| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124484862
Identifier: 124484862
GI number: 124484862
Start: 36164
End: 38395
Strand: Reverse
Name: 124484862
Synonym: Mlab_0033
Alternate gene names: NA
Gene position: 38395-36164 (Counterclockwise)
Preceding gene: 124484863
Following gene: 124484861
Centisome position: 2.13
GC content: 30.47
Gene sequence:
>2232_bases ATGATATCAGAAATATACATCAAGGATCTTGCGACCTATACTGGTGAAGGGGGATGCATGCTCCCCAAAAAAATCAATAT GATCTATGGAGGGAATGGATCTGGAAAAAGTACTCTCGCTAAATATCTCAAGGATTGCTCAATATCAATAAATAGTAAAA TTATCTGGGAAAATAATCGAAAAATACCTGTTTTAATTTACAACAAAGAATTTATTGAAGCTAATTTTAATAGAGATGAT CCTATTAAAGGGATTTTCACCTTGGGAGTGGAATCAAAAGAAGCGCGGGAATTTATTGCAAAAAAACAGGGCGAGATAGA TGATCATAAGAAGAAAATTGATGGTTGCAATAAGAATATTGAGGATTTAAATACTAGAAAACAGAAAAAAGTGGAAATAT TTTATGAACGTTGCTGGAGGGAAGAAAAAAAATATGGCGAGACGTATAGTAAAGCATTAGTTGGAACTAGAGGAAGTAAA ACAACATTTGCAATAAAATGCTTGGAAGAATCCGAAAATTTTGATGAGAATAATGTTAGTTCGTTGGATGACATCAAATC GAGATATATAGCAGCGTTCGATAATGATAATAAAAGAGAATATGGCACCATCAACAAAATTGACGTTAAAGATATTTCAG ATATTGAAAAATGTCCATTATTAATGGAAGTAATCACTGGGACTTCAGATTCAGAAATCGGAGAACTAATTGAATATTTA AATAATAGTGATTGGGTGAGAGAGGGAGTAAGTTATGCTGAGAAATCTAATGGAAAATGCCCATATTGTCAACGTACACT TGACTCTTCAATTCAAAAAGAAATAAAGTCATTTTTTGATAAGGCATTTGATAATAAGTATAATGCTCTCAAGAACATGA AAGAAGATTATATATCTCATATTTCATCATGTCTCGAAAAATTAGATAGCATAATAGATAGCCCAATTCCGGGTTTAGAT TATAACGATATCGAGAAAAACAGGGAGGCACTTTCTATAATATTTAAATCAAACAAAATAATCATTGAAAATAAAATTAC ATTTCCATCAAAATCAGTGGAAATTGAAAGTGTGATTCCTTTAATTAACAATATCAATGATAATATTGACAATATAAATG TATCAATTAATAAAAATAATGCTATTATACATGATCTGAAAAATGAGAAAGAGCATTGTAAAAAATTAATCTGGCAATAT CTTGTTAATGAACTTATAGATCCAATTACCGAATATAAGAAGGAAATGAGTGGATTTGAAAAAGGAAAGGCTAGTTTAAC TAAGAATATTGATGGGCATCAAGAGCGCATAAAAAATATCAAGAAAGAGATTTCAGAGAAACAAAAAAACCTCATAAATG TGACGAAGACGGTTGATGATATTGAGGATATATTAACGAAAGTTGGCTTTAGTGGCTTCAAATTAGATGTAAATCCTGAT GATGAATATAAGAATACGTATCGGATAATTCGACCAAACGGAGAGAATGCTCATGATACATTGAGCGACGGGGAAAGAAA CTTTATCACTTTTTTGTATTTTTATTATCTTATTCAAGGTCAAAGTGACCCAAATAATCTTGAAAATGACAAAATAGTGA TTGTTGATGACCCTATTTCAAGTTTAGATAGTGGAGTTCTCTTTATTGTAAGTACTTTGGTGAGGAATCTGTTTGAATAC TGTAAAAATGATAATCATGGAATTCGGCAAGTGTTTGTCTTAACTCATAATGTCTATTTCCACAAAGAAGTAGCATATAG ATTAGAAATAGATTATCCCAATATAGCTGGTTTTTGGATGGTAAAAAAAGCACAGAACATATCTAAAATAGAGAATAAAG ATAAGGATCCAATAGAAAATTCATATACATTACTTTGGTCTGAGATACAAGATACATCGAACATCAGTCCTGCAATTCAA AATACTTTGCGAAGAATATTGGAATCATACTTTAAAATAATAGGAAATGTAGACTATCATAAAGTTATAGATCAATTTGA AGGAACTGATAAAATAATTTGTAAATCCCTCTTATCGTATCTTAATGCCGGTTCTCACGGGATTTTTGATGATTTTGATA TCTGTCCGGATTCTGAATCTGTTCAGAGATATCTAGAAATATTTAAACAAATATTTGTAAAGTTAAATCAAATTGACCAT TATAATATGATGATGGAAAAATCAACTTCAACGATATCCAGTGAAACTACAACTGAAGTGACATCTTCATAG
Upstream 100 bases:
>100_bases TTATCGTATAGAAAATTAATGGTATCAATCGAGTATTATTTGATTTTAGTCTTCTGAAATTATTTTCATTTTGGAAATGT TATACTGACAGGTAACTTCT
Downstream 100 bases:
>100_bases AATTATCTCAGAAATGTAGTATATCCAATGGATTCAGCCAATGTATGTACAGACCTAAAACGGGATATGAGTAGATTTAT AGGCCATACAGGAGGAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MISEIYIKDLATYTGEGGCMLPKKINMIYGGNGSGKSTLAKYLKDCSISINSKIIWENNRKIPVLIYNKEFIEANFNRDD PIKGIFTLGVESKEAREFIAKKQGEIDDHKKKIDGCNKNIEDLNTRKQKKVEIFYERCWREEKKYGETYSKALVGTRGSK TTFAIKCLEESENFDENNVSSLDDIKSRYIAAFDNDNKREYGTINKIDVKDISDIEKCPLLMEVITGTSDSEIGELIEYL NNSDWVREGVSYAEKSNGKCPYCQRTLDSSIQKEIKSFFDKAFDNKYNALKNMKEDYISHISSCLEKLDSIIDSPIPGLD YNDIEKNREALSIIFKSNKIIIENKITFPSKSVEIESVIPLINNINDNIDNINVSINKNNAIIHDLKNEKEHCKKLIWQY LVNELIDPITEYKKEMSGFEKGKASLTKNIDGHQERIKNIKKEISEKQKNLINVTKTVDDIEDILTKVGFSGFKLDVNPD DEYKNTYRIIRPNGENAHDTLSDGERNFITFLYFYYLIQGQSDPNNLENDKIVIVDDPISSLDSGVLFIVSTLVRNLFEY CKNDNHGIRQVFVLTHNVYFHKEVAYRLEIDYPNIAGFWMVKKAQNISKIENKDKDPIENSYTLLWSEIQDTSNISPAIQ NTLRRILESYFKIIGNVDYHKVIDQFEGTDKIICKSLLSYLNAGSHGIFDDFDICPDSESVQRYLEIFKQIFVKLNQIDH YNMMMEKSTSTISSETTTEVTSS
Sequences:
>Translated_743_residues MISEIYIKDLATYTGEGGCMLPKKINMIYGGNGSGKSTLAKYLKDCSISINSKIIWENNRKIPVLIYNKEFIEANFNRDD PIKGIFTLGVESKEAREFIAKKQGEIDDHKKKIDGCNKNIEDLNTRKQKKVEIFYERCWREEKKYGETYSKALVGTRGSK TTFAIKCLEESENFDENNVSSLDDIKSRYIAAFDNDNKREYGTINKIDVKDISDIEKCPLLMEVITGTSDSEIGELIEYL NNSDWVREGVSYAEKSNGKCPYCQRTLDSSIQKEIKSFFDKAFDNKYNALKNMKEDYISHISSCLEKLDSIIDSPIPGLD YNDIEKNREALSIIFKSNKIIIENKITFPSKSVEIESVIPLINNINDNIDNINVSINKNNAIIHDLKNEKEHCKKLIWQY LVNELIDPITEYKKEMSGFEKGKASLTKNIDGHQERIKNIKKEISEKQKNLINVTKTVDDIEDILTKVGFSGFKLDVNPD DEYKNTYRIIRPNGENAHDTLSDGERNFITFLYFYYLIQGQSDPNNLENDKIVIVDDPISSLDSGVLFIVSTLVRNLFEY CKNDNHGIRQVFVLTHNVYFHKEVAYRLEIDYPNIAGFWMVKKAQNISKIENKDKDPIENSYTLLWSEIQDTSNISPAIQ NTLRRILESYFKIIGNVDYHKVIDQFEGTDKIICKSLLSYLNAGSHGIFDDFDICPDSESVQRYLEIFKQIFVKLNQIDH YNMMMEKSTSTISSETTTEVTSS >Mature_743_residues MISEIYIKDLATYTGEGGCMLPKKINMIYGGNGSGKSTLAKYLKDCSISINSKIIWENNRKIPVLIYNKEFIEANFNRDD PIKGIFTLGVESKEAREFIAKKQGEIDDHKKKIDGCNKNIEDLNTRKQKKVEIFYERCWREEKKYGETYSKALVGTRGSK TTFAIKCLEESENFDENNVSSLDDIKSRYIAAFDNDNKREYGTINKIDVKDISDIEKCPLLMEVITGTSDSEIGELIEYL NNSDWVREGVSYAEKSNGKCPYCQRTLDSSIQKEIKSFFDKAFDNKYNALKNMKEDYISHISSCLEKLDSIIDSPIPGLD YNDIEKNREALSIIFKSNKIIIENKITFPSKSVEIESVIPLINNINDNIDNINVSINKNNAIIHDLKNEKEHCKKLIWQY LVNELIDPITEYKKEMSGFEKGKASLTKNIDGHQERIKNIKKEISEKQKNLINVTKTVDDIEDILTKVGFSGFKLDVNPD DEYKNTYRIIRPNGENAHDTLSDGERNFITFLYFYYLIQGQSDPNNLENDKIVIVDDPISSLDSGVLFIVSTLVRNLFEY CKNDNHGIRQVFVLTHNVYFHKEVAYRLEIDYPNIAGFWMVKKAQNISKIENKDKDPIENSYTLLWSEIQDTSNISPAIQ NTLRRILESYFKIIGNVDYHKVIDQFEGTDKIICKSLLSYLNAGSHGIFDDFDICPDSESVQRYLEIFKQIFVKLNQIDH YNMMMEKSTSTISSETTTEVTSS
Specific function: Unknown
COG id: COG4694
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85516; Mature: 85516
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISEIYIKDLATYTGEGGCMLPKKINMIYGGNGSGKSTLAKYLKDCSISINSKIIWENNR CCCHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHCCCEECCEEEEECCC KIPVLIYNKEFIEANFNRDDPIKGIFTLGVESKEAREFIAKKQGEIDDHKKKIDGCNKNI EEEEEEECHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCH EDLNTRKQKKVEIFYERCWREEKKYGETYSKALVGTRGSKTTFAIKCLEESENFDENNVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC SLDDIKSRYIAAFDNDNKREYGTINKIDVKDISDIEKCPLLMEVITGTSDSEIGELIEYL HHHHHHHHEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NNSDWVREGVSYAEKSNGKCPYCQRTLDSSIQKEIKSFFDKAFDNKYNALKNMKEDYISH CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ISSCLEKLDSIIDSPIPGLDYNDIEKNREALSIIFKSNKIIIENKITFPSKSVEIESVIP HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCHHHHHH LINNINDNIDNINVSINKNNAIIHDLKNEKEHCKKLIWQYLVNELIDPITEYKKEMSGFE HHHCCCCCCCEEEEEEECCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGKASLTKNIDGHQERIKNIKKEISEKQKNLINVTKTVDDIEDILTKVGFSGFKLDVNPD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC DEYKNTYRIIRPNGENAHDTLSDGERNFITFLYFYYLIQGQSDPNNLENDKIVIVDDPIS CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH SLDSGVLFIVSTLVRNLFEYCKNDNHGIRQVFVLTHNVYFHKEVAYRLEIDYPNIAGFWM HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCHHHH VKKAQNISKIENKDKDPIENSYTLLWSEIQDTSNISPAIQNTLRRILESYFKIIGNVDYH HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH KVIDQFEGTDKIICKSLLSYLNAGSHGIFDDFDICPDSESVQRYLEIFKQIFVKLNQIDH HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHH YNMMMEKSTSTISSETTTEVTSS HHHHHHHCCCHHCCCCCHHCCCC >Mature Secondary Structure MISEIYIKDLATYTGEGGCMLPKKINMIYGGNGSGKSTLAKYLKDCSISINSKIIWENNR CCCHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHCCCEECCEEEEECCC KIPVLIYNKEFIEANFNRDDPIKGIFTLGVESKEAREFIAKKQGEIDDHKKKIDGCNKNI EEEEEEECHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCH EDLNTRKQKKVEIFYERCWREEKKYGETYSKALVGTRGSKTTFAIKCLEESENFDENNVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC SLDDIKSRYIAAFDNDNKREYGTINKIDVKDISDIEKCPLLMEVITGTSDSEIGELIEYL HHHHHHHHEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH NNSDWVREGVSYAEKSNGKCPYCQRTLDSSIQKEIKSFFDKAFDNKYNALKNMKEDYISH CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ISSCLEKLDSIIDSPIPGLDYNDIEKNREALSIIFKSNKIIIENKITFPSKSVEIESVIP HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCHHHHHH LINNINDNIDNINVSINKNNAIIHDLKNEKEHCKKLIWQYLVNELIDPITEYKKEMSGFE HHHCCCCCCCEEEEEEECCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGKASLTKNIDGHQERIKNIKKEISEKQKNLINVTKTVDDIEDILTKVGFSGFKLDVNPD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC DEYKNTYRIIRPNGENAHDTLSDGERNFITFLYFYYLIQGQSDPNNLENDKIVIVDDPIS CCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHH SLDSGVLFIVSTLVRNLFEYCKNDNHGIRQVFVLTHNVYFHKEVAYRLEIDYPNIAGFWM HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCHHHH VKKAQNISKIENKDKDPIENSYTLLWSEIQDTSNISPAIQNTLRRILESYFKIIGNVDYH HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH KVIDQFEGTDKIICKSLLSYLNAGSHGIFDDFDICPDSESVQRYLEIFKQIFVKLNQIDH HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHH YNMMMEKSTSTISSETTTEVTSS HHHHHHHCCCHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA