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The map label for this gene is rps15p

Identifier: 124485117

GI number: 124485117

Start: 270967

End: 271425

Strand: Reverse

Name: rps15p

Synonym: Mlab_0290

Alternate gene names: 124485117

Gene position: 271425-270967 (Counterclockwise)

Preceding gene: 124485125

Following gene: 124485116

Centisome position: 15.04

GC content: 50.33

Gene sequence:

>459_bases
ATGGCACGAATGCATGCTAGAAGAAGAGGAATTGCATCCTCTGTCAGACCATACAGAAAAGAAGTCCCTGCCTGGTCCAA
CTCCGATGTCAAAGAGATCGAGGGTAAAATCGTCGAGCTGCGCAAAGCAGGTCTTACCTGTGCACAGATCGGTCTCGTTC
TCCGTGACAAACACGGAGTCCCGAACGTAAAACTCGCAACCGGCAAGAGAATCAATGCCATCGTTCGTGAGAACGACCTT
GACACCGACATCCCCGAAGATCTGCGTAACCTTATGCACAAGGCACTCATGATGAGAAAACACCTTGAGCAGAACAGAAA
AGACCTTCACAACAAACGTCAGCTCCAGCTGACCGAAGCGAAGGTCCGCAGACTCGTAAAGTACTATGTTGGTACCAAAC
GCTTACCGCTCGGCTGGGTCTACAAGCCGGAGACTGCAGAGATTCTTCTGTCCAGATAA

Upstream 100 bases:

>100_bases
CGACCATACCTGTCAAATACCAGTATCCGCGAATACGTCGTCAGGTTGGTTCTCCGCCCGGTACGGATGGCGGACAGTCT
CATTCGCGAGGTGATAAATT

Downstream 100 bases:

>100_bases
ATCATCATAACTCATGTCACTTGAAGAAGCCGCCAAAACGATCGCCGACCGCCTGAGAGGAATGGAGTACGTGGAAATGT
ACACCCATCACGATGCGGAC

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDL
DTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLSR

Sequences:

>Translated_152_residues
MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDL
DTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLSR
>Mature_151_residues
ARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDLD
TDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLSR

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family

Homologues:

Organism=Homo sapiens, GI4506685, Length=154, Percent_Identity=45.4545454545455, Blast_Score=134, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17554774, Length=151, Percent_Identity=41.7218543046358, Blast_Score=131, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320269, Length=151, Percent_Identity=43.046357615894, Blast_Score=129, Evalue=2e-31,
Organism=Drosophila melanogaster, GI85724904, Length=151, Percent_Identity=43.046357615894, Blast_Score=132, Evalue=1e-31,
Organism=Drosophila melanogaster, GI17136832, Length=151, Percent_Identity=43.046357615894, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS15_METLZ (A2SQ60)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001029733.1
- ProteinModelPortal:   A2SQ60
- SMR:   A2SQ60
- STRING:   A2SQ60
- GeneID:   4795344
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_0290
- eggNOG:   arNOG07733
- HOGENOM:   HBG747651
- OMA:   IRRLVKY
- PhylomeDB:   A2SQ60
- ProtClustDB:   PRK08561
- BioCyc:   MLAB410358:MLAB_0290-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01343_A
- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068
- Gene3D:   G3DSA:1.10.287.10

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind

EC number: NA

Molecular weight: Translated: 17625; Mature: 17494

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGV
CCCHHHHHHCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEA
CCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRRLVKYYVGTKRLPLGWVYKPETAEILLSR
HHHHHHHHHHCCCCCCCCEEECCCHHHHEECC
>Mature Secondary Structure 
ARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGV
CCHHHHHHCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEA
CCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRRLVKYYVGTKRLPLGWVYKPETAEILLSR
HHHHHHHHHHCCCCCCCCEEECCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA