| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124484984
Identifier: 124484984
GI number: 124484984
Start: 141670
End: 142587
Strand: Reverse
Name: 124484984
Synonym: Mlab_0156
Alternate gene names: NA
Gene position: 142587-141670 (Counterclockwise)
Preceding gene: 124484987
Following gene: 124484983
Centisome position: 7.9
GC content: 50.0
Gene sequence:
>918_bases ATGACACTGGAAGAAAAGATCACATTCTATTCCCGCGAAGACGCATCCGCGTTTCAGAAGTATCTACGGGAAAAAGGATG TCCGTCACGGATATCCGTCGAGCACAGCTTTTCGGGAACACCCTACTTTGAGGGAAGCATATCGTCAATCCTGCAGCTTA TAGATAAAATACATGCGCGGGAGTCGGACGCCGATCTGGATGAACTCAAAGCTGACCTTCTTGGACGCAAAAAGACCCTC GAGGAGTTTTTCCAGTCGCACAAAGCAGGCGACTGTCTGACGGATGCAACGCCGTCACAACTTCTCGCGCAGGCAGAGTC GATCGATGCGATGGGAGAGGATGTCCAAAAACAGGCAACCGACAAGTTCATGAATGCACTGATGATCCTTGGGACCCTTG AGGACAACGAACTTCTGGAGGTATCCGAGGAGAAAGAGTGCTACACGCTTCTTGGAACAAAGGAGGCAGGCGATCTCCGC GTTATGTATGCATATACCGATTTTAACGGCGTAACGGAAGAGGATCTGCACGAAACGGAACTCGTCAGTCACATCAGGAC CTCGTCGACCACGGAATTCATTATCACCGCTGGTGTTGAGATCCTGTTCGTATCCGATATCGAGGATCTGACCGAGATGC TGGATCATATGGATGTCGAAGATGACGAGGCTGCGCGATTCGTGGATGCGGTCTTTTTCAAACAGGCTCTGATCGGTCAG ATACACAAACTTGTTTCGGAGGGAAAACAGAGTGAAGCGGATCTGCTCGCTGCATTGGATGCCCCGGCCTTCCCGCTCGA AGGGACTAAAGATGTGATTTCCTTTGATATATCCCCTGAGTATCTGTCAGGAGTCGTCTCCGACCTGAGAAAACAGGGTA TTCTGTCAGGGAAAGACGGTAAGATTAAAAGCAGTTAA
Upstream 100 bases:
>100_bases TAATGTTTGTGCTCCCTGTATAAAACATTATGCTCCATGTTAACAAGTGTCATAGTCGAGCAGAATTAATAACCATGAAG AGAACATACCAGATATCCAG
Downstream 100 bases:
>100_bases CGTCATATAATACTGTTAGGTGGGGGATGTGGAGTACAAAGCAGTGTGGATACTGCTGCCCTCACCAATTGATCTGAATA CTATTTTGCAGGAATTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTLEEKITFYSREDASAFQKYLREKGCPSRISVEHSFSGTPYFEGSISSILQLIDKIHARESDADLDELKADLLGRKKTL EEFFQSHKAGDCLTDATPSQLLAQAESIDAMGEDVQKQATDKFMNALMILGTLEDNELLEVSEEKECYTLLGTKEAGDLR VMYAYTDFNGVTEEDLHETELVSHIRTSSTTEFIITAGVEILFVSDIEDLTEMLDHMDVEDDEAARFVDAVFFKQALIGQ IHKLVSEGKQSEADLLAALDAPAFPLEGTKDVISFDISPEYLSGVVSDLRKQGILSGKDGKIKSS
Sequences:
>Translated_305_residues MTLEEKITFYSREDASAFQKYLREKGCPSRISVEHSFSGTPYFEGSISSILQLIDKIHARESDADLDELKADLLGRKKTL EEFFQSHKAGDCLTDATPSQLLAQAESIDAMGEDVQKQATDKFMNALMILGTLEDNELLEVSEEKECYTLLGTKEAGDLR VMYAYTDFNGVTEEDLHETELVSHIRTSSTTEFIITAGVEILFVSDIEDLTEMLDHMDVEDDEAARFVDAVFFKQALIGQ IHKLVSEGKQSEADLLAALDAPAFPLEGTKDVISFDISPEYLSGVVSDLRKQGILSGKDGKIKSS >Mature_304_residues TLEEKITFYSREDASAFQKYLREKGCPSRISVEHSFSGTPYFEGSISSILQLIDKIHARESDADLDELKADLLGRKKTLE EFFQSHKAGDCLTDATPSQLLAQAESIDAMGEDVQKQATDKFMNALMILGTLEDNELLEVSEEKECYTLLGTKEAGDLRV MYAYTDFNGVTEEDLHETELVSHIRTSSTTEFIITAGVEILFVSDIEDLTEMLDHMDVEDDEAARFVDAVFFKQALIGQI HKLVSEGKQSEADLLAALDAPAFPLEGTKDVISFDISPEYLSGVVSDLRKQGILSGKDGKIKSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33832; Mature: 33701
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEEKITFYSREDASAFQKYLREKGCPSRISVEHSFSGTPYFEGSISSILQLIDKIHAR CCCHHHHHEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC ESDADLDELKADLLGRKKTLEEFFQSHKAGDCLTDATPSQLLAQAESIDAMGEDVQKQAT CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DKFMNALMILGTLEDNELLEVSEEKECYTLLGTKEAGDLRVMYAYTDFNGVTEEDLHETE HHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEEECCCCCCHHHHHHHH LVSHIRTSSTTEFIITAGVEILFVSDIEDLTEMLDHMDVEDDEAARFVDAVFFKQALIGQ HHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IHKLVSEGKQSEADLLAALDAPAFPLEGTKDVISFDISPEYLSGVVSDLRKQGILSGKDG HHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHCCCCCCCCC KIKSS CCCCC >Mature Secondary Structure TLEEKITFYSREDASAFQKYLREKGCPSRISVEHSFSGTPYFEGSISSILQLIDKIHAR CCHHHHHEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCC ESDADLDELKADLLGRKKTLEEFFQSHKAGDCLTDATPSQLLAQAESIDAMGEDVQKQAT CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DKFMNALMILGTLEDNELLEVSEEKECYTLLGTKEAGDLRVMYAYTDFNGVTEEDLHETE HHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEEECCCCCCHHHHHHHH LVSHIRTSSTTEFIITAGVEILFVSDIEDLTEMLDHMDVEDDEAARFVDAVFFKQALIGQ HHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IHKLVSEGKQSEADLLAALDAPAFPLEGTKDVISFDISPEYLSGVVSDLRKQGILSGKDG HHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHCCCCCCCCC KIKSS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA