| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124484972
Identifier: 124484972
GI number: 124484972
Start: 131960
End: 132583
Strand: Reverse
Name: 124484972
Synonym: Mlab_0144
Alternate gene names: NA
Gene position: 132583-131960 (Counterclockwise)
Preceding gene: 124484973
Following gene: 124484969
Centisome position: 7.35
GC content: 48.4
Gene sequence:
>624_bases ATGAGAAATATTATTATTGTCGGGATCGTGACCATCGCCGTCATTTTTGCGGCCGGATGTATGGCCCCCGGAGCAACGCC CGACCCAATCGTCGGAAGCTGGAATGCAGATGAACCCGAACTGTTCAACGATACTGCGTTCACGTATATTTTCAATGCAG ACGGGACCGGGAATGCCGTCGAGACGTATGAAGATCCTGTAGTAACCACTGATGTATACAATCTTACCTGGAAATCGACC GGTAACGGGACCTATGAGGCGGCATTTGCACATCAGCTGATTTTATCAGAGGATGAGAAGGTCTTTACCATTTTAGGTGA CGGATCAGGTGACCAATTCACGGGAGACGGTTTTGTCGGCGTCTGGACGAAGGATACGCCGGAGGAATTCGACGGCGTGC TCTATGAAGCGAAGTTTGTATTTTATGAAAACACGACCGGGTTGTTTTCCTGGTATTATCAGGATAATGCCACGCTGGAA TCCAGCTATCCACTTGTGTGGTCGGTAGAAAACGGCGTTTACCGTTATTCGTATCCGGATGATGTTTCAATATTCACTCT CGGAACCGATGGGATCCTTACCGAGACCTGGGATAACACAACCTATACCTATACTCGGGTATAG
Upstream 100 bases:
>100_bases GAGATAGAGTTTTTTTCGTTTACTTTTTTTTTGGAATGTTTCTCTGAGAATACTGCAGTCTCGGCAAATTCAAGTGCGAT GATCGCATACTATTCAGAGT
Downstream 100 bases:
>100_bases GAACCACTTTTTTTTGATTTTTTCAGAGGAGTTACGCGATGCCGGTGTGAGGGCCGGAAAGTGTACGGCTGAGTGCGGAA GCATGAATTTATTTAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRNIIIVGIVTIAVIFAAGCMAPGATPDPIVGSWNADEPELFNDTAFTYIFNADGTGNAVETYEDPVVTTDVYNLTWKST GNGTYEAAFAHQLILSEDEKVFTILGDGSGDQFTGDGFVGVWTKDTPEEFDGVLYEAKFVFYENTTGLFSWYYQDNATLE SSYPLVWSVENGVYRYSYPDDVSIFTLGTDGILTETWDNTTYTYTRV
Sequences:
>Translated_207_residues MRNIIIVGIVTIAVIFAAGCMAPGATPDPIVGSWNADEPELFNDTAFTYIFNADGTGNAVETYEDPVVTTDVYNLTWKST GNGTYEAAFAHQLILSEDEKVFTILGDGSGDQFTGDGFVGVWTKDTPEEFDGVLYEAKFVFYENTTGLFSWYYQDNATLE SSYPLVWSVENGVYRYSYPDDVSIFTLGTDGILTETWDNTTYTYTRV >Mature_207_residues MRNIIIVGIVTIAVIFAAGCMAPGATPDPIVGSWNADEPELFNDTAFTYIFNADGTGNAVETYEDPVVTTDVYNLTWKST GNGTYEAAFAHQLILSEDEKVFTILGDGSGDQFTGDGFVGVWTKDTPEEFDGVLYEAKFVFYENTTGLFSWYYQDNATLE SSYPLVWSVENGVYRYSYPDDVSIFTLGTDGILTETWDNTTYTYTRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22963; Mature: 22963
Theoretical pI: Translated: 3.56; Mature: 3.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIIIVGIVTIAVIFAAGCMAPGATPDPIVGSWNADEPELFNDTAFTYIFNADGTGNAV CCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEECCCEEEEEEECCCCCCCE ETYEDPVVTTDVYNLTWKSTGNGTYEAAFAHQLILSEDEKVFTILGDGSGDQFTGDGFVG EECCCCEEEEEEEEEEEECCCCCEEEHHEEEEEEECCCCEEEEEEECCCCCCCCCCCEEE VWTKDTPEEFDGVLYEAKFVFYENTTGLFSWYYQDNATLESSYPLVWSVENGVYRYSYPD EECCCCHHHHCCEEEEEEEEEEECCCCEEEEEEECCCEECCCCCEEEEECCCEEEECCCC DVSIFTLGTDGILTETWDNTTYTYTRV CEEEEEECCCCEEEECCCCCEEEEEEC >Mature Secondary Structure MRNIIIVGIVTIAVIFAAGCMAPGATPDPIVGSWNADEPELFNDTAFTYIFNADGTGNAV CCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEECCCEEEEEEECCCCCCCE ETYEDPVVTTDVYNLTWKSTGNGTYEAAFAHQLILSEDEKVFTILGDGSGDQFTGDGFVG EECCCCEEEEEEEEEEEECCCCCEEEHHEEEEEEECCCCEEEEEEECCCCCCCCCCCEEE VWTKDTPEEFDGVLYEAKFVFYENTTGLFSWYYQDNATLESSYPLVWSVENGVYRYSYPD EECCCCHHHHCCEEEEEEEEEEECCCCEEEEEEECCCEECCCCCEEEEECCCEEEECCCC DVSIFTLGTDGILTETWDNTTYTYTRV CEEEEEECCCCEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA