| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is lacA [H]
Identifier: 124484861
GI number: 124484861
Start: 35450
End: 36055
Strand: Reverse
Name: lacA [H]
Synonym: Mlab_0032
Alternate gene names: 124484861
Gene position: 36055-35450 (Counterclockwise)
Preceding gene: 124484862
Following gene: 124484860
Centisome position: 2.0
GC content: 49.34
Gene sequence:
>606_bases ATGACGGAAGAGGAGAGGATATTTGCAGGCCGGCTCTTTGACGCACGTTCAAAGGAACTTCGCGATTTGAAGCATAAGGC CCATGTTCTCTGTCAGAAATTCAATGCTTTGGACGAGTACGATGAGGGCCGTCTGCCGATCATCAGAGAGTTTATCGGAA GAATCGGTGAGAATTATTATTTCCAGGGACCGATCCAGTTCAATTACGGCTGTCATACGTTTATCGGGGAGAATTTCTTT GCGAATTTCAATACGACGATCATGGACGACGGCCGGATTTTTATCGGGGACAATGTGATGTTCGGCCCGAATGTTTCTCT GATGGCGACCTCACATCCGCTGATCCCAACGGAGCGGACAGCTATGCGGTATGAGGACGGACATGTTTCGATGTCCGAAT ACGCAGAAGAGATCTATATCGGGAATAATGTCTGGCTCGCATGCAATGTTGTTGTGCTGGGCGGCGTGCATATCGGGGAT AATGCGGTGATCGGGGCCGGAAGCGTTGTAACGAAGGATGTTCCGGAAAATTTTGTTGCTTTCGGGAATCCGTGTAAGCC GGTCAGACGGATCACGGAGAAGGATTCGAAAATGAATCTGCTGTGA
Upstream 100 bases:
>100_bases CAGAAATGTAGTATATCCAATGGATTCAGCCAATGTATGTACAGACCTAAAACGGGATATGAGTAGATTTATAGGCCATA CAGGAGGAGGTTTTATTTAA
Downstream 100 bases:
>100_bases GTGGGCAGAGAATTGACTGATTGAGCCAGAGCGATTATATATTTCCGGAACGAAAGACCCATCATGCAGAAATCAAAAGC GCTTCTGTGGATTACCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: GAT; Thiogalactoside acetyltransferase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTEEERIFAGRLFDARSKELRDLKHKAHVLCQKFNALDEYDEGRLPIIREFIGRIGENYYFQGPIQFNYGCHTFIGENFF ANFNTTIMDDGRIFIGDNVMFGPNVSLMATSHPLIPTERTAMRYEDGHVSMSEYAEEIYIGNNVWLACNVVVLGGVHIGD NAVIGAGSVVTKDVPENFVAFGNPCKPVRRITEKDSKMNLL
Sequences:
>Translated_201_residues MTEEERIFAGRLFDARSKELRDLKHKAHVLCQKFNALDEYDEGRLPIIREFIGRIGENYYFQGPIQFNYGCHTFIGENFF ANFNTTIMDDGRIFIGDNVMFGPNVSLMATSHPLIPTERTAMRYEDGHVSMSEYAEEIYIGNNVWLACNVVVLGGVHIGD NAVIGAGSVVTKDVPENFVAFGNPCKPVRRITEKDSKMNLL >Mature_200_residues TEEERIFAGRLFDARSKELRDLKHKAHVLCQKFNALDEYDEGRLPIIREFIGRIGENYYFQGPIQFNYGCHTFIGENFFA NFNTTIMDDGRIFIGDNVMFGPNVSLMATSHPLIPTERTAMRYEDGHVSMSEYAEEIYIGNNVWLACNVVVLGGVHIGDN AVIGAGSVVTKDVPENFVAFGNPCKPVRRITEKDSKMNLL
Specific function: May assist cellular detoxification by acetylating non- metabolizable pyranosides, thereby preventing their reentry into the cell [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786537, Length=196, Percent_Identity=43.3673469387755, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI1786664, Length=191, Percent_Identity=36.1256544502618, Blast_Score=127, Evalue=3e-31, Organism=Escherichia coli, GI1788367, Length=152, Percent_Identity=28.9473684210526, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322243, Length=194, Percent_Identity=41.2371134020619, Blast_Score=153, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.18 [H]
Molecular weight: Translated: 22720; Mature: 22589
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEERIFAGRLFDARSKELRDLKHKAHVLCQKFNALDEYDEGRLPIIREFIGRIGENYY CCCCHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCE FQGPIQFNYGCHTFIGENFFANFNTTIMDDGRIFIGDNVMFGPNVSLMATSHPLIPTERT EECCEEECCCCCEECCCCEEECCCCEEEECCEEEECCCEEECCCEEEEECCCCCCCCCCC AMRYEDGHVSMSEYAEEIYIGNNVWLACNVVVLGGVHIGDNAVIGAGSVVTKDVPENFVA EEEECCCCEEHHHHHHHEEECCCEEEEEEEEEEECEEECCCCEEECCCEEECCCCCHHHH FGNPCKPVRRITEKDSKMNLL CCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TEEERIFAGRLFDARSKELRDLKHKAHVLCQKFNALDEYDEGRLPIIREFIGRIGENYY CCCHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCE FQGPIQFNYGCHTFIGENFFANFNTTIMDDGRIFIGDNVMFGPNVSLMATSHPLIPTERT EECCEEECCCCCEECCCCEEECCCCEEEECCEEEECCCEEECCCEEEEECCCCCCCCCCC AMRYEDGHVSMSEYAEEIYIGNNVWLACNVVVLGGVHIGDNAVIGAGSVVTKDVPENFVA EEEECCCCEEHHHHHHHEEECCCEEEEEEEEEEECEEECCCCEEECCCEEECCCCCHHHH FGNPCKPVRRITEKDSKMNLL CCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3922433; 3901000; 9278503; 6444453; 11937062 [H]