| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yfiQ [H]
Identifier: 124266204
GI number: 124266204
Start: 1072798
End: 1075554
Strand: Direct
Name: yfiQ [H]
Synonym: Mpe_A1011
Alternate gene names: 124266204
Gene position: 1072798-1075554 (Clockwise)
Preceding gene: 124266203
Following gene: 124266205
Centisome position: 26.53
GC content: 69.71
Gene sequence:
>2757_bases ATGCCCCGAAGGTCGCTGCATGCCGCGGTGCACGCCCGGCGCTCCGATCGGCGCAGACTGGACCTCATGGACAAGCACTT CCTCACCCCGCTCTTTTCGCCCGAATCCATCATCGTGCTGGCCGGGGCGCCCGACGACCCGACCGGCCAGACGCCCCAGG CCCGGGTGCTGCACCAGGCCCTGCGGGCACAGCCCTATGCCGGCGCGCTGCAGTTCCTGGACATCCATGCGACCGGCACG CTGGCCGAGCTGGCGCAGACCCGGGCCGACCTGGCCGTCATCGCGCTGCCGCCCCAGCAGGTGGCCTCCGCACTGGAGGT CGCAGGAAGGCTCGCCTGTCGCTCGGCGCTGGTGGTGTCCAGCGGCATCGGCGCCGAGGCCGCGGCGACCCTGAAGAAGA TCGCACAGCGCGAGGGCATCCATCTGCTGGGACCCAACGGGCTGGGGTTCCAGCGTCCTGCGCTGCAGCTCAACGCCAGC GCGGCAGGGCCGCTGGCCAAGCCCGGTTCACTGGCGCTGGTGTCGCAGTCGGGGGCGCTCACCACCTCGGTGCTCGACTG GGCCAGCACCAACGCGGTGGGCTTCTCCAGCGTCGTGTCCCTGGGCCCGAACACCTCGGTGGACATCGCTCAGGTGCTGG ACTACCTGGCCAACGACGCGCAGACGCACAGCATCGTTGTCTACGTCGAGGGCATCTCGAGCGCGCGCCATTTCATGAGC GCGCTGCGCTCGGCCGCCAAGGCCAAGCCGGTGGTGGTGCTGAAGGCCGGTCGCAAGCCGGCCGGCAACGAGGCCGCGCA GACCCACAGCGGCGCCATCGTCGGCAGCGACGACGTGTTCGACGCCGCGCTGCGCCGTGCCGGCGCGGTGCGGGTGCGCT CCTTCGTCGAGCTGTTCTCGGCCGCGAAATGCCTGGCCTCGCGCTACCGCCCGGTGGGTCGGCGCCTCGCGATCGTGACC AACGGCGGCGGGCCCGGCGTGCTGGCGGCGGACTGGGTCAACGAGCTGTACCTGCACCTGGGCCGGCTGTCGGCCGAGTC GGCCGCTGCACTGGCGCCGCAGCTGCCGCCGCTGGCCTCGCTGTCGGACCTGATCGATCTGTCGGAAGACGCCGGCCCCG AGCACTACCGCGCCGCCATCGATGCTGCCGGCAACGACACGCAGATCGACGGCGTGCTGACCGTCTACTCGCCCAAGGTC GGCGTCGATGCGGCGGACATCGCGGGCGCGCTGGTGGAGGTCAAGCACACGATGGGCAAGCCGTTGCTGTCATGCTGGAT GGGCGATGCGTCGGTCGGCGCGGCGCGCGAGCTTCTGAACGAGGCAGGCATCCCCGGCTTCCGCACGCCGGAGGCGGCGG TCGGGGCCTTCGGCAACATCGCCTCGTTCTACCAGAACCAGCTGCTGCTGCAGCAGACGCCTTCGCCGCTGTCCACGCTG GCCAAGCCCGACATCGAGGCGGCGCGGCTGGTGATCGAGAGCGTGCTGGCCGAGCGCCGCAAGGTGCTGACGGAGATGGA GTCGAAGACGCTGCTGTCGTCGTTCCACATCCCGGTCACCAACACCATCCTCGCGCGCAGCGCCAACGAGGCGATGATGA TCGCCACCCAGCTGGGCTTCCCGGTCGCGCTGAAGATCGATTCGTCCGACATCAGCCACAAGTCCGACGTGGAGGGTGTG GCGCTCAACATCATGAACGGCGCGAGCGCGCGCGACACCTATACCGACATGGTGGAGCGGGTGGCGCGGCTGCAACCGGG CGCCCGGATCAACGGCGTGACGGTGCAGAAGATGGCGCGTGCCCGGCGCGGCCGTGAGATCTACATCGGCCTGGTGACCG ACGACCCGTTCGGTCCGGTCATCGTGTTCGGCGCCGGCGGCACGATGATCGAGCTGATCAACGACCGCGCGATGGAGCTG CCGCCGCTGAACCGTTTCCTGGCGCGCCGGCTGATCGAGCGCTCGCGCGTCGCCGAGACCCTGGGCGAATGGCGCGGCGC CAGCGCGGTGAACCTCGACGCGCTGGAGCAGGTGCTGCTGCGCGTGTCGGAGATGGTGTGCGAGCTGCCGCAGCTGCGCG AGATGGACATCAACCCCATCATCGTCGACGAATCCGGCGCGGTGGCGGTGGATGCGCGCATCGTCATCGACAGCGCGCCG CAGGCGGCGGGTGGCCGCACCAACCCGTACTCGCACCTCTCCATCCTGCCTTATCCGACACGCTACGAGCAGGTCTGGCC GCTGCGCGGCGGCGGCGAGTACACGGTGCGCCCGATCCGGCCGAACGACGCGCGGATGCTGCAGGACCTGGTGCTGCACC TGTCGCCCGAGAGCCGCTACTTCCGCTTCGTGTCCTCGCTGACCGAGCTGTCGCCTTCGATGCTGGCGCGCTTCACGCTG ATCGACTACGACCGCGAGATGGCGCTGGTGGCGGTGGTCAAGGAGCGCAACGCGGGGGCGGACGGCGAGATGGCCGAGAC CGAGCGCATCGTCGGCGTGTCGCGCTACATCACCAACCCCGATCACTCGACCTGCGAGTTCTCGCTGGTGGTGGCCGACG ACTTCAACGGCCGCGGCATCGGCTCGCGCCTGATGGAAAGCATCATGGACGTGGCGCGCGAGAAGGGCCTGAGCGAGATC GACGGGCTGGTGCTCGCCAACAACGCCGACATGCTCAAGCTCATGCGCTCGCTGGGCTTCGCGGTCAAGCGCTTCGCCGA CGACCCGGACTTCATGCTGGTGACCCACACGCTGTAG
Upstream 100 bases:
>100_bases GCATCTTCGTGGTGGCCTTGCTGGTCTGACGTCCGTCTGCGGCACCCTTTGGCGCAGAGCACTGCGCCTGGGGAGGGCGT TGTCAGGACCGTGTCATCCG
Downstream 100 bases:
>100_bases ATCGGCCCGGCTCCGCTACATCAGGCGGTGCGGCGCCGGAACTTCCGGTGACGCACCTGCGTCCACCTCACAATGGTGTG GCGCGTGCCGCACGGATCGC
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 918; Mature: 917
Protein sequence:
>918_residues MPRRSLHAAVHARRSDRRRLDLMDKHFLTPLFSPESIIVLAGAPDDPTGQTPQARVLHQALRAQPYAGALQFLDIHATGT LAELAQTRADLAVIALPPQQVASALEVAGRLACRSALVVSSGIGAEAAATLKKIAQREGIHLLGPNGLGFQRPALQLNAS AAGPLAKPGSLALVSQSGALTTSVLDWASTNAVGFSSVVSLGPNTSVDIAQVLDYLANDAQTHSIVVYVEGISSARHFMS ALRSAAKAKPVVVLKAGRKPAGNEAAQTHSGAIVGSDDVFDAALRRAGAVRVRSFVELFSAAKCLASRYRPVGRRLAIVT NGGGPGVLAADWVNELYLHLGRLSAESAAALAPQLPPLASLSDLIDLSEDAGPEHYRAAIDAAGNDTQIDGVLTVYSPKV GVDAADIAGALVEVKHTMGKPLLSCWMGDASVGAARELLNEAGIPGFRTPEAAVGAFGNIASFYQNQLLLQQTPSPLSTL AKPDIEAARLVIESVLAERRKVLTEMESKTLLSSFHIPVTNTILARSANEAMMIATQLGFPVALKIDSSDISHKSDVEGV ALNIMNGASARDTYTDMVERVARLQPGARINGVTVQKMARARRGREIYIGLVTDDPFGPVIVFGAGGTMIELINDRAMEL PPLNRFLARRLIERSRVAETLGEWRGASAVNLDALEQVLLRVSEMVCELPQLREMDINPIIVDESGAVAVDARIVIDSAP QAAGGRTNPYSHLSILPYPTRYEQVWPLRGGGEYTVRPIRPNDARMLQDLVLHLSPESRYFRFVSSLTELSPSMLARFTL IDYDREMALVAVVKERNAGADGEMAETERIVGVSRYITNPDHSTCEFSLVVADDFNGRGIGSRLMESIMDVAREKGLSEI DGLVLANNADMLKLMRSLGFAVKRFADDPDFMLVTHTL
Sequences:
>Translated_918_residues MPRRSLHAAVHARRSDRRRLDLMDKHFLTPLFSPESIIVLAGAPDDPTGQTPQARVLHQALRAQPYAGALQFLDIHATGT LAELAQTRADLAVIALPPQQVASALEVAGRLACRSALVVSSGIGAEAAATLKKIAQREGIHLLGPNGLGFQRPALQLNAS AAGPLAKPGSLALVSQSGALTTSVLDWASTNAVGFSSVVSLGPNTSVDIAQVLDYLANDAQTHSIVVYVEGISSARHFMS ALRSAAKAKPVVVLKAGRKPAGNEAAQTHSGAIVGSDDVFDAALRRAGAVRVRSFVELFSAAKCLASRYRPVGRRLAIVT NGGGPGVLAADWVNELYLHLGRLSAESAAALAPQLPPLASLSDLIDLSEDAGPEHYRAAIDAAGNDTQIDGVLTVYSPKV GVDAADIAGALVEVKHTMGKPLLSCWMGDASVGAARELLNEAGIPGFRTPEAAVGAFGNIASFYQNQLLLQQTPSPLSTL AKPDIEAARLVIESVLAERRKVLTEMESKTLLSSFHIPVTNTILARSANEAMMIATQLGFPVALKIDSSDISHKSDVEGV ALNIMNGASARDTYTDMVERVARLQPGARINGVTVQKMARARRGREIYIGLVTDDPFGPVIVFGAGGTMIELINDRAMEL PPLNRFLARRLIERSRVAETLGEWRGASAVNLDALEQVLLRVSEMVCELPQLREMDINPIIVDESGAVAVDARIVIDSAP QAAGGRTNPYSHLSILPYPTRYEQVWPLRGGGEYTVRPIRPNDARMLQDLVLHLSPESRYFRFVSSLTELSPSMLARFTL IDYDREMALVAVVKERNAGADGEMAETERIVGVSRYITNPDHSTCEFSLVVADDFNGRGIGSRLMESIMDVAREKGLSEI DGLVLANNADMLKLMRSLGFAVKRFADDPDFMLVTHTL >Mature_917_residues PRRSLHAAVHARRSDRRRLDLMDKHFLTPLFSPESIIVLAGAPDDPTGQTPQARVLHQALRAQPYAGALQFLDIHATGTL AELAQTRADLAVIALPPQQVASALEVAGRLACRSALVVSSGIGAEAAATLKKIAQREGIHLLGPNGLGFQRPALQLNASA AGPLAKPGSLALVSQSGALTTSVLDWASTNAVGFSSVVSLGPNTSVDIAQVLDYLANDAQTHSIVVYVEGISSARHFMSA LRSAAKAKPVVVLKAGRKPAGNEAAQTHSGAIVGSDDVFDAALRRAGAVRVRSFVELFSAAKCLASRYRPVGRRLAIVTN GGGPGVLAADWVNELYLHLGRLSAESAAALAPQLPPLASLSDLIDLSEDAGPEHYRAAIDAAGNDTQIDGVLTVYSPKVG VDAADIAGALVEVKHTMGKPLLSCWMGDASVGAARELLNEAGIPGFRTPEAAVGAFGNIASFYQNQLLLQQTPSPLSTLA KPDIEAARLVIESVLAERRKVLTEMESKTLLSSFHIPVTNTILARSANEAMMIATQLGFPVALKIDSSDISHKSDVEGVA LNIMNGASARDTYTDMVERVARLQPGARINGVTVQKMARARRGREIYIGLVTDDPFGPVIVFGAGGTMIELINDRAMELP PLNRFLARRLIERSRVAETLGEWRGASAVNLDALEQVLLRVSEMVCELPQLREMDINPIIVDESGAVAVDARIVIDSAPQ AAGGRTNPYSHLSILPYPTRYEQVWPLRGGGEYTVRPIRPNDARMLQDLVLHLSPESRYFRFVSSLTELSPSMLARFTLI DYDREMALVAVVKERNAGADGEMAETERIVGVSRYITNPDHSTCEFSLVVADDFNGRGIGSRLMESIMDVAREKGLSEID GLVLANNADMLKLMRSLGFAVKRFADDPDFMLVTHTL
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=818, Percent_Identity=35.6968215158924, Blast_Score=480, Evalue=1e-136, Organism=Escherichia coli, GI1786949, Length=247, Percent_Identity=28.7449392712551, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 98269; Mature: 98138
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRSLHAAVHARRSDRRRLDLMDKHFLTPLFSPESIIVLAGAPDDPTGQTPQARVLHQA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH LRAQPYAGALQFLDIHATGTLAELAQTRADLAVIALPPQQVASALEVAGRLACRSALVVS HHCCCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHC SGIGAEAAATLKKIAQREGIHLLGPNGLGFQRPALQLNASAAGPLAKPGSLALVSQSGAL CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCC TTSVLDWASTNAVGFSSVVSLGPNTSVDIAQVLDYLANDAQTHSIVVYVEGISSARHFMS HHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHH ALRSAAKAKPVVVLKAGRKPAGNEAAQTHSGAIVGSDDVFDAALRRAGAVRVRSFVELFS HHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH AAKCLASRYRPVGRRLAIVTNGGGPGVLAADWVNELYLHLGRLSAESAAALAPQLPPLAS HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHH LSDLIDLSEDAGPEHYRAAIDAAGNDTQIDGVLTVYSPKVGVDAADIAGALVEVKHTMGK HHHHHHCCCCCCCHHHHHHHCCCCCCCEECEEEEEECCCCCCCHHHHHHHHHHHHHHHCC PLLSCWMGDASVGAARELLNEAGIPGFRTPEAAVGAFGNIASFYQNQLLLQQTPSPLSTL HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH AKPDIEAARLVIESVLAERRKVLTEMESKTLLSSFHIPVTNTILARSANEAMMIATQLGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCC PVALKIDSSDISHKSDVEGVALNIMNGASARDTYTDMVERVARLQPGARINGVTVQKMAR EEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ARRGREIYIGLVTDDPFGPVIVFGAGGTMIELINDRAMELPPLNRFLARRLIERSRVAET HHCCCEEEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH LGEWRGASAVNLDALEQVLLRVSEMVCELPQLREMDINPIIVDESGAVAVDARIVIDSAP HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCEEEEEEEEEECCC QAAGGRTNPYSHLSILPYPTRYEQVWPLRGGGEYTVRPIRPNDARMLQDLVLHLSPESRY CCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH FRFVSSLTELSPSMLARFTLIDYDREMALVAVVKERNAGADGEMAETERIVGVSRYITNP HHHHHHHHHCCHHHHHHHHEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC DHSTCEFSLVVADDFNGRGIGSRLMESIMDVAREKGLSEIDGLVLANNADMLKLMRSLGF CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHH AVKRFADDPDFMLVTHTL HHHHHCCCCCEEEEEECC >Mature Secondary Structure PRRSLHAAVHARRSDRRRLDLMDKHFLTPLFSPESIIVLAGAPDDPTGQTPQARVLHQA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH LRAQPYAGALQFLDIHATGTLAELAQTRADLAVIALPPQQVASALEVAGRLACRSALVVS HHCCCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHC SGIGAEAAATLKKIAQREGIHLLGPNGLGFQRPALQLNASAAGPLAKPGSLALVSQSGAL CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCC TTSVLDWASTNAVGFSSVVSLGPNTSVDIAQVLDYLANDAQTHSIVVYVEGISSARHFMS HHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHH ALRSAAKAKPVVVLKAGRKPAGNEAAQTHSGAIVGSDDVFDAALRRAGAVRVRSFVELFS HHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHH AAKCLASRYRPVGRRLAIVTNGGGPGVLAADWVNELYLHLGRLSAESAAALAPQLPPLAS HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHH LSDLIDLSEDAGPEHYRAAIDAAGNDTQIDGVLTVYSPKVGVDAADIAGALVEVKHTMGK HHHHHHCCCCCCCHHHHHHHCCCCCCCEECEEEEEECCCCCCCHHHHHHHHHHHHHHHCC PLLSCWMGDASVGAARELLNEAGIPGFRTPEAAVGAFGNIASFYQNQLLLQQTPSPLSTL HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH AKPDIEAARLVIESVLAERRKVLTEMESKTLLSSFHIPVTNTILARSANEAMMIATQLGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCC PVALKIDSSDISHKSDVEGVALNIMNGASARDTYTDMVERVARLQPGARINGVTVQKMAR EEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ARRGREIYIGLVTDDPFGPVIVFGAGGTMIELINDRAMELPPLNRFLARRLIERSRVAET HHCCCEEEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH LGEWRGASAVNLDALEQVLLRVSEMVCELPQLREMDINPIIVDESGAVAVDARIVIDSAP HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCEEEEEEEEEECCC QAAGGRTNPYSHLSILPYPTRYEQVWPLRGGGEYTVRPIRPNDARMLQDLVLHLSPESRY CCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH FRFVSSLTELSPSMLARFTLIDYDREMALVAVVKERNAGADGEMAETERIVGVSRYITNP HHHHHHHHHCCHHHHHHHHEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC DHSTCEFSLVVADDFNGRGIGSRLMESIMDVAREKGLSEIDGLVLANNADMLKLMRSLGF CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHCCEEEECCHHHHHHHHHHHH AVKRFADDPDFMLVTHTL HHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]