| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266136
Identifier: 124266136
GI number: 124266136
Start: 997024
End: 999399
Strand: Reverse
Name: 124266136
Synonym: Mpe_A0943
Alternate gene names: NA
Gene position: 999399-997024 (Counterclockwise)
Preceding gene: 124266137
Following gene: 124266135
Centisome position: 24.71
GC content: 65.24
Gene sequence:
>2376_bases GTGAAGAATGCAACGTTCGGAAAAATCGAGAGGGCGTTCGAGCGCCTGATCCACCACCGCCGCTGGGTGGTGCTGACGGT GGCGCTGCTGACGGCGGTGATGGGCTACCTGGCCACCCACGTCGAGGTGAAGACGATCTTCAGCGACCTGCTGCCGAAGA ACCACCCCTATGTGGCGGTGAACCAGAAGTTCAAGTCGACCTTCGGCGGCTCGAACATGGTCAGCATCATGGTCGAGACC GACAATGGCGACATCTTCGACACGAAGGTGCTGCAGAAGGTGCAGAAGCTGACGGTCGGCCTGCAACAGGTCGACAGCGT CGACACCTACCAGATCGTCTCGATCGCCTCCAAGAAGATCAAGGAGGTGCGGGCCTCGACCGAGGGCGTGGAGTCGCGCC CGATCATGTGGCCCAACCTGCCGCAGACCCCGGGCGAGATGGCGGTGCTGAAGGAGGCGGTGCTCAACAACCCGCTGATC TACGGCCCCTACGTCTCGATGGACCTCAAGGCCACGCTGATCACGGCCGACTTCCTCGACGGCGAGATCAACTACAGCAA GGCCTTCGACCAGATCATGGGCTTGGTCAAGGAGGCATCGGGCGACGGCGTCAAGGTGCGGGTGGTGGGCGAACCGGTGC TGTACGGCTGGGTCAACTTCTACCTCGACGAGACGCTCAAGATCTTCTTCGCAGCGATCGCCTCGCTGGTGCTGATCCTG ATGCTGATCACGCGCACCTGGCACGGCACCCTGCTGCCGCTGCTGGCCGGCGTGGTGAGCGCGATCTGGGCGCTCGGCGC CGCCCGGTTGATGGGCTTCCACCTCGACCCGCTGGTGATCGTGGTGGCGTTCCTGATCACCGCGCAGGCGATCTCGAACT CGGTGCAGCTGATATCGCGCTACGACGACGAGATCGCCGCCGGCGCCACCAGCTCGGCCGCCGCGGCCCTGGCCAGCGTG AAGAACCTCTTCAAGCCCAGCATGCTGGCGATCGTGGCCGACGCCGGCTGCGTGCTGGTGGTGGCGCTCACGCCGATCCC GATGCTGGAGAAGATCTCCTACATCGGCACGGTGTGGATCTTCTCGATCCTGGTCAGCGCGCTGCTGCTGACGCCGGTGA TGCTGTCGTACTTCAAGCCGAAGCAGAGCTACGTACATCCACTGAACATCCGCCCGCTGCTCGACGCGGTGCTGCGCCTG TGCGCCAAGATCGTGACCACGCGCTGGCGCTACGGCGTGCTGGGCACCGCGCTGGTGGTGTTCTTCGTGTCGGGCTGGTA CGCCTTCAACCTGAAGGTCGGCGACGCGAACCCGGGTTCGCCGATCCTGTGGCCGGACTCCTCCTACAACCGAGACGCCA CCGATATCAACCGCCAGTTCCAGGGTTCGGATCGCATGTTCGTGGTGGTCGCCGGCAAGGAGAAGGGTGCGCTGCGCGAG CCGGAAGTGCTCAAGAGCATGAGCGACTTCCAGCGCTACATGGAGGCCCAGCCGGAGGTCGGCGGCAGCATCTCGCTGGC CGACGTGCTGCCCCAGGTGCGCCGCGTGCTGCGCGAAGGCAACCCGATGTACGCCGAACTCGGCAACGACGCCAACGAGA ACGGCGAGCTGACCTACATGTTCGTCTCCGGCTCCGACCCGGGCGACATGGACCGCTACGCCGACGCCGACGCGAAGAAC GGCGCCGTGACCCTGTTCTTCCGCGACCACCAGGGCGAGACCATCCGCACCGCGATCGCCCGCGTGCAGGACTACGTGGC GCAGAACGCGATGGAGAAGGCGGACTACCTGCTGGCCGGCGGCCTGGTGGGCGTGCTGGCGGCGGTGAACGAGGTCATCC TCGCGGGTCAGATCGAGGCCATCGCGCTGGCACTGCTGGTGCTGGTGGTGTGCTGCACGGTGACCTACCGCTCCACCGTG GCCGGGGTGTTCTTCATGATCCCGGTGATGCTGTCCAACACCATCACGTTCAGCTACATGGCCTGGCACGGCATCGGCAT GAACATCAACACGCTGCCGGTGGTGGCGCTGGGCATCGGCCTGGGGGTGGACTACACCTTCTACATCGTCGACGGCATCC GCGAGGAACTGCACCACTCCGACAACGTCGAGGCCGCCATCATCAAGGCGCTCAGCAGCGCCGGCCGCGGGGTCCTGATC ACCGCGCTCACGCTGATCACCAGCGTCGGGCTGTGGAGCTTCTCGTCGCTGCGGCTGCAGGCCGACATGGGCCTGCTGAT CGCGCTCTGGCTGTTCATCTCGGCCTTCAGCGCGCTCTTCATCATGCCGGCGATCGTCTACGTGTTCCGCCCCGCCTTCA TCGTGGGCAGCAAGCAGCGCCCGATCGAGCGCGCCAGTTCCGCAGTGGTTGTGTGA
Upstream 100 bases:
>100_bases GGCCCGCGCTACTACCTGGCCGGCGCCAACCTCGCCGTGCTCGAAGGCGACCAGCTGACCGTCGCCGGTCGCTGACACGA ACAAAAAGGAGGAGACGGCT
Downstream 100 bases:
>100_bases GGGTGCCAGCCACTCGCGACGGCGCCGCTCCGGCGACGCCGTGCGGATCCGTGCTGGCTAATTTCTGGTTCTAGTGAAAA GACGAAAGGAACGGAGACAT
Product: RND efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MKNATFGKIERAFERLIHHRRWVVLTVALLTAVMGYLATHVEVKTIFSDLLPKNHPYVAVNQKFKSTFGGSNMVSIMVET DNGDIFDTKVLQKVQKLTVGLQQVDSVDTYQIVSIASKKIKEVRASTEGVESRPIMWPNLPQTPGEMAVLKEAVLNNPLI YGPYVSMDLKATLITADFLDGEINYSKAFDQIMGLVKEASGDGVKVRVVGEPVLYGWVNFYLDETLKIFFAAIASLVLIL MLITRTWHGTLLPLLAGVVSAIWALGAARLMGFHLDPLVIVVAFLITAQAISNSVQLISRYDDEIAAGATSSAAAALASV KNLFKPSMLAIVADAGCVLVVALTPIPMLEKISYIGTVWIFSILVSALLLTPVMLSYFKPKQSYVHPLNIRPLLDAVLRL CAKIVTTRWRYGVLGTALVVFFVSGWYAFNLKVGDANPGSPILWPDSSYNRDATDINRQFQGSDRMFVVVAGKEKGALRE PEVLKSMSDFQRYMEAQPEVGGSISLADVLPQVRRVLREGNPMYAELGNDANENGELTYMFVSGSDPGDMDRYADADAKN GAVTLFFRDHQGETIRTAIARVQDYVAQNAMEKADYLLAGGLVGVLAAVNEVILAGQIEAIALALLVLVVCCTVTYRSTV AGVFFMIPVMLSNTITFSYMAWHGIGMNINTLPVVALGIGLGVDYTFYIVDGIREELHHSDNVEAAIIKALSSAGRGVLI TALTLITSVGLWSFSSLRLQADMGLLIALWLFISAFSALFIMPAIVYVFRPAFIVGSKQRPIERASSAVVV
Sequences:
>Translated_791_residues MKNATFGKIERAFERLIHHRRWVVLTVALLTAVMGYLATHVEVKTIFSDLLPKNHPYVAVNQKFKSTFGGSNMVSIMVET DNGDIFDTKVLQKVQKLTVGLQQVDSVDTYQIVSIASKKIKEVRASTEGVESRPIMWPNLPQTPGEMAVLKEAVLNNPLI YGPYVSMDLKATLITADFLDGEINYSKAFDQIMGLVKEASGDGVKVRVVGEPVLYGWVNFYLDETLKIFFAAIASLVLIL MLITRTWHGTLLPLLAGVVSAIWALGAARLMGFHLDPLVIVVAFLITAQAISNSVQLISRYDDEIAAGATSSAAAALASV KNLFKPSMLAIVADAGCVLVVALTPIPMLEKISYIGTVWIFSILVSALLLTPVMLSYFKPKQSYVHPLNIRPLLDAVLRL CAKIVTTRWRYGVLGTALVVFFVSGWYAFNLKVGDANPGSPILWPDSSYNRDATDINRQFQGSDRMFVVVAGKEKGALRE PEVLKSMSDFQRYMEAQPEVGGSISLADVLPQVRRVLREGNPMYAELGNDANENGELTYMFVSGSDPGDMDRYADADAKN GAVTLFFRDHQGETIRTAIARVQDYVAQNAMEKADYLLAGGLVGVLAAVNEVILAGQIEAIALALLVLVVCCTVTYRSTV AGVFFMIPVMLSNTITFSYMAWHGIGMNINTLPVVALGIGLGVDYTFYIVDGIREELHHSDNVEAAIIKALSSAGRGVLI TALTLITSVGLWSFSSLRLQADMGLLIALWLFISAFSALFIMPAIVYVFRPAFIVGSKQRPIERASSAVVV >Mature_791_residues MKNATFGKIERAFERLIHHRRWVVLTVALLTAVMGYLATHVEVKTIFSDLLPKNHPYVAVNQKFKSTFGGSNMVSIMVET DNGDIFDTKVLQKVQKLTVGLQQVDSVDTYQIVSIASKKIKEVRASTEGVESRPIMWPNLPQTPGEMAVLKEAVLNNPLI YGPYVSMDLKATLITADFLDGEINYSKAFDQIMGLVKEASGDGVKVRVVGEPVLYGWVNFYLDETLKIFFAAIASLVLIL MLITRTWHGTLLPLLAGVVSAIWALGAARLMGFHLDPLVIVVAFLITAQAISNSVQLISRYDDEIAAGATSSAAAALASV KNLFKPSMLAIVADAGCVLVVALTPIPMLEKISYIGTVWIFSILVSALLLTPVMLSYFKPKQSYVHPLNIRPLLDAVLRL CAKIVTTRWRYGVLGTALVVFFVSGWYAFNLKVGDANPGSPILWPDSSYNRDATDINRQFQGSDRMFVVVAGKEKGALRE PEVLKSMSDFQRYMEAQPEVGGSISLADVLPQVRRVLREGNPMYAELGNDANENGELTYMFVSGSDPGDMDRYADADAKN GAVTLFFRDHQGETIRTAIARVQDYVAQNAMEKADYLLAGGLVGVLAAVNEVILAGQIEAIALALLVLVVCCTVTYRSTV AGVFFMIPVMLSNTITFSYMAWHGIGMNINTLPVVALGIGLGVDYTFYIVDGIREELHHSDNVEAAIIKALSSAGRGVLI TALTLITSVGLWSFSSLRLQADMGLLIALWLFISAFSALFIMPAIVYVFRPAFIVGSKQRPIERASSAVVV
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 86322; Mature: 86322
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNATFGKIERAFERLIHHRRWVVLTVALLTAVMGYLATHVEVKTIFSDLLPKNHPYVAV CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NQKFKSTFGGSNMVSIMVETDNGDIFDTKVLQKVQKLTVGLQQVDSVDTYQIVSIASKKI CHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KEVRASTEGVESRPIMWPNLPQTPGEMAVLKEAVLNNPLIYGPYVSMDLKATLITADFLD HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEECCEEEEEEEEEECCC GEINYSKAFDQIMGLVKEASGDGVKVRVVGEPVLYGWVNFYLDETLKIFFAAIASLVLIL CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLITRTWHGTLLPLLAGVVSAIWALGAARLMGFHLDPLVIVVAFLITAQAISNSVQLISR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH YDDEIAAGATSSAAAALASVKNLFKPSMLAIVADAGCVLVVALTPIPMLEKISYIGTVWI HCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHH FSILVSALLLTPVMLSYFKPKQSYVHPLNIRPLLDAVLRLCAKIVTTRWRYGVLGTALVV HHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFVSGWYAFNLKVGDANPGSPILWPDSSYNRDATDINRQFQGSDRMFVVVAGKEKGALRE HHHCCEEEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC PEVLKSMSDFQRYMEAQPEVGGSISLADVLPQVRRVLREGNPMYAELGNDANENGELTYM CHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEE FVSGSDPGDMDRYADADAKNGAVTLFFRDHQGETIRTAIARVQDYVAQNAMEKADYLLAG EEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGVLAAVNEVILAGQIEAIALALLVLVVCCTVTYRSTVAGVFFMIPVMLSNTITFSYM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH AWHGIGMNINTLPVVALGIGLGVDYTFYIVDGIREELHHSDNVEAAIIKALSSAGRGVLI EEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH TALTLITSVGLWSFSSLRLQADMGLLIALWLFISAFSALFIMPAIVYVFRPAFIVGSKQR HHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCC PIERASSAVVV CHHHCCCCCCC >Mature Secondary Structure MKNATFGKIERAFERLIHHRRWVVLTVALLTAVMGYLATHVEVKTIFSDLLPKNHPYVAV CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NQKFKSTFGGSNMVSIMVETDNGDIFDTKVLQKVQKLTVGLQQVDSVDTYQIVSIASKKI CHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KEVRASTEGVESRPIMWPNLPQTPGEMAVLKEAVLNNPLIYGPYVSMDLKATLITADFLD HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCEECCEEEEEEEEEECCC GEINYSKAFDQIMGLVKEASGDGVKVRVVGEPVLYGWVNFYLDETLKIFFAAIASLVLIL CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLITRTWHGTLLPLLAGVVSAIWALGAARLMGFHLDPLVIVVAFLITAQAISNSVQLISR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH YDDEIAAGATSSAAAALASVKNLFKPSMLAIVADAGCVLVVALTPIPMLEKISYIGTVWI HCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHEECCCEEEEEEECCCHHHHHHHHHHHHHH FSILVSALLLTPVMLSYFKPKQSYVHPLNIRPLLDAVLRLCAKIVTTRWRYGVLGTALVV HHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFVSGWYAFNLKVGDANPGSPILWPDSSYNRDATDINRQFQGSDRMFVVVAGKEKGALRE HHHCCEEEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC PEVLKSMSDFQRYMEAQPEVGGSISLADVLPQVRRVLREGNPMYAELGNDANENGELTYM CHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEE FVSGSDPGDMDRYADADAKNGAVTLFFRDHQGETIRTAIARVQDYVAQNAMEKADYLLAG EEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGVLAAVNEVILAGQIEAIALALLVLVVCCTVTYRSTVAGVFFMIPVMLSNTITFSYM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH AWHGIGMNINTLPVVALGIGLGVDYTFYIVDGIREELHHSDNVEAAIIKALSSAGRGVLI EEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH TALTLITSVGLWSFSSLRLQADMGLLIALWLFISAFSALFIMPAIVYVFRPAFIVGSKQR HHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCC PIERASSAVVV CHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]