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The map label for this gene is vorD [H]

Identifier: 124484876

GI number: 124484876

Start: 49502

End: 49756

Strand: Reverse

Name: vorD [H]

Synonym: Mlab_0047

Alternate gene names: 124484876

Gene position: 49756-49502 (Counterclockwise)

Preceding gene: 124484877

Following gene: 124484869

Centisome position: 2.76

GC content: 52.55

Gene sequence:

>255_bases
ATGAGCAGAATGCCGAAAATAACCATCAGCGTCCCCCATGAGGGAGGAGCCGGTCTTACCGGGACGTGGAGAACGTTCCG
TCCGATCGTGGACAGGGAAACCTGCAATCACTGCGGGATCTGTGCGATGTTCTGCCCCGACGCGGTCATCGATCCGGATA
CACTCGAGATCGATCTTGTTTACTGCAAAGGCTGCGGCATTTGTTCCAACGAATGCCCGAAAAAGTGTATAAAAATGGTC
AGAGAAGAACACTGA

Upstream 100 bases:

>100_bases
GCCTCTTCAGCCGGGAGTCGGGAGTGAAGGCGATCACCGAGACGTTTGCCGATCCAAGAAACACTGCGGCTGCAAAAGCG
GCTTATGAGGAGGTCATCGT

Downstream 100 bases:

>100_bases
CCTTTTTCTTTTTTTCTTTGTTTTAATCCTCGAACAGTGCATCGAGCATATGTTTCGGATCATCCAGAAAGCGTTTGGTG
ATTTGGTATGATTCGGTCTT

Product: uroporphyrin-III C-methyltransferase

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit delta; 2-oxoisovalerate oxidoreductase delta chain [H]

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MSRMPKITISVPHEGGAGLTGTWRTFRPIVDRETCNHCGICAMFCPDAVIDPDTLEIDLVYCKGCGICSNECPKKCIKMV
REEH

Sequences:

>Translated_84_residues
MSRMPKITISVPHEGGAGLTGTWRTFRPIVDRETCNHCGICAMFCPDAVIDPDTLEIDLVYCKGCGICSNECPKKCIKMV
REEH
>Mature_83_residues
SRMPKITISVPHEGGAGLTGTWRTFRPIVDRETCNHCGICAMFCPDAVIDPDTLEIDLVYCKGCGICSNECPKKCIKMVR
EEH

Specific function: Unknown

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 9330; Mature: 9199

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
15.5 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
14.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMPKITISVPHEGGAGLTGTWRTFRPIVDRETCNHCGICAMFCPDAVIDPDTLEIDLV
CCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
YCKGCGICSNECPKKCIKMVREEH
EECCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SRMPKITISVPHEGGAGLTGTWRTFRPIVDRETCNHCGICAMFCPDAVIDPDTLEIDLV
CCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
YCKGCGICSNECPKKCIKMVREEH
EECCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]