| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is bam [H]
Identifier: 124266175
GI number: 124266175
Start: 1044746
End: 1046158
Strand: Reverse
Name: bam [H]
Synonym: Mpe_A0982
Alternate gene names: 124266175
Gene position: 1046158-1044746 (Counterclockwise)
Preceding gene: 124266176
Following gene: 124266171
Centisome position: 25.87
GC content: 74.38
Gene sequence:
>1413_bases ATGCAAGCACTCTGGCAACACAGCGCCCTCGAACTGGCCACGCTGATCGCACGGCGCGACGTGTCCTGCGTCGAGGTGAT CGAGGCCCATCTGGCGCGCATCGAGGCCGTCAACCCGCGCGTCAACGCCGTGGTCCGTCTGCTGGCCGACGAGGCCCGCG CCGCCGCCGTGGCGGCCGATCGCCAGGTGGCGGCAGGCGCCGCGCTCGGCCCGCTGCACGGCGTGCCGATCACGGTGAAG GAAAACATCGACATGGCCGGCCTGCCCACTCCCTGGGGCGTGCCGGCGCTGGCTGGCGCGGTGGTGCCGGAGGATGCGCC GACGGTGCAACGCATGCGCGCGGCCGGCGCGATCCCGATCGCCCGCACCAACCTCCCCGACCTGGCGCTGCGGGTGCACA CCGACAGCAGCCTGCACGGCGCCACGCTCAACCCCTGGAATCCGGGGCGCACCGCCGGCGGCTCGAGCGGCGGCGACGCG GTGGCGCTGGCCACCGGCATGGCCGCGATCGGCCTGGGCAACGACATCGGCGGCTCGCTGCGCAACCCGGCCAATGCCTG CGGCATCGCGTCGATCCGGCCGTCGGCGGGCCGCGTGCCCGACGCCGGCTTCGTGCCGGCCGAAGACCGCCTGTTCGCGG TGCAGCTGATGAACGTGCAGGGCCCGATGGCACGTCGCGTGGCCGACGTGCGTGCCGCGCTGCAGGCGCTGATGGGCGCG CACCCGCGTGATCCCTGGTCGATCTCGGCGCCGCTGGTCGGCGCCGCCGAGCCCGGACCGCTGCGCGTCGCGGTGCTGCC CGAGCCACCGGGTGGCCGCACCGATCCGCGCGTGGCCGCCGCGGTACGGCGGGCCGCCGCGGCGCTGGCCGATGCCGGCT ACGAGGTGACCGAGATCTGCCCGCCGCGCTACGAGGACGCGATCACCGCCTGGGCGCAACTGCTGTTCGGCGACTTCGAG GCGATGACGCCGCAGCTGCTGCCGATGATGGGGCGCGACGGCGCGGCCTTCTGGGAGATGCTGCGCGCCATCATGCCGCC GTGGGCCGACACCGCGGCGGTGTCCGAGCTGTTCATGCGCCGCGATGGCATCGCGCGCGACTGGTCGCGCTTCATGGCGA CGTATCCGCTGCTGCTGTCGCCGACCTGGTCGCAACTGCCGTTCGAGCCCGGCTTCGACTGCGCCTCGCCCGCTGGCGCC GCCGACACCGCGGAGATGATCCGTCCGGTGCTGCCGGCCAATCTGATGGGCCTGCCCTCGGCCTGCGTGCCGGCGGACCG CGACGAGGCCACCGGCCTGCCGATCGGCGTGCTGCTGACCGGCCGGCGTTTCCGCGAGGACCAGTGCCTCGATGCCGCCG AAGCGATCGAGCGGCGCTTCGCGCTCGCCACGCCCATCGACCCCGTCGGCTGA
Upstream 100 bases:
>100_bases GAAGCGTGCCTGAGGCCGGCGTCGCGCGCGCGACTGTCCTCACCGTCCGGCAATCGCACACTCATCGCTCCTGCCCCTTC ACCCCACCCAGGCGGACCCC
Downstream 100 bases:
>100_bases GACTCAGAGGTCGACCGGCAGCTCCAGGTGCTGCCGGTAGATGAAGTCGCGGTGCTCGCCGAGGATGGGGACCGCGGCGG CCCTCACCACCGGGTCGCCG
Product: indoleacetamide hydrolase
Products: NA
Alternate protein names: IAH; Indole-3-acetamide hydrolase [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPITVK ENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDA VALATGMAAIGLGNDIGGSLRNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEICPPRYEDAITAWAQLLFGDFE AMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMRRDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGA ADTAEMIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG
Sequences:
>Translated_470_residues MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPITVK ENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDA VALATGMAAIGLGNDIGGSLRNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEICPPRYEDAITAWAQLLFGDFE AMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMRRDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGA ADTAEMIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG >Mature_470_residues MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAADRQVAAGAALGPLHGVPITVK ENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPIARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDA VALATGMAAIGLGNDIGGSLRNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEICPPRYEDAITAWAQLLFGDFE AMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMRRDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGA ADTAEMIRPVLPANLMGLPSACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG
Specific function: Hydrolyzes indole-3-acetamide (IAM) into indole-3-acetic acid (IAA) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=239, Percent_Identity=36.8200836820084, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI222831590, Length=504, Percent_Identity=24.8015873015873, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI166795287, Length=212, Percent_Identity=31.1320754716981, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17537465, Length=498, Percent_Identity=25.7028112449799, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17538252, Length=312, Percent_Identity=29.8076923076923, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17556264, Length=283, Percent_Identity=29.3286219081272, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71990152, Length=297, Percent_Identity=26.5993265993266, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17556276, Length=174, Percent_Identity=36.7816091954023, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17556278, Length=174, Percent_Identity=36.7816091954023, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17538254, Length=302, Percent_Identity=25.1655629139073, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17543272, Length=157, Percent_Identity=35.031847133758, Blast_Score=76, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6320448, Length=234, Percent_Identity=29.9145299145299, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319685, Length=402, Percent_Identity=26.3681592039801, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323950, Length=205, Percent_Identity=27.8048780487805, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24644968, Length=494, Percent_Identity=26.1133603238866, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24652985, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI19922090, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24652981, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24652983, Length=495, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI161078093, Length=483, Percent_Identity=27.1221532091097, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI45550774, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI24648435, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI24648437, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI21356731, Length=497, Percent_Identity=26.7605633802817, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI24648113, Length=463, Percent_Identity=27.4298056155508, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24648441, Length=180, Percent_Identity=35, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI24648439, Length=180, Percent_Identity=35, Blast_Score=99, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: NA
Molecular weight: Translated: 49272; Mature: 49272
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00571 AMIDASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAAD CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC RQVAAGAALGPLHGVPITVKENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPI HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCE ARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDAVALATGMAAIGLGNDIGGSL EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCC RNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEIC CCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC PPRYEDAITAWAQLLFGDFEAMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMR CCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH RDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGAADTAEMIRPVLPANLMGLPS HCCCHHHHHHHHHHCCHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCC ACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQALWQHSALELATLIARRDVSCVEVIEAHLARIEAVNPRVNAVVRLLADEARAAAVAAD CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC RQVAAGAALGPLHGVPITVKENIDMAGLPTPWGVPALAGAVVPEDAPTVQRMRAAGAIPI HHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCE ARTNLPDLALRVHTDSSLHGATLNPWNPGRTAGGSSGGDAVALATGMAAIGLGNDIGGSL EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCC RNPANACGIASIRPSAGRVPDAGFVPAEDRLFAVQLMNVQGPMARRVADVRAALQALMGA CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC HPRDPWSISAPLVGAAEPGPLRVAVLPEPPGGRTDPRVAAAVRRAAAALADAGYEVTEIC CCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC PPRYEDAITAWAQLLFGDFEAMTPQLLPMMGRDGAAFWEMLRAIMPPWADTAAVSELFMR CCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH RDGIARDWSRFMATYPLLLSPTWSQLPFEPGFDCASPAGAADTAEMIRPVLPANLMGLPS HCCCHHHHHHHHHHCCHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCC ACVPADRDEATGLPIGVLLTGRRFREDQCLDAAEAIERRFALATPIDPVG CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]