| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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Identifier: 124266528
GI number:
Start: 1439025
End: 1442111
Strand: Direct
Name: Not Available
Synonym: Mpe_A1335
Alternate gene names: NA
Gene position: NA
Preceding gene: 124266527
Following gene: 124266530
Centisome position: NA
GC content: NA
Gene sequence:
>3087_bases ATGAACCTGTCGGAGCTGTTCATCCGCCGTCCGGTGATGACGGTGCTGCTGAACCTGGCCATGGTGGTGGCCGGCGTCAT CGCCTACCGGCAGATCCCGATCGCCGCACTGCCGAGCTACAACACCCCGGTGATCAACGTCACGGCCTCGCTGCCCGGTG CCAGCCCCGAGACCATGGCCACCTCGGTGGCGCTGCAGTTGGAGAAGCAGTTCTCGACGATCCCCTCGCTCAGCATGATC AGCTCGACCAGCACGCTGGGCACCACCTCGCTGACGCTGGAGTTCGACGAGGGCCGCGACATCGACGCGGCGGCGGTCGA CGTGCAGGCGGCGCTGCTGCGTGCCGAACGCACGTTGCCGCAGGACATGACCGCGCCGCCGTCCTATCGCAAGGTCAACC CGGCCGACGCGCCGGTGCTGCTGATGGCGATGACCTCGCCCTCGCTGAACCTGTCGGACCTGAACGACTACGCCGAGCAC CTGATCTCGCCCGCGCTGTCCACGCTGCCTGGCGTGGCGCAGGTCAACATCTTCGGCCAGCGACGCTTCGCGGTGCGGGT GAGGGTGCACCCGCAGGCGCTGGCCGCGCGCGACATCGCGATCGAGGAGCTGAGTGCGGCGCTCGCCACCGCCAATGCCA ACACGCCGGTCGGCACGCTCGAGGGCGACCGCCAGACGCTGACGGTGCAGGCCAACCGGCAGCTGCGCAACGCGGCCGAG TTCTCCGACCTGATCGTCAGCAGCAAGAACGGCAACACGGTGCGGCTGCGCGACGTGGCGACCGTGGAGGACAGCTACGA GAGCGTCAAGACCTCGGCCAACTTCAACGGCGAGGCGTCGATCACGCTGGCCGTGCAGCGCCAGCCCGACGCCAACACCG TGGCGGTGGTGGATGCGGTCAAGGCCGCGCTGCCGGGCTTCACCGCACAGCTGCCGCAGTCGATCCAGCTGAGCCTGCTG AACGACCGCTCCACCTCGATCCGCGAGGCACTGCACGACGTGAACCTCACGCTGCTCGGCACCATCGTGCTGGTGGTGCT GGTGATCTTTCTCTTCCTGCGGAGAGCGGTCGCGACGGTGATCCCGACGCTGTCGCTGCCGGTGTCGCTGATCGGTGCGG TGGCGCTGCTGTGGGCCGGCGGCTACAGCCTCGACAACATCTCGCTGCTGGGCCTGACGCTGGCCGTGGGCCTGGTGGTG GACGACGCGATCGTGATGCTCGAGAACATCATGCACCACGTCGAGCAGGGCATGGACCCGTTCGAGGCGGCGTTGAAGGG CTCGCGCGAGGTCGGCTTCACCATCATCTCGATCTCGACCTCGCTGGTCGCGGTGTTCATCCCGATCTTCTTCATGCCCG GCGTGATCGGCCTGCTGTTCCACGAATTCGCGGTGATCGTCTCGCTGGCCATCCTGGTGTCGGCCTTCGTCTCGCTGACC CTGGTGCCCATGCTGGCCGGACGCTACCTGAAGCCCGAGGCCACGCAGCGCCCGCCGGGTGCGCTGGTGCGCGGCTTCGA GCGCGGCTTCGAGGCCGTCACGCGCTGGTACACGCGCTCGCTCGACCTCGCGCTGCGGCACCGCCGTCTGATGCTGGGTG TGGGCGTGCTGACCTTCGCGCTGACCGCGCTGATGTTCGTCACCATTCCCAAGGGATTCTTCCCGGAGGAGGACATCGGC CAGATCCGCGCCTCCACCGAAGCCGCCGAGGACACCTCGTTCGCGGCGATGGTGAAGCTGCAGGACCAGGCGGTGCAGGT GATGCTGGCCGACCCGAACGTGCTGAGCGTGAACTCGGTCAACGGCGGCAGCGGCACGCAGAACACGGGCCGCATGTTCA TCAACCTCAAGCCGCGCGGCGAGCGCCTGCCCATGAAGCAGGTGGTGGAAGGGCTGCGCAAGAAGTTGAGTCAGGTGGCC GGTATCACCGTCTACCTGCAGCCGGTGCAGAACCTGCAGCTCGGCGGGCGCCCCAGCAAGAGCCGCTACCAGTACATCCT GCAGAGCGTGAAGGCCGATGAGCTGAACGACTGGGCGGCCAGGCTGCAGGAGAAGCTGCGCGCCGATCCGCGCTTCCGCG ACGTCACCTCCGACTCACAGCTCAAGGGACTGCAAGCCTCGCTGAAGATCGACCGCGACAAGGCCAACACGCTGGGCGTG TCGGTCGACTCGATCCGCAACGCGCTGTTCAGCGCCTTCGGCGAGCGCCAGGTCGCCACCATTTACACCACCGCCGACAG CTACCAGGTGATCATGGAAGTGGCGCCCGACGCCAAGCGCGACGAGAGCGCCTTCGACGGCATCTACCTGCGCAGCAGCA ACGGTGCACTGGTGCCGCTGAACAGCTTCGCGACGGTCGAGCGCACGCTGGGGCCGACCTCGGTGAACCACGTCGGGCAG CTGCAGGCGGTGACGGTGTCGTTCAACCTCGCGCCGGGCGTGCCGCTCGGCGATGCCACCCGGCAGCTCGAGGCCTACGG GCAGGAGATCCGCCTGCCGGCATCGGTGATCACCAGCTACGGCGGTGACGCAGCGGTGTTCAAGACCTCGCAGGGCAGCC AGGCCATCCTCATCGTTGCGGCGTTGCTGGTGATCTACGTGCTGCTGGGCGTGCTGTACGAGAGCTACATCCACCCGCTG ACCATCCTGGCCGGCCTGCCATCGGCCGCGGTGGGGGCCTTGCTGATGCTGGAGTTCTTCGGGCAGGACCTGACGCTGAT CGCGACCATCGGCATCCTGCTGCTGATCGGCATCGTGAAGAAGAACGCGATCATGATGATCGACTTCGCGCTCGACGCGC AGCGCCATCAGGGCATGGCGCCCGAGGCAGCGATTCGCGAAGCCTGCGTGCGGCGCTTCCGGCCGATCACGATGACCACG CTGGCCGCGCTGATGGGCGCGCTGCCCATCGCGCTGGGCATCGGCGCCGGCGCCGAGCTGCGGCAGCCGCTGGGTCTGGC GGTGGTGGGCGGCCTGCTGTTCTCGCAGGCGATCACGCTCTACCTCACGCCGGTGATCTACCTCTACCTCGACCGCTACA GCGGTCGTGGGCCGATCCAGACGCCGGAGGTCGTGGAAGCCCGCTGA
Upstream 100 bases:
>100_bases AGAACCTGCGGCCCGGTGCGGCGGTGGTCGAACAGGCCCCGGCGGCGGCCGCAGCGAGCCGGCCGGCGCGGCGCGTGGCC GCCGCGTCGGAGCCTCGGCC
Downstream 100 bases:
>100_bases GGGGGGCGGCAGCGAGGGGGCGTCGGGTCTGGATCAGCGCCGCTTGCTGCCGCCCAGCAGGCTGCCCAGCACGCCGCGGA TGATCTCGCGGCCCACCGTG
Product: putative RND efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1028_residues MNLSELFIRRPVMTVLLNLAMVVAGVIAYRQIPIAALPSYNTPVINVTASLPGASPETMATSVALQLEKQFSTIPSLSMI SSTSTLGTTSLTLEFDEGRDIDAAAVDVQAALLRAERTLPQDMTAPPSYRKVNPADAPVLLMAMTSPSLNLSDLNDYAEH LISPALSTLPGVAQVNIFGQRRFAVRVRVHPQALAARDIAIEELSAALATANANTPVGTLEGDRQTLTVQANRQLRNAAE FSDLIVSSKNGNTVRLRDVATVEDSYESVKTSANFNGEASITLAVQRQPDANTVAVVDAVKAALPGFTAQLPQSIQLSLL NDRSTSIREALHDVNLTLLGTIVLVVLVIFLFLRRAVATVIPTLSLPVSLIGAVALLWAGGYSLDNISLLGLTLAVGLVV DDAIVMLENIMHHVEQGMDPFEAALKGSREVGFTIISISTSLVAVFIPIFFMPGVIGLLFHEFAVIVSLAILVSAFVSLT LVPMLAGRYLKPEATQRPPGALVRGFERGFEAVTRWYTRSLDLALRHRRLMLGVGVLTFALTALMFVTIPKGFFPEEDIG QIRASTEAAEDTSFAAMVKLQDQAVQVMLADPNVLSVNSVNGGSGTQNTGRMFINLKPRGERLPMKQVVEGLRKKLSQVA GITVYLQPVQNLQLGGRPSKSRYQYILQSVKADELNDWAARLQEKLRADPRFRDVTSDSQLKGLQASLKIDRDKANTLGV SVDSIRNALFSAFGERQVATIYTTADSYQVIMEVAPDAKRDESAFDGIYLRSSNGALVPLNSFATVERTLGPTSVNHVGQ LQAVTVSFNLAPGVPLGDATRQLEAYGQEIRLPASVITSYGGDAAVFKTSQGSQAILIVAALLVIYVLLGVLYESYIHPL TILAGLPSAAVGALLMLEFFGQDLTLIATIGILLLIGIVKKNAIMMIDFALDAQRHQGMAPEAAIREACVRRFRPITMTT LAALMGALPIALGIGAGAELRQPLGLAVVGGLLFSQAITLYLTPVIYLYLDRYSGRGPIQTPEVVEAR
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA