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The map label for this gene is yigC [C]

Identifier: 124484886

GI number: 124484886

Start: 58106

End: 59344

Strand: Reverse

Name: yigC [C]

Synonym: Mlab_0057

Alternate gene names: 124484886

Gene position: 59344-58106 (Counterclockwise)

Preceding gene: 124484887

Following gene: 124484885

Centisome position: 3.29

GC content: 52.78

Gene sequence:

>1239_bases
ATGAGAGAATTTATTTTGCAGATGAAAAAAGCAGGGCTTGTCGAAGAGATCAAAGACCCGGTCTCTTCCATCTACGAAGC
CCCGAAGCTTGCCTTCCGGACAAATAAGATGCTGGAGTTTTCGAATATGGATGGTCACCGCTGTGTGATGAACACCATCT
TCGACCGGGATTCGCTCTCGGTAGCATTGAATATTCCAAAGGAGAGGCTCGTAAAAACACTCGCCGCCTGCACCTACGCG
GGAAAAACCCGGGATGCGGGTACTCTTCAGTTCGAAAAGGCCGACCTCTCAAAGATCCCGATCATGAAGCATTTCCCAAA
GGATGCAGGAAAATATCTGACCTCGGGGATCGTGTTTTCAGAATGGAACGGGGTCACCAACGCCTCGATCCACCGCCTGC
AGGTCCTGGATGAAACCCATCTGATCGGCAGGATCGTCGAAGGACGCCACACCTACAAACTGATGAAGCAGGCTTTTTCA
AAAGGAGAAAAACTGCCGATCGCAATAGTGATCGGACCCCACCCCGCCGTAACCTTTGCCGCATCCACCCGCGTTCCCGA
GGGAAAAGAGATGAACTATGCGGCCGAGATCCTCGGAAAAGAGCTGGATCTATTCACCTGTCCAAACGGAATCCAGGTTC
CCGATGCAGAAATCATTCTTTACGGCTATCTGACGCCTGACCTCCATGAAGAAGGGCCGTTCGTCGACATCAGCGGGACC
TACGATCCCGTTAGGATGCAGCCCGTGCTTGAGATCGTCGGCATGCACACAAAGCCCGATTTCATCTATCACGGGATTGT
TCCTGCCGGCGCAGAACACAAAATGCTCATGGGAGCTCCCTATGAACCGAGGATCTATCAGGCAGTTTCGGGCGTCACGA
ACGTAAAAGACGTTTACCTGACACCGGGAGGAGCAGGATACTTCCATGCGGTCATCCAGATCAAAAAGATGACCGACGGG
GACGGGAAAAATGCCATCATGGCAGCATTCGCCGCCCACACCTCACTCAAACATGTCGTGATCGTCGATGAAGACATCAA
CATCTACGACCCCTCGGATGTGGAGTTCGCGATCGCAACCCGCGTCCGGGCAGATACGGATGTCATGATTATTTCGGGTG
TCAGGGGATCCTCCCTTGATCCCTGCAGGATCGGAGACGGCATGAATGTGAAGGCAGGGGTGGATGCGACCATTCCGCTC
GGTTTGGAAGATGAGTTTATCCGTGCTGAATGGGATTGA

Upstream 100 bases:

>100_bases
ATACCCATCCGAATACTCTGGACGAGCTTGCAGATATGATCGCCGCACGGATTCTTGATCACTTCGGGATCGAACATACC
ATTGGAACTCGGTGGAAAGA

Downstream 100 bases:

>100_bases
ATAATAAGGAAGTGAACAATGGAACTAGACAAATATGATCAGGCGCTGCTGAACGGAGAATACGGCGAAACCAAACAAAA
AATGATGGAGATCCTCCTCG

Product: hypothetical protein

Products: phenol; CO2

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MREFILQMKKAGLVEEIKDPVSSIYEAPKLAFRTNKMLEFSNMDGHRCVMNTIFDRDSLSVALNIPKERLVKTLAACTYA
GKTRDAGTLQFEKADLSKIPIMKHFPKDAGKYLTSGIVFSEWNGVTNASIHRLQVLDETHLIGRIVEGRHTYKLMKQAFS
KGEKLPIAIVIGPHPAVTFAASTRVPEGKEMNYAAEILGKELDLFTCPNGIQVPDAEIILYGYLTPDLHEEGPFVDISGT
YDPVRMQPVLEIVGMHTKPDFIYHGIVPAGAEHKMLMGAPYEPRIYQAVSGVTNVKDVYLTPGGAGYFHAVIQIKKMTDG
DGKNAIMAAFAAHTSLKHVVIVDEDINIYDPSDVEFAIATRVRADTDVMIISGVRGSSLDPCRIGDGMNVKAGVDATIPL
GLEDEFIRAEWD

Sequences:

>Translated_412_residues
MREFILQMKKAGLVEEIKDPVSSIYEAPKLAFRTNKMLEFSNMDGHRCVMNTIFDRDSLSVALNIPKERLVKTLAACTYA
GKTRDAGTLQFEKADLSKIPIMKHFPKDAGKYLTSGIVFSEWNGVTNASIHRLQVLDETHLIGRIVEGRHTYKLMKQAFS
KGEKLPIAIVIGPHPAVTFAASTRVPEGKEMNYAAEILGKELDLFTCPNGIQVPDAEIILYGYLTPDLHEEGPFVDISGT
YDPVRMQPVLEIVGMHTKPDFIYHGIVPAGAEHKMLMGAPYEPRIYQAVSGVTNVKDVYLTPGGAGYFHAVIQIKKMTDG
DGKNAIMAAFAAHTSLKHVVIVDEDINIYDPSDVEFAIATRVRADTDVMIISGVRGSSLDPCRIGDGMNVKAGVDATIPL
GLEDEFIRAEWD
>Mature_412_residues
MREFILQMKKAGLVEEIKDPVSSIYEAPKLAFRTNKMLEFSNMDGHRCVMNTIFDRDSLSVALNIPKERLVKTLAACTYA
GKTRDAGTLQFEKADLSKIPIMKHFPKDAGKYLTSGIVFSEWNGVTNASIHRLQVLDETHLIGRIVEGRHTYKLMKQAFS
KGEKLPIAIVIGPHPAVTFAASTRVPEGKEMNYAAEILGKELDLFTCPNGIQVPDAEIILYGYLTPDLHEEGPFVDISGT
YDPVRMQPVLEIVGMHTKPDFIYHGIVPAGAEHKMLMGAPYEPRIYQAVSGVTNVKDVYLTPGGAGYFHAVIQIKKMTDG
DGKNAIMAAFAAHTSLKHVVIVDEDINIYDPSDVEFAIATRVRADTDVMIISGVRGSSLDPCRIGDGMNVKAGVDATIPL
GLEDEFIRAEWD

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=359, Percent_Identity=28.6908077994429, Blast_Score=124, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6320748, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.61

Molecular weight: Translated: 45397; Mature: 45397

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFILQMKKAGLVEEIKDPVSSIYEAPKLAFRTNKMLEFSNMDGHRCVMNTIFDRDSLS
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHHHHHHCCCCCEE
VALNIPKERLVKTLAACTYAGKTRDAGTLQFEKADLSKIPIMKHFPKDAGKYLTSGIVFS
EEEECCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHCCEEEE
EWNGVTNASIHRLQVLDETHLIGRIVEGRHTYKLMKQAFSKGEKLPIAIVIGPHPAVTFA
CCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE
ASTRVPEGKEMNYAAEILGKELDLFTCPNGIQVPDAEIILYGYLTPDLHEEGPFVDISGT
ECCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
YDPVRMQPVLEIVGMHTKPDFIYHGIVPAGAEHKMLMGAPYEPRIYQAVSGVTNVKDVYL
CCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCEEEE
TPGGAGYFHAVIQIKKMTDGDGKNAIMAAFAAHTSLKHVVIVDEDINIYDPSDVEFAIAT
CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEEE
RVRADTDVMIISGVRGSSLDPCRIGDGMNVKAGVDATIPLGLEDEFIRAEWD
EEECCCCEEEEECCCCCCCCCEECCCCCEEECCCCEEEECCCCCCEEEECCC
>Mature Secondary Structure
MREFILQMKKAGLVEEIKDPVSSIYEAPKLAFRTNKMLEFSNMDGHRCVMNTIFDRDSLS
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCHHHHHHHCCCCCEE
VALNIPKERLVKTLAACTYAGKTRDAGTLQFEKADLSKIPIMKHFPKDAGKYLTSGIVFS
EEEECCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHCCEEEE
EWNGVTNASIHRLQVLDETHLIGRIVEGRHTYKLMKQAFSKGEKLPIAIVIGPHPAVTFA
CCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE
ASTRVPEGKEMNYAAEILGKELDLFTCPNGIQVPDAEIILYGYLTPDLHEEGPFVDISGT
ECCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
YDPVRMQPVLEIVGMHTKPDFIYHGIVPAGAEHKMLMGAPYEPRIYQAVSGVTNVKDVYL
CCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCEEEE
TPGGAGYFHAVIQIKKMTDGDGKNAIMAAFAAHTSLKHVVIVDEDINIYDPSDVEFAIAT
CCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEEE
RVRADTDVMIISGVRGSSLDPCRIGDGMNVKAGVDATIPLGLEDEFIRAEWD
EEECCCCEEEEECCCCCCCCCEECCCCCEEECCCCEEEECCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxybenzoate

Specific reaction: 4-hydroxybenzoate = phenol + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]