Click here to switch to the map view.

The map label for this gene is 124484884

Identifier: 124484884

GI number: 124484884

Start: 56210

End: 56902

Strand: Reverse

Name: 124484884

Synonym: Mlab_0055

Alternate gene names: NA

Gene position: 56902-56210 (Counterclockwise)

Preceding gene: 124484885

Following gene: 124484881

Centisome position: 3.15

GC content: 49.64

Gene sequence:

>693_bases
ATGAGTCTCTTAGATAAAATCTCCCCGTTTGAAAGAAAAGATCTTCTGATCGCCTGGCTTGTCCTCGGTGTTGCCTTTAC
GTTAGGCATCAACGGCGGATTTGCATTACTTACCGACTATCAAAATATAACCGTAGAAGGACTTCTGATAACCTTCCTCG
TATCGCTGATCGCGGTCGGACTTTCCTTCGTGCTTCACGAACTTGCCCACAAATTCACCGCCATGAGGTTCGGTTACTGG
GCAGAATTCAGAAAAAGCACGCAGATGCTGATCATCGCCGTTGTCGTTGCGGCCATCACGGGAATCGTATTTGCCGCACC
CGGAGCAACACTCATCAACACGGCCGGTCGCGAGATGACCAAAAAAGAGAACGGACTCATCTCCATCGCCGGACCTCTGA
CGAATCTGGTCCTGATCATCCCGTTTATCATCATCATGATCATCGGATTCATGATGTCGCCTTCGACAGGAATCGTCCTC
TTCACTCTCCCGGGATTTTTGTTCTATCTGGGATTGATCGGCTTCCAGGTCAATGCGATGCTAGCATTCTTCAACATGCT
GCCGGTCGGGCCGCTTGACGGAAAAAAGATTATGAAATGGAACCCAGTCGTCTTCGGCGTTGTTATCGCCGTATCGCTTG
TTCTGCTCTATCTCGCACTCGTGCCGACCGTGATTCTCTCGCTTTTTGTCTAA

Upstream 100 bases:

>100_bases
GAACTCCGGAAAAGCATTCACGTATCTCCCGGGAATGTGCAAAGCGACGCCGCTTTTAGGCACTCTCGAGGATTGTGTCC
GTGCAGGATGTGGTGAATAA

Downstream 100 bases:

>100_bases
ATGCGAACGCTGACCTCACCCGAGGTCAGTGTCCTGATTTTTCCGTCGGCTTCGACAACCAGCCCGCCTTTGTCGTCGAT
GTCAACTGCTTTTGCAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSLLDKISPFERKDLLIAWLVLGVAFTLGINGGFALLTDYQNITVEGLLITFLVSLIAVGLSFVLHELAHKFTAMRFGYW
AEFRKSTQMLIIAVVVAAITGIVFAAPGATLINTAGREMTKKENGLISIAGPLTNLVLIIPFIIIMIIGFMMSPSTGIVL
FTLPGFLFYLGLIGFQVNAMLAFFNMLPVGPLDGKKIMKWNPVVFGVVIAVSLVLLYLALVPTVILSLFV

Sequences:

>Translated_230_residues
MSLLDKISPFERKDLLIAWLVLGVAFTLGINGGFALLTDYQNITVEGLLITFLVSLIAVGLSFVLHELAHKFTAMRFGYW
AEFRKSTQMLIIAVVVAAITGIVFAAPGATLINTAGREMTKKENGLISIAGPLTNLVLIIPFIIIMIIGFMMSPSTGIVL
FTLPGFLFYLGLIGFQVNAMLAFFNMLPVGPLDGKKIMKWNPVVFGVVIAVSLVLLYLALVPTVILSLFV
>Mature_229_residues
SLLDKISPFERKDLLIAWLVLGVAFTLGINGGFALLTDYQNITVEGLLITFLVSLIAVGLSFVLHELAHKFTAMRFGYWA
EFRKSTQMLIIAVVVAAITGIVFAAPGATLINTAGREMTKKENGLISIAGPLTNLVLIIPFIIIMIIGFMMSPSTGIVLF
TLPGFLFYLGLIGFQVNAMLAFFNMLPVGPLDGKKIMKWNPVVFGVVIAVSLVLLYLALVPTVILSLFV

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24968; Mature: 24837

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDKISPFERKDLLIAWLVLGVAFTLGINGGFALLTDYQNITVEGLLITFLVSLIAVG
CCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
LSFVLHELAHKFTAMRFGYWAEFRKSTQMLIIAVVVAAITGIVFAAPGATLINTAGREMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHH
KKENGLISIAGPLTNLVLIIPFIIIMIIGFMMSPSTGIVLFTLPGFLFYLGLIGFQVNAM
HHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
LAFFNMLPVGPLDGKKIMKWNPVVFGVVIAVSLVLLYLALVPTVILSLFV
HHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLLDKISPFERKDLLIAWLVLGVAFTLGINGGFALLTDYQNITVEGLLITFLVSLIAVG
CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
LSFVLHELAHKFTAMRFGYWAEFRKSTQMLIIAVVVAAITGIVFAAPGATLINTAGREMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHH
KKENGLISIAGPLTNLVLIIPFIIIMIIGFMMSPSTGIVLFTLPGFLFYLGLIGFQVNAM
HHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
LAFFNMLPVGPLDGKKIMKWNPVVFGVVIAVSLVLLYLALVPTVILSLFV
HHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]