| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266173
Identifier: 124266173
GI number: 124266173
Start: 1043260
End: 1043946
Strand: Direct
Name: 124266173
Synonym: Mpe_A0980
Alternate gene names: NA
Gene position: 1043260-1043946 (Clockwise)
Preceding gene: 124266172
Following gene: 124266174
Centisome position: 25.8
GC content: 70.89
Gene sequence:
>687_bases ATGCGCCTGCTCAAGCCGCACCTGGACATCGGCCTGTTCACCAACCAGATCGCGCAGCAGCGCAGCTTCTGGTCGGACAC CGTGGGCCTGCGCCTCGACCATGAGCTCGACTTCGGCAACGGCACCGTCCAGCACCGCTACGACGCCCACGGTTCCGTCG TCAAGGTGAACCACTACCCGACGCCGCTGCCCGGGCAGCCGCCGACCGGCTACGTCGGCCTGACGATCGCGGGCCCCGAT GCCCGCCGCTACGAAGGCCGGCACCCGGACGGCGACGCGGTCCGCGTGGTGCCGAGCGGCACCGATGGCGTGGTGGGCAT CGGCATCACGGTGCGCACGCCGGACACCGCGCGGCTGATGCGCTTCTACACCGAGGCGATGGCGTTCGACCGCGTCGCCG AAGACGTGGCGCGCTGCGGCGACACGCTGCTGTTCGTCACGCCCGGCCCGGGCGGGCGACCCTGCAACGATTTCGTCGGC CTGGCGTTCCGCTACCTCACCGTCCAGATCGACGATGCCGACCTGGCGATGCAGGAGATCGTCGCGCGCGGTGGAAGCGT GGCGCGCGACCCCGTCACCTTCGGCACGGTCGCGCGCTACGGTTTCGTCGCGGACCCCGACGGGAACTGGATCGAGATCT CCGCGCGCGGATCACTCGGCGGTCACGTGCCGCCGGTCGATCGCTGA
Upstream 100 bases:
>100_bases GAACGGGGCGACCGCCTGTTCGCACACATGATCACCGGTGGCGCGCACCAGGCGATCGACAACCACGCGCTCGACACGCT GGGCGCCTGAGGGACCGGCC
Downstream 100 bases:
>100_bases GTCCACCGAGGCCCATCGCATGGCGCACTACGTCGACGTGGAGGACGCGGTCGGGATGCCCGGCCTGCGCGTGGTGCTCA CGCCGGGCGTGCCCGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRLLKPHLDIGLFTNQIAQQRSFWSDTVGLRLDHELDFGNGTVQHRYDAHGSVVKVNHYPTPLPGQPPTGYVGLTIAGPD ARRYEGRHPDGDAVRVVPSGTDGVVGIGITVRTPDTARLMRFYTEAMAFDRVAEDVARCGDTLLFVTPGPGGRPCNDFVG LAFRYLTVQIDDADLAMQEIVARGGSVARDPVTFGTVARYGFVADPDGNWIEISARGSLGGHVPPVDR
Sequences:
>Translated_228_residues MRLLKPHLDIGLFTNQIAQQRSFWSDTVGLRLDHELDFGNGTVQHRYDAHGSVVKVNHYPTPLPGQPPTGYVGLTIAGPD ARRYEGRHPDGDAVRVVPSGTDGVVGIGITVRTPDTARLMRFYTEAMAFDRVAEDVARCGDTLLFVTPGPGGRPCNDFVG LAFRYLTVQIDDADLAMQEIVARGGSVARDPVTFGTVARYGFVADPDGNWIEISARGSLGGHVPPVDR >Mature_228_residues MRLLKPHLDIGLFTNQIAQQRSFWSDTVGLRLDHELDFGNGTVQHRYDAHGSVVKVNHYPTPLPGQPPTGYVGLTIAGPD ARRYEGRHPDGDAVRVVPSGTDGVVGIGITVRTPDTARLMRFYTEAMAFDRVAEDVARCGDTLLFVTPGPGGRPCNDFVG LAFRYLTVQIDDADLAMQEIVARGGSVARDPVTFGTVARYGFVADPDGNWIEISARGSLGGHVPPVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24698; Mature: 24698
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLKPHLDIGLFTNQIAQQRSFWSDTVGLRLDHELDFGNGTVQHRYDAHGSVVKVNHYP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECEEECCCCCEEEEECCCCCEEEECCCC TPLPGQPPTGYVGLTIAGPDARRYEGRHPDGDAVRVVPSGTDGVVGIGITVRTPDTARLM CCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHH RFYTEAMAFDRVAEDVARCGDTLLFVTPGPGGRPCNDFVGLAFRYLTVQIDDADLAMQEI HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHEEEEEEEEEECCHHHHHHHH VARGGSVARDPVTFGTVARYGFVADPDGNWIEISARGSLGGHVPPVDR HHCCCCCCCCCCCHHHHHHCCEEECCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRLLKPHLDIGLFTNQIAQQRSFWSDTVGLRLDHELDFGNGTVQHRYDAHGSVVKVNHYP CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECEEECCCCCEEEEECCCCCEEEECCCC TPLPGQPPTGYVGLTIAGPDARRYEGRHPDGDAVRVVPSGTDGVVGIGITVRTPDTARLM CCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHH RFYTEAMAFDRVAEDVARCGDTLLFVTPGPGGRPCNDFVGLAFRYLTVQIDDADLAMQEI HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHEEEEEEEEEECCHHHHHHHH VARGGSVARDPVTFGTVARYGFVADPDGNWIEISARGSLGGHVPPVDR HHCCCCCCCCCCCHHHHHHCCEEECCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA