| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is feaR [C]
Identifier: 124266187
GI number: 124266187
Start: 1055244
End: 1056200
Strand: Direct
Name: feaR [C]
Synonym: Mpe_A0994
Alternate gene names: 124266187
Gene position: 1055244-1056200 (Clockwise)
Preceding gene: 124266185
Following gene: 124266188
Centisome position: 26.09
GC content: 72.31
Gene sequence:
>957_bases ATGCCCACCCTGTTCACCACTGTCGGTGTCGAGCCCGCCCAGCGCCTGGCGTACTGGACCGATGGCGTCTGCGACACCTA TGTGCAGCTGGACTGCGACGCGATCGGCGACGCCTCGCGGTTCGAAGGCGAGATCGCCGCCGATGCGCTGTCCACGCTGA CGCTGTCGCGCGTGACGGCCAGCGCGCAGCGCGTGCGCCGCACGCCGGCCAAGATCGCGCGGGCGAGCGAGGACTACTTC CTCGTCAGCATCCAGACGCAGGGCTGCGGCGCGGTCGTGCAGGACGGACGCGTGGCCCATCTGTCGCCCGGCGACTTCGC CCTCTACGACAGCACGCGGCCCTACGAGCTGCGTTTCGACGCGGCATTCCAGCAGTACGTGCTGATGCTGCCCGGCCCCA CGCTGCGCACCGCCCTGACCGACACGCCGTCGCTCACCGCCTGCGCGGTCAGCGGCCGGCGCGGGGCCGGTCACCTGATG ATCGGCATGATCGAGACGCTGTCGGCCGAGATCGCCACGCTGGCGCCCGAGTCGGCTGCGGCCGTGGCGGACAGCGTGAC GCAGATCCTGATCGCCGGCTTGTCGACGTTGCCGGGCGCCCGGCCGCCGCCGGTGTCGCGGCTCGTCGCGCTGCACCGGC AGCAGGTGAAGGCGCTGGTGCGCGAGCGGCTGCGCGATCCGGATCTCACGGTGGTCCGCATCGCCGAGCGCCTCGGCGTG TCACCGAGCACCTTGCACCGGGCCTGGGCCGGCGAGGCCTGCTCGCTGGCCGACTGGATCCAGACCGAGCGCCTGGAAGC CGCGCGGCGCGACCTGTGCGCCGCGCAGCAGCGTCTGCGCCGCGTGAGCGAACTGGCGTACTCGTGGGGCTTCAAGGATG CCGCCCACTTCAGCCGCGCCTTCCGCCGGCGCTTCGGCTGTTCACCGCGCGAGCTGCGGGCCCGGATCGAAACCTGA
Upstream 100 bases:
>100_bases CGGCGTCTTGCCTGGACGAGGCGCGGTACTTGACCGCAGCACGCAGCGCGCGGCCTGGCCGCGTTGCGAATGGCGTTCTC AGGCCCTGAGCTGCAGCCCC
Downstream 100 bases:
>100_bases CATGCCGGACGTCGTGTGGCTAGCACGGCTGCGAGAGACCTTGCCGGCACACGCACCACGGTGCTCTCCTAGAGTCGCCG CTGGTTTTCTCCGGCCCGCC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: orf2 [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYF LVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLM IGMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARIET
Sequences:
>Translated_318_residues MPTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYF LVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLM IGMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARIET >Mature_317_residues PTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYFL VSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLMI GMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGVS PSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARIET
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787649, Length=281, Percent_Identity=26.3345195729537, Blast_Score=89, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003313 [H]
Pfam domain/function: PF02311 AraC_binding [H]
EC number: NA
Molecular weight: Translated: 34728; Mature: 34597
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTA CCCEEEECCCCHHHHHHHHCCCHHHHHEEEECHHCCCHHHHCCHHHHHHHHHHHHHHHHH SAQRVRRTPAKIARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFD HHHHHHHCHHHHHHCCCCEEEEEEECCCCCHHHCCCEEEEECCCCEEEECCCCCEEEEEH AAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLMIGMIETLSAEIATLAPESAA HHHHHHEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHH AVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRA CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FRRRFGCSPRELRARIET HHHHHCCCHHHHHHHCCC >Mature Secondary Structure PTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTA CCEEEECCCCHHHHHHHHCCCHHHHHEEEECHHCCCHHHHCCHHHHHHHHHHHHHHHHH SAQRVRRTPAKIARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFD HHHHHHHCHHHHHHCCCCEEEEEEECCCCCHHHCCCEEEEECCCCEEEECCCCCEEEEEH AAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLMIGMIETLSAEIATLAPESAA HHHHHHEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHH AVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRA CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FRRRFGCSPRELRARIET HHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10651646 [H]