPQKYKPFYHLILRNYPEIVKKIDRRHLEYHKVIAYVKKLEEEGRA
FVFAPSHAGKVKTTTKDSEDIHEQYDLGIADYDARQDELKAFLRV

Sequences:

>Translated_285_residues
MSKSGLIVEGGGMKCAYSAGILDRFLDDGITFDECIGVSAGSGNLASYLANQRERNLHFYTIYQNHPEYLGMKNYLKHGS
YFNLQYIYGTITNSTGIDPVDYQALTANPAEYYLTATNAKTGEAEYLSKEDMKKDDFRAIMASCAIPVVCKPIELNGKLY
FDGGVSDSIPVQKALDDGCDKLVVILENPRSFHRQPQKYKPFYHLILRNYPEIVKKIDRRHLEYHKVIAYVKKLEEEGRA
FVFAPSHAGKVKTTTKDSEDIHEQYDLGIADYDARQDELKAFLRV
>Mature_284_residues
SKSGLIVEGGGMKCAYSAGILDRFLDDGITFDECIGVSAGSGNLASYLANQRERNLHFYTIYQNHPEYLGMKNYLKHGSY
FNLQYIYGTITNSTGIDPVDYQALTANPAEYYLTATNAKTGEAEYLSKEDMKKDDFRAIMASCAIPVVCKPIELNGKLYF
DGGVSDSIPVQKALDDGCDKLVVILENPRSFHRQPQKYKPFYHLILRNYPEIVKKIDRRHLEYHKVIAYVKKLEEEGRAF
VFAPSHAGKVKTTTKDSEDIHEQYDLGIADYDARQDELKAFLRV

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=269, Percent_Identity=24.5353159851301, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32258; Mature: 32127

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSGLIVEGGGMKCAYSAGILDRFLDDGITFDECIGVSAGSGNLASYLANQRERNLHFY
CCCCCEEEECCCCEEEHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEE
TIYQNHPEYLGMKNYLKHGSYFNLQYIYGTITNSTGIDPVDYQALTANPAEYYLTATNAK
EEECCCCCCCCHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCC
TGEAEYLSKEDMKKDDFRAIMASCAIPVVCKPIELNGKLYFDGGVSDSIPVQKALDDGCD
CCCHHHHCHHCCCHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCHHHHHHCCCC
KLVVILENPRSFHRQPQKYKPFYHLILRNYPEIVKKIDRRHLEYHKVIAYVKKLEEEGRA
EEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FVFAPSHAGKVKTTTKDSEDIHEQYDLGIADYDARQDELKAFLRV
EEEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SKSGLIVEGGGMKCAYSAGILDRFLDDGITFDECIGVSAGSGNLASYLANQRERNLHFY
CCCCEEEECCCCEEEHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEE
TIYQNHPEYLGMKNYLKHGSYFNLQYIYGTITNSTGIDPVDYQALTANPAEYYLTATNAK
EEECCCCCCCCHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCC
TGEAEYLSKEDMKKDDFRAIMASCAIPVVCKPIELNGKLYFDGGVSDSIPVQKALDDGCD
CCCHHHHCHHCCCHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCHHHHHHCCCC
KLVVILENPRSFHRQPQKYKPFYHLILRNYPEIVKKIDRRHLEYHKVIAYVKKLEEEGRA
EEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FVFAPSHAGKVKTTTKDSEDIHEQYDLGIADYDARQDELKAFLRV
EEEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]