Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is bam [H]

Identifier: 124266175

GI number: 124266175

Start: 1044746

End: 1046158

Strand: Reverse

Name: bam [H]

Synonym: Mpe_A0982

Alternate gene names: 124266175

Gene position: 1046158-1044746 (Counterclockwise)

Preceding gene: 124266176

Following gene: 124266171

Centisome position: 25.87

GC content: 74.38

Gene sequence:

>1413_bases
ATGCAAGCACTCTGGCAACACAGCGCCCTCGAACTGGCCACGCTGATCGCACGGCGCGACGTGTCCTGCGTCGAGGTGAT
CGAGGCCCATCTGGCGCGCATCGAGGCCGTCAACCCGCGCGTCAACGCCGTGGTCCGTCTGCTGGCCGACGAGGCCCGCG
CCGCCGCCGTGGCGGCCGATCGCCAGGTGGCGGCAGGCGCCGCGCTCGGCCCGCTGCACGGCGTGCCGATCACGGTGAAG
GAAAACATCGACATGGCCGGCCTGCCCACTCCCTGGGGCGTGCCGGCGCTGGCTGGCGCGGTGGTGCCGGAGGATGCGCC
GACGGTGCAACGCATGCGCGCGGCCGGCGCGATCCCGATCGCCCGCACCAACCTCCCCGACCTGGCGCTGCGGGTGCACA
CCGACAGCAGCCTGCACGGCGCCACGCTCAACCCCTGGAATCCGGGGCGCACCGCCGGCGGCTCGAGCGGCGGCGACGCG
GTGGCGCTGGCCACCGGCATGGCCGCGATCGGCCTGGGCAACGACATCGGCGGCTCGCTGCGCAACCCGGCCAATGCCTG
CGGCATCGCGTCGATCCGGCCGTCGGCGGGCCGCGTGCCCGACGCCGGCTTCGTGCCGGCCGAAGACCGCCTGTTCGCGG
TGCAGCTGATGAACGTGCAGGGCCCGATGGCACGTCGCGTGGCCGACGTGCGTGCCGCGCTGCAGGCGCTGATGGGCGCG
CACCCGCGTGATCCCTGGTCGATCTCGGCGCCGCTGGTCGGCGCCGCCGAGCCCGGACCGCTGCGCGTCGCGGTGCTGCC
CGAGCCACCGGGTGGCCGCACCGATCCGCGCGTGGCCGCCGCGGTACGGCGGGCCGCCGCGGCGCTGGCCGATGCCGGCT
ACGAGGTGACCGAGATCTGCCCGCCGCGCTACGAGGACGCGATCACCGCCTGGGCGCAACTGCTGTTCGGCGACTTCGAG
GCGATGACGCCGCAGCTGCTGCCGATGATGGGGCGCGACGGCGCGGCCTTCTGGGAGATGCTGCGCGCCATCATGCCGCC
GTGGGCCGACACCGCGGCGGTGTCCGAGCTGTTCATGCGCCGCGATGGCATCGCGCGCGACTGGTCGCGCTTCATGGCGA
CGTATCCGCTGCTGCTGTCGCCGACCTGGTCGCAACTGCCGTTCGAGCCCGGCTTCGACTGCGCCTCGCCCGCTGGCGCC
GCCGACACCGCGGAGATGATCCGTCCGGTGCTGCCGGCCAATCTGATGGGCCTGCCCTCGGCCTGCGTGCCGGCGGACCG
CGACGAGGCCACCGGCCTGCCGATCGGCGTGCTGCTGACCGGCCGGCGTTTCCGCGAGGACCAGTGCCTCGATGCCGCCG
AAGCGATCGAGCGGCGCTTCGCGCTCGCCACGCCCATCGACCCCGTCGGCTGA

Upstream 100 bases:

>100_bases
GAAGCGTGCCTGAGGCCGGCGTCGCGCGCGCGACTGTCCTCACCGTCCGGCAATCGCACACTCATCGCTCCTGCCCCTTC
ACCCCACCCAGGCGGACCCC

Downstream 100 bases:

>100_bases
GACTCAGAGGTCGACCGGCAGCTCCAGGTGCTGCCGGTAGATGAAGTCGCGGTGCTCGCCGAGGATGGGGACCGCGGCGG
CCCTCACCACCGGGTCGCCG

Product: indoleacetamide hydrolase

Products: NA

Alternate protein names: IAH; Indole-3-acetamide hydrolase [H]

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPITVK
ENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDA
VALATGMAAIGLGNDIGGSLRNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA
HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEICPPRYEDAITAWAQLLFGDFE
AMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMRRDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGA
ADTAEMIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG

Sequences:

>Translated_470_residues
MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPITVK
ENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDA
VALATGMAAIGLGNDIGGSLRNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA
HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEICPPRYEDAITAWAQLLFGDFE
AMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMRRDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGA
ADTAEMIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG
>Mature_470_residues
MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPITVK
ENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDA
VALATGMAAIGLGNDIGGSLRNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA
HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEICPPRYEDAITAWAQLLFGDFE
AMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMRRDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGA
ADTAEMIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG

Specific function: Hydrolyzes indole-3-acetamide (IAM) into indole-3-acetic acid (IAA) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI195972892, Length=239, Percent_Identity=36.8200836820084, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI222831590, Length=504, Percent_Identity=24.8015873015873, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI166795287, Length=212, Percent_Identity=31.1320754716981, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17537465, Length=498, Percent_Identity=25.7028112449799, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17538252, Length=312, Percent_Identity=29.8076923076923, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556264, Length=283, Percent_Identity=29.3286219081272, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71990152, Length=297, Percent_Identity=26.5993265993266, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17556276, Length=174, Percent_Identity=36.7816091954023, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17556278, Length=174, Percent_Identity=36.7816091954023, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17538254, Length=302, Percent_Identity=25.1655629139073, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17543272, Length=157, Percent_Identity=35.031847133758, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320448, Length=234, Percent_Identity=29.9145299145299, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6319685, Length=402, Percent_Identity=26.3681592039801, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323950, Length=205, Percent_Identity=27.8048780487805, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644968, Length=494, Percent_Identity=26.1133603238866, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24652985, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI19922090, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24652981, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24652983, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI161078093, Length=483, Percent_Identity=27.1221532091097, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI45550774, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24648435, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24648437, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI21356731, Length=497, Percent_Identity=26.7605633802817, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24648113, Length=463, Percent_Identity=27.4298056155508, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24648441, Length=180, Percent_Identity=35, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24648439, Length=180, Percent_Identity=35, Blast_Score=99, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: NA

Molecular weight: Translated: 49272; Mature: 49272

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00571 AMIDASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAAD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
RQVAAGAALGPLHGVPITVKENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPI
HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCE
ARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDAVALATGMAAIGLGNDIGGSL
EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCC
RNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEIC
CCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC
PPRYEDAITAWAQLLFGDFEAMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMR
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
RDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGAADTAEMIRPVLPANLMGLPS
HCCCHHHHHHHHHHCCHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCC
ACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAAD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
RQVAAGAALGPLHGVPITVKENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPI
HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCE
ARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDAVALATGMAAIGLGNDIGGSL
EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCC
RNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEIC
CCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC
PPRYEDAITAWAQLLFGDFEAMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMR
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
RDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGAADTAEMIRPVLPANLMGLPS
HCCCHHHHHHHHHHCCHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCC
ACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]