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The map label for this gene is oppC [H]

Identifier: 124484997

GI number: 124484997

Start: 155905

End: 156810

Strand: Reverse

Name: oppC [H]

Synonym: Mlab_0170

Alternate gene names: 124484997

Gene position: 156810-155905 (Counterclockwise)

Preceding gene: 124484998

Following gene: 124484996

Centisome position: 8.69

GC content: 44.48

Gene sequence:

>906_bases
ATGGGAGAAATAGATCCTTCCGCATTTGAAATCGTTGGAGCAGAATACCAGACATGGGAACCTGAAATAAAAAAAGAATC
TGTATCCAAAAAACTGAGAAAACTCCCATGGATTTCAATAATAGTATTTTCAGCGATCCTTTTTGGCTGTATCTTCGCCC
CCCTGATTGCCAATCATAATCCATCCACGTATTATCTCGACAGTCTCAACGAACCGCCGAACAGTGATTTCTATTTCGGA
ACGGATTCTCTCGGCCGCGATCTGTTTTCAATCATCTGGTACGGCGGACGAACGTCATTGACGGTAGGATTTCTGGGTGC
AGCCATTGTCACACTGATTGGCATAACCTACGGATGTATCAACGGAATGGCGAACACGAGGATCGATACGCTCCTTCAGC
GTGTTGTTGAAATTTTTCATATTATCCCGCAGATCCTTCTGACCATTCTCATCATAACGATACTGGGTCAGCAGAATCCG
ATATCGATATCCTTTGTGATAGCCGTAACTTCGTGGTTTGCTCTCGCGAGAATTGTTAGAAGTGAAGTGCGTCAGATCCG
AACCAACGAATATGTGATAGCTGCGAAATGCTACGGTGCCAGGTTCGAAAGGCTTGTTGTGAAGCATCTCATCCCTAATA
TTATTCCTGCAATCATGTTCGTCGTTGTATCCGGCATTAGTACGTGTATCACGACCGAATCTACCTTAAGTTTCTTAGGA
CTGGGTCTTCCGCTCGATGTTTTATCGTGGGGAAGCATACTGTCGCTTTCAAACCGTGCACTTCTGCTCAATACATGGTG
GGTCATCGTGATTCCCGGAATATTCCTGATCGTCACGCTCTCATGCATAACAACTATCGCAAACTGTTTCAGAAAAGACA
TGAACAAAAAACCGAACAGGCTGTAA

Upstream 100 bases:

>100_bases
TTGTTCTCATCACGGGATCAATGGTGATCATAACAAGTATGTGTGCATATATGATCAACGAAGTCATAGATCCCCGTATG
AAAGACGCAGGAGGTACAAT

Downstream 100 bases:

>100_bases
CACATATTTTTCATTGTGTGTTATTTAATATAATTAAACACATTTATGTAATAACAAATAAAATAAAAATATGACTTATG
GCATACGTTTTGAAAAATCG

Product: beta-propeller repeat-containing DNA gyrase

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MGEIDPSAFEIVGAEYQTWEPEIKKESVSKKLRKLPWISIIVFSAILFGCIFAPLIANHNPSTYYLDSLNEPPNSDFYFG
TDSLGRDLFSIIWYGGRTSLTVGFLGAAIVTLIGITYGCINGMANTRIDTLLQRVVEIFHIIPQILLTILIITILGQQNP
ISISFVIAVTSWFALARIVRSEVRQIRTNEYVIAAKCYGARFERLVVKHLIPNIIPAIMFVVVSGISTCITTESTLSFLG
LGLPLDVLSWGSILSLSNRALLLNTWWVIVIPGIFLIVTLSCITTIANCFRKDMNKKPNRL

Sequences:

>Translated_301_residues
MGEIDPSAFEIVGAEYQTWEPEIKKESVSKKLRKLPWISIIVFSAILFGCIFAPLIANHNPSTYYLDSLNEPPNSDFYFG
TDSLGRDLFSIIWYGGRTSLTVGFLGAAIVTLIGITYGCINGMANTRIDTLLQRVVEIFHIIPQILLTILIITILGQQNP
ISISFVIAVTSWFALARIVRSEVRQIRTNEYVIAAKCYGARFERLVVKHLIPNIIPAIMFVVVSGISTCITTESTLSFLG
LGLPLDVLSWGSILSLSNRALLLNTWWVIVIPGIFLIVTLSCITTIANCFRKDMNKKPNRL
>Mature_300_residues
GEIDPSAFEIVGAEYQTWEPEIKKESVSKKLRKLPWISIIVFSAILFGCIFAPLIANHNPSTYYLDSLNEPPNSDFYFGT
DSLGRDLFSIIWYGGRTSLTVGFLGAAIVTLIGITYGCINGMANTRIDTLLQRVVEIFHIIPQILLTILIITILGQQNPI
SISFVIAVTSWFALARIVRSEVRQIRTNEYVIAAKCYGARFERLVVKHLIPNIIPAIMFVVVSGISTCITTESTLSFLGL
GLPLDVLSWGSILSLSNRALLLNTWWVIVIPGIFLIVTLSCITTIANCFRKDMNKKPNRL

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=29.3436293436293, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787498, Length=261, Percent_Identity=32.5670498084291, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787054, Length=253, Percent_Identity=30.8300395256917, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789889, Length=242, Percent_Identity=26.8595041322314, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788505, Length=184, Percent_Identity=29.3478260869565, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1789964, Length=260, Percent_Identity=29.6153846153846, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787549, Length=253, Percent_Identity=26.0869565217391, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33502; Mature: 33371

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIDPSAFEIVGAEYQTWEPEIKKESVSKKLRKLPWISIIVFSAILFGCIFAPLIANHN
CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PSTYYLDSLNEPPNSDFYFGTDSLGRDLFSIIWYGGRTSLTVGFLGAAIVTLIGITYGCI
CCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NGMANTRIDTLLQRVVEIFHIIPQILLTILIITILGQQNPISISFVIAVTSWFALARIVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
SEVRQIRTNEYVIAAKCYGARFERLVVKHLIPNIIPAIMFVVVSGISTCITTESTLSFLG
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LGLPLDVLSWGSILSLSNRALLLNTWWVIVIPGIFLIVTLSCITTIANCFRKDMNKKPNR
CCCCHHHHCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
L
C
>Mature Secondary Structure 
GEIDPSAFEIVGAEYQTWEPEIKKESVSKKLRKLPWISIIVFSAILFGCIFAPLIANHN
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PSTYYLDSLNEPPNSDFYFGTDSLGRDLFSIIWYGGRTSLTVGFLGAAIVTLIGITYGCI
CCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NGMANTRIDTLLQRVVEIFHIIPQILLTILIITILGQQNPISISFVIAVTSWFALARIVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
SEVRQIRTNEYVIAAKCYGARFERLVVKHLIPNIIPAIMFVVVSGISTCITTESTLSFLG
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LGLPLDVLSWGSILSLSNRALLLNTWWVIVIPGIFLIVTLSCITTIANCFRKDMNKKPNR
CCCCHHHHCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]