| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266186
Identifier: 124266186
GI number: 124266186
Start: 1054021
End: 1055094
Strand: Reverse
Name: 124266186
Synonym: Mpe_A0993
Alternate gene names: NA
Gene position: 1055094-1054021 (Counterclockwise)
Preceding gene: 124266190
Following gene: 124266176
Centisome position: 26.09
GC content: 72.16
Gene sequence:
>1074_bases ATGCCGGTTTCGCACCCCAAGTTCCGCGCTGCCGCCGTCCAGGCTGCGCCGGTGTTCCTGGATCTCGACGCGTCGATCGA CAAGGCCGTGGGCCTGATCGCCGAGGCCGCCACGCAGGGCGCGCAGCTCGTGGCCTTTCCGGAAACCTGGCTGCCCGGCT ACCCGTGGTTCATCTGGCTCGATTCGCCGGCCTGGGCGCTGCAGTTCATCCAGCGCTACCACGATCACTCGCTGGTCGAC GGCTCGCCGCAGGCCGATCGCATCGCCCAGGCGGCCCGCGACCACGCCATCATGGTCGTGATGGGCCACAGCGAGAAGGC CGGCGGCAGCCTCTACATGGGCCAGTGGATCATCGACGCCGAGGGCCGCACGGTGGCGCGGCGCCGCAAGCTCAAGCCCA CGCACGTGGAGCGCACCGTGTTCGGCGAGGGCGACGGCAGCGACCTCGGCGTGCACGACACCGCGCTCGGACGCATCGGC GCGCTGTGCTGCTGGGAGCATCTGCAACCGCTGTCGAAGTACGCGATGTACGCGCAGGACGAGCAGGTGCACATCGCCGC CTGGCCCAGCTTCTCGCTCTACCGTGGCGGCGCCCATGCGCTGGGCGCGGAGGTGAACACCGCCGCCAGCCGCATCTACG CGGTGGAAGGCCAGTGCTTCGTGGTCGCCCCCTGCGCCACGGTCTCGAAGGAAATGGTGGCGATGCTGTGCGGCGACGAC CCGACGAAGCGACAGCTGCTGCTCGAAGGCGGTGGCTATGCGGGCATCTACGCGCCCGACGGCCGCCTGCTGACCGAGCC GCTGCCGGAGCACACCGAGGGGCTCGTCCACGCCGAGCTCGACCTGGGCCTGATCACGCTGGCCAAGGCGGCGGCCGATC CGGCCGGCCACTACTCGCGGCCCGACGTGACGCGCCTGCTGCTCGACAAGACACCGCGCGACCGCGTGGTGCTGGCGCCG CAGCGCCCTCCCGGCGCGTCGGCAGGCGCCGCCGAGGCCGCACCACCGCCGTCCGGCACATCGCCCGGTGACCCGGCCGC TGCCGGCCCGTCGACCGCGCGCCGCACGGCTTGA
Upstream 100 bases:
>100_bases GCGCGCTGCGTGCTGCGGTCAAGTACCGCGCCTCGTCCAGGCAAGACGCCGGGACCGATCCGTCGCATGCTCCGCTCCAT TGCACGACAGGAGCCTCGCC
Downstream 100 bases:
>100_bases GCGTCGGGCGATCGCCGCGTTCACCACGCGCGCTCCTCGCGGCTCAGCCGCCGGGGGCCGCCGGCGGGGCTGCCGCCTGC ACGGCCGGCAGCCCGCCGAG
Product: aliphatic nitrilase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPVSHPKFRAAAVQAAPVFLDLDASIDKAVGLIAEAATQGAQLVAFPETWLPGYPWFIWLDSPAWALQFIQRYHDHSLVD GSPQADRIAQAARDHAIMVVMGHSEKAGGSLYMGQWIIDAEGRTVARRRKLKPTHVERTVFGEGDGSDLGVHDTALGRIG ALCCWEHLQPLSKYAMYAQDEQVHIAAWPSFSLYRGGAHALGAEVNTAASRIYAVEGQCFVVAPCATVSKEMVAMLCGDD PTKRQLLLEGGGYAGIYAPDGRLLTEPLPEHTEGLVHAELDLGLITLAKAAADPAGHYSRPDVTRLLLDKTPRDRVVLAP QRPPGASAGAAEAAPPPSGTSPGDPAAAGPSTARRTA
Sequences:
>Translated_357_residues MPVSHPKFRAAAVQAAPVFLDLDASIDKAVGLIAEAATQGAQLVAFPETWLPGYPWFIWLDSPAWALQFIQRYHDHSLVD GSPQADRIAQAARDHAIMVVMGHSEKAGGSLYMGQWIIDAEGRTVARRRKLKPTHVERTVFGEGDGSDLGVHDTALGRIG ALCCWEHLQPLSKYAMYAQDEQVHIAAWPSFSLYRGGAHALGAEVNTAASRIYAVEGQCFVVAPCATVSKEMVAMLCGDD PTKRQLLLEGGGYAGIYAPDGRLLTEPLPEHTEGLVHAELDLGLITLAKAAADPAGHYSRPDVTRLLLDKTPRDRVVLAP QRPPGASAGAAEAAPPPSGTSPGDPAAAGPSTARRTA >Mature_356_residues PVSHPKFRAAAVQAAPVFLDLDASIDKAVGLIAEAATQGAQLVAFPETWLPGYPWFIWLDSPAWALQFIQRYHDHSLVDG SPQADRIAQAARDHAIMVVMGHSEKAGGSLYMGQWIIDAEGRTVARRRKLKPTHVERTVFGEGDGSDLGVHDTALGRIGA LCCWEHLQPLSKYAMYAQDEQVHIAAWPSFSLYRGGAHALGAEVNTAASRIYAVEGQCFVVAPCATVSKEMVAMLCGDDP TKRQLLLEGGGYAGIYAPDGRLLTEPLPEHTEGLVHAELDLGLITLAKAAADPAGHYSRPDVTRLLLDKTPRDRVVLAPQ RPPGASAGAAEAAPPPSGTSPGDPAAAGPSTARRTA
Specific function: Acts on aliphatic nitriles such as acrylonitrile, crotononitrile and glutaronitrile [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=320, Percent_Identity=31.25, Blast_Score=150, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6322027, Length=192, Percent_Identity=30.7291666666667, Blast_Score=86, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 37969; Mature: 37838
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00920 NITRIL_CHT_1 ; PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSHPKFRAAAVQAAPVFLDLDASIDKAVGLIAEAATQGAQLVAFPETWLPGYPWFIWL CCCCCCCHHHHHEEECEEEEECCCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCCEEEEE DSPAWALQFIQRYHDHSLVDGSPQADRIAQAARDHAIMVVMGHSEKAGGSLYMGQWIIDA CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEC EGRTVARRRKLKPTHVERTVFGEGDGSDLGVHDTALGRIGALCCWEHLQPLSKYAMYAQD CCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC EQVHIAAWPSFSLYRGGAHALGAEVNTAASRIYAVEGQCFVVAPCATVSKEMVAMLCGDD CEEEEEECCCCCEECCCCHHCCCCHHHHHHEEEEECCCEEEEECHHHHHHHHHHHHCCCC PTKRQLLLEGGGYAGIYAPDGRLLTEPLPEHTEGLVHAELDLGLITLAKAAADPAGHYSR CCCEEEEEECCCEEEEECCCCCEECCCCCCHHCCEEEEEECCCHHHHHHHHCCCCCCCCC PDVTRLLLDKTPRDRVVLAPQRPPGASAGAAEAAPPPSGTSPGDPAAAGPSTARRTA CHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVSHPKFRAAAVQAAPVFLDLDASIDKAVGLIAEAATQGAQLVAFPETWLPGYPWFIWL CCCCCCHHHHHEEECEEEEECCCCHHHHHHHHHHHHCCCCEEEEECHHHCCCCCEEEEE DSPAWALQFIQRYHDHSLVDGSPQADRIAQAARDHAIMVVMGHSEKAGGSLYMGQWIIDA CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEEC EGRTVARRRKLKPTHVERTVFGEGDGSDLGVHDTALGRIGALCCWEHLQPLSKYAMYAQD CCCCHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC EQVHIAAWPSFSLYRGGAHALGAEVNTAASRIYAVEGQCFVVAPCATVSKEMVAMLCGDD CEEEEEECCCCCEECCCCHHCCCCHHHHHHEEEEECCCEEEEECHHHHHHHHHHHHCCCC PTKRQLLLEGGGYAGIYAPDGRLLTEPLPEHTEGLVHAELDLGLITLAKAAADPAGHYSR CCCEEEEEECCCEEEEECCCCCEECCCCCCHHCCEEEEEECCCHHHHHHHHCCCCCCCCC PDVTRLLLDKTPRDRVVLAPQRPPGASAGAAEAAPPPSGTSPGDPAAAGPSTARRTA CHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1390687 [H]