| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yqgC [H]
Identifier: 124266203
GI number: 124266203
Start: 1072244
End: 1072726
Strand: Direct
Name: yqgC [H]
Synonym: Mpe_A1010
Alternate gene names: 124266203
Gene position: 1072244-1072726 (Clockwise)
Preceding gene: 124266200
Following gene: 124266204
Centisome position: 26.51
GC content: 73.08
Gene sequence:
>483_bases ATGGGCGACAGCTGGCTGTGGATCCTGAGCGTCGCGCTCATCGTGGCGGGGCTGGCGGGGACGGTGCTGCCGGCGCTGCC CGGCACGTTGCTGGTGCTGGCCGGCATCCTGCTCGGCGCCTGGATCGACGACTTCGCGCGTGTCGGCTGGGGCAGCCTCG CCGCCGTCGGCGTGCTGGCGGTGGTGGCCTGGGCGGCGGACTTCGTGGCCGGGCTGCTGGGCGCGCGCCGCGCTGGCGCC AGCCGGGAAGCGATCCTCGGTGCGGCGCTCGGCACCGTGGCCGGCATCTTCATGGGCCTGGTCGGCGTGCTCTTCATGCC GCTGGTCGGCGCGGCCGTCGGCGAGTACGTGGCGCGTCGCGACGAGCAGCGCGCGGTGCGGGTGGGCTTCGCCACCTGGC TGGGCGTCATGGCGGGGCTGGTCGCCAAGATCGCGATCTCGTTCATGATGATCGGCATCTTCGTGGTGGCCTTGCTGGTC TGA
Upstream 100 bases:
>100_bases GCGATCACGGCCCGGCATCGGCTCACCGACGCTCCCGTCGATTGAACTCCGGCGCGCGAACGCCATCTGTCCGTGAACAA CTCGTGCGGAAGGGCTCGAC
Downstream 100 bases:
>100_bases CGTCCGTCTGCGGCACCCTTTGGCGCAGAGCACTGCGCCTGGGGAGGGCGTTGTCAGGACCGTGTCATCCGATGCCCCGA AGGTCGCTGCATGCCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGDSWLWILSVALIVAGLAGTVLPALPGTLLVLAGILLGAWIDDFARVGWGSLAAVGVLAVVAWAADFVAGLLGARRAGA SREAILGAALGTVAGIFMGLVGVLFMPLVGAAVGEYVARRDEQRAVRVGFATWLGVMAGLVAKIAISFMMIGIFVVALLV
Sequences:
>Translated_160_residues MGDSWLWILSVALIVAGLAGTVLPALPGTLLVLAGILLGAWIDDFARVGWGSLAAVGVLAVVAWAADFVAGLLGARRAGA SREAILGAALGTVAGIFMGLVGVLFMPLVGAAVGEYVARRDEQRAVRVGFATWLGVMAGLVAKIAISFMMIGIFVVALLV >Mature_159_residues GDSWLWILSVALIVAGLAGTVLPALPGTLLVLAGILLGAWIDDFARVGWGSLAAVGVLAVVAWAADFVAGLLGARRAGAS REAILGAALGTVAGIFMGLVGVLFMPLVGAAVGEYVARRDEQRAVRVGFATWLGVMAGLVAKIAISFMMIGIFVVALLV
Specific function: Unknown
COG id: COG2839
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007403 [H]
Pfam domain/function: PF04306 DUF456 [H]
EC number: NA
Molecular weight: Translated: 16288; Mature: 16157
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSWLWILSVALIVAGLAGTVLPALPGTLLVLAGILLGAWIDDFARVGWGSLAAVGVLA CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VVAWAADFVAGLLGARRAGASREAILGAALGTVAGIFMGLVGVLFMPLVGAAVGEYVARR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEQRAVRVGFATWLGVMAGLVAKIAISFMMIGIFVVALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GDSWLWILSVALIVAGLAGTVLPALPGTLLVLAGILLGAWIDDFARVGWGSLAAVGVLA CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VVAWAADFVAGLLGARRAGASREAILGAALGTVAGIFMGLVGVLFMPLVGAAVGEYVARR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEQRAVRVGFATWLGVMAGLVAKIAISFMMIGIFVVALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]