| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is ubiE [H]
Identifier: 124266125
GI number: 124266125
Start: 986734
End: 987387
Strand: Direct
Name: ubiE [H]
Synonym: Mpe_A0932
Alternate gene names: 124266125
Gene position: 986734-987387 (Clockwise)
Preceding gene: 124266124
Following gene: 124266126
Centisome position: 24.4
GC content: 70.03
Gene sequence:
>654_bases ATGAGCAACTTCTACAACGATCACATCCTGCCGCGCGCGGTCGATGTCATCTGTGGTCTGCCCAGCTTCGAGAGCGGGCG CGCGGAGCTGGTGCCGCAGGCCTCGGGCCGGGTGCTCGAGATCGGCATGGGCACGGGACGCAACCTGCCGTACTACCGCG CTGCCGGACTGCAATGCCTGTGCGGTGTCGATCCCGGCCTGCATGCCCTGGCCCGGCGCCGGGCCGAGGCCGCAGGCCTG GAGATCCAGGCGCTGCCGCTGTCGGCCGAACGCATCCCGGTGGACGACCGCAGCTTCGATTGCGTGGTGTCCACCTTCAC GCTCTGCACCATTCCCGATGCGGCCCAGGCGCTGAAGGAGGTCTACCGCGTGCTGGTGCCGGGCGGGCGCCTGCTGTTCC TGGAGCACGGTGCCGCGCCTGACGCGTCGGTGCGGCGCTGGCAGGACCGCCTCACGCCGTACTGGAGGCCGCTGGCCGGC GGCTGCCATCTCAACCGCGAGATGCCGGGGCTGATCGAGTCGGCGGGCTTCTGGATCGAAAGTCTGCAGCGCCGCTACCG GCCCGGGCCGAGATGGCTGACCAGTCTGTACTCGGGGGTCGCTACACGGCCCCGTTCTCCGGGTCCGACGGATCGAGGCT CGTCGCCGGATTGA
Upstream 100 bases:
>100_bases GCCCAGGCCCGCGCCGGCCCGGTTCGTCAGTTGCCTGTCGTAGTGGCAGGCCGGGGCTGCGGCGTATGCTCGCCGCCACC GCAATCCTCGGTGCGCACGG
Downstream 100 bases:
>100_bases TCCACCAGGGATGCTGTGGCGGGCGTCGTAGACGCTGCCCGACGGGCTGGGGGTCCGCAGTTCGCCGCAGCTGGCCCTGG GAATCCTCCCGGTCGCGATG
Product: putative methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSNFYNDHILPRAVDVICGLPSFESGRAELVPQASGRVLEIGMGTGRNLPYYRAAGLQCLCGVDPGLHALARRRAEAAGL EIQALPLSAERIPVDDRSFDCVVSTFTLCTIPDAAQALKEVYRVLVPGGRLLFLEHGAAPDASVRRWQDRLTPYWRPLAG GCHLNREMPGLIESAGFWIESLQRRYRPGPRWLTSLYSGVATRPRSPGPTDRGSSPD
Sequences:
>Translated_217_residues MSNFYNDHILPRAVDVICGLPSFESGRAELVPQASGRVLEIGMGTGRNLPYYRAAGLQCLCGVDPGLHALARRRAEAAGL EIQALPLSAERIPVDDRSFDCVVSTFTLCTIPDAAQALKEVYRVLVPGGRLLFLEHGAAPDASVRRWQDRLTPYWRPLAG GCHLNREMPGLIESAGFWIESLQRRYRPGPRWLTSLYSGVATRPRSPGPTDRGSSPD >Mature_216_residues SNFYNDHILPRAVDVICGLPSFESGRAELVPQASGRVLEIGMGTGRNLPYYRAAGLQCLCGVDPGLHALARRRAEAAGLE IQALPLSAERIPVDDRSFDCVVSTFTLCTIPDAAQALKEVYRVLVPGGRLLFLEHGAAPDASVRRWQDRLTPYWRPLAGG CHLNREMPGLIESAGFWIESLQRRYRPGPRWLTSLYSGVATRPRSPGPTDRGSSPD
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI164663805, Length=187, Percent_Identity=35.8288770053476, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI89145417, Length=179, Percent_Identity=32.9608938547486, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 23811; Mature: 23680
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFYNDHILPRAVDVICGLPSFESGRAELVPQASGRVLEIGMGTGRNLPYYRAAGLQCL CCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCHHCCCEEE CGVDPGLHALARRRAEAAGLEIQALPLSAERIPVDDRSFDCVVSTFTLCTIPDAAQALKE ECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH VYRVLVPGGRLLFLEHGAAPDASVRRWQDRLTPYWRPLAGGCHLNREMPGLIESAGFWIE HHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHCCCCCCEECCCCCCHHHHHHHHHHH SLQRRYRPGPRWLTSLYSGVATRPRSPGPTDRGSSPD HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SNFYNDHILPRAVDVICGLPSFESGRAELVPQASGRVLEIGMGTGRNLPYYRAAGLQCL CCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCHHCCCEEE CGVDPGLHALARRRAEAAGLEIQALPLSAERIPVDDRSFDCVVSTFTLCTIPDAAQALKE ECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH VYRVLVPGGRLLFLEHGAAPDASVRRWQDRLTPYWRPLAGGCHLNREMPGLIESAGFWIE HHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCHHHCCCCCCEECCCCCCHHHHHHHHHHH SLQRRYRPGPRWLTSLYSGVATRPRSPGPTDRGSSPD HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA