Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is feaR [C]

Identifier: 124266187

GI number: 124266187

Start: 1055244

End: 1056200

Strand: Direct

Name: feaR [C]

Synonym: Mpe_A0994

Alternate gene names: 124266187

Gene position: 1055244-1056200 (Clockwise)

Preceding gene: 124266185

Following gene: 124266188

Centisome position: 26.09

GC content: 72.31

Gene sequence:

>957_bases
ATGCCCACCCTGTTCACCACTGTCGGTGTCGAGCCCGCCCAGCGCCTGGCGTACTGGACCGATGGCGTCTGCGACACCTA
TGTGCAGCTGGACTGCGACGCGATCGGCGACGCCTCGCGGTTCGAAGGCGAGATCGCCGCCGATGCGCTGTCCACGCTGA
CGCTGTCGCGCGTGACGGCCAGCGCGCAGCGCGTGCGCCGCACGCCGGCCAAGATCGCGCGGGCGAGCGAGGACTACTTC
CTCGTCAGCATCCAGACGCAGGGCTGCGGCGCGGTCGTGCAGGACGGACGCGTGGCCCATCTGTCGCCCGGCGACTTCGC
CCTCTACGACAGCACGCGGCCCTACGAGCTGCGTTTCGACGCGGCATTCCAGCAGTACGTGCTGATGCTGCCCGGCCCCA
CGCTGCGCACCGCCCTGACCGACACGCCGTCGCTCACCGCCTGCGCGGTCAGCGGCCGGCGCGGGGCCGGTCACCTGATG
ATCGGCATGATCGAGACGCTGTCGGCCGAGATCGCCACGCTGGCGCCCGAGTCGGCTGCGGCCGTGGCGGACAGCGTGAC
GCAGATCCTGATCGCCGGCTTGTCGACGTTGCCGGGCGCCCGGCCGCCGCCGGTGTCGCGGCTCGTCGCGCTGCACCGGC
AGCAGGTGAAGGCGCTGGTGCGCGAGCGGCTGCGCGATCCGGATCTCACGGTGGTCCGCATCGCCGAGCGCCTCGGCGTG
TCACCGAGCACCTTGCACCGGGCCTGGGCCGGCGAGGCCTGCTCGCTGGCCGACTGGATCCAGACCGAGCGCCTGGAAGC
CGCGCGGCGCGACCTGTGCGCCGCGCAGCAGCGTCTGCGCCGCGTGAGCGAACTGGCGTACTCGTGGGGCTTCAAGGATG
CCGCCCACTTCAGCCGCGCCTTCCGCCGGCGCTTCGGCTGTTCACCGCGCGAGCTGCGGGCCCGGATCGAAACCTGA

Upstream 100 bases:

>100_bases
CGGCGTCTTGCCTGGACGAGGCGCGGTACTTGACCGCAGCACGCAGCGCGCGGCCTGGCCGCGTTGCGAATGGCGTTCTC
AGGCCCTGAGCTGCAGCCCC

Downstream 100 bases:

>100_bases
CATGCCGGACGTCGTGTGGCTAGCACGGCTGCGAGAGACCTTGCCGGCACACGCACCACGGTGCTCTCCTAGAGTCGCCG
CTGGTTTTCTCCGGCCCGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: orf2 [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYF
LVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLM
IGMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV
SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARIET

Sequences:

>Translated_318_residues
MPTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYF
LVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLM
IGMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV
SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARIET
>Mature_317_residues
PTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTASAQRVRRTPAKIARASEDYFL
VSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFDAAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLMI
GMIETLSAEIATLAPESAAAVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGVS
PSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRAFRRRFGCSPRELRARIET

Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787649, Length=281, Percent_Identity=26.3345195729537, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003313 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 34728; Mature: 34597

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTA
CCCEEEECCCCHHHHHHHHCCCHHHHHEEEECHHCCCHHHHCCHHHHHHHHHHHHHHHHH
SAQRVRRTPAKIARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFD
HHHHHHHCHHHHHHCCCCEEEEEEECCCCCHHHCCCEEEEECCCCEEEECCCCCEEEEEH
AAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLMIGMIETLSAEIATLAPESAA
HHHHHHEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
AVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FRRRFGCSPRELRARIET
HHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
PTLFTTVGVEPAQRLAYWTDGVCDTYVQLDCDAIGDASRFEGEIAADALSTLTLSRVTA
CCEEEECCCCHHHHHHHHCCCHHHHHEEEECHHCCCHHHHCCHHHHHHHHHHHHHHHHH
SAQRVRRTPAKIARASEDYFLVSIQTQGCGAVVQDGRVAHLSPGDFALYDSTRPYELRFD
HHHHHHHCHHHHHHCCCCEEEEEEECCCCCHHHCCCEEEEECCCCEEEECCCCCEEEEEH
AAFQQYVLMLPGPTLRTALTDTPSLTACAVSGRRGAGHLMIGMIETLSAEIATLAPESAA
HHHHHHEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
AVADSVTQILIAGLSTLPGARPPPVSRLVALHRQQVKALVRERLRDPDLTVVRIAERLGV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
SPSTLHRAWAGEACSLADWIQTERLEAARRDLCAAQQRLRRVSELAYSWGFKDAAHFSRA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FRRRFGCSPRELRARIET
HHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10651646 [H]