| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266104
Identifier: 124266104
GI number: 124266104
Start: 966811
End: 968124
Strand: Direct
Name: 124266104
Synonym: Mpe_A0911
Alternate gene names: NA
Gene position: 966811-968124 (Clockwise)
Preceding gene: 124266099
Following gene: 124266105
Centisome position: 23.91
GC content: 67.88
Gene sequence:
>1314_bases ATGAAGAATTCGAACACGACCCGACTGATGGAGGCCGCCCGGACCGAACTGCAGGTGGGCGGATCCCTCACCCACGACCC GGGGCGGCGGGCACTGCTGGGCCGCTCCGCCACGGCGGTGGCGGCCGGCGTGACCGCGCTCGCCGCCGGCCGCAGTGCGG CCGCGCCGCTGGCGGTCCCGGCCGCCAACCTGGCGATGGGGCGGGCGCTGCCGGAGAGCGAGTACGGCATGCCGTCGAAG TTCGAGGCGCACGTGAAGCGTCGCCGGACCGATGTCTTCGTCAACAAGCAGAACTTCTCGGACTGGAGCATGACGCCGCT GCACCAGCAGCACGGCACCGTCACGCCCAATGGGCTGATCTACGAGCGCCACCACAACGGCGTTCCGGAGATCAACCCCG ACGAGCACCGCTTCGCGATCCACGGCATGGTGAAGCAGCCGCTGGTGTTCACGATGTCCGACCTGATGAAGTACCCGTCG GTGTCGAAGTTCTATTTCATGGAGTGCTCCGGCAACGGCCTGACCGATTGGCTCAAGGCCGCGTCGAAGACCGTGCAGCA GACGCACGGCATGCTGTCGTGTGCGCAGTGGACGGGCATCCCGGTGTCGACGCTGCTGCAGGAGGCCGGCGTGATGCCCG GAGCGACCTGGGCACTGGCCGAGGGCGCCGACGGCGCGGCGCACGCGCGCAGCATCCCGATGCAGAAGATGCTGGAGGAC GCACTCATCGTCTACGCCGCCAACGGCGAGATGCTGCGGCCCGAGAACGGCTACCCGCTGCGCCTGTTCATCCCGGGGTG GGAGGGCAATGTCAGCATCAAGTGGCTGCGCCGCATCAAGCTGGGTGACCAACCCTGGAACCTGCGCAGCGAGACGGCGC GCTACACCGACCCGATGCCGGACGGGAAGTGGCGACAGTTCAGCTTCGCGATGGAGGCCAAGTCGGTGGTGACCTCGCCG TCGGGGGGCATGACGGTGCGTCCCGGAGAGATCGAGATCCTGGGCTTCGCGTGGTCCGGGCAGGGCAGCATCCGCGCCGT CGACGTGACGCTCGACGGCGGGCGCACCTGGCAGGAGGCCACGCTGGAGCCGCCGGTGCTCGACAAGTGCCTGACCCGCT TCAGGCTGCGCTGGAAATGGGACGGTCGACCGACGTCGATCGCCAGTCGTGCCGTCGACTCGACGGGTTATGTGCAACCC ACCGTGGAAGAGATCAAGAAGGTCCGCGCGATCACCGGCTTCGTGCAGCACCACAACGGCATCTTCCCGTGGTCCATCGA TGCCGCCGGGGAGGTGAAGAATGCGATCGCCTGA
Upstream 100 bases:
>100_bases GTTACTCTACCGACCGATCGGTACAGTTCTCGTGCGCGCCGCGCACCATGACCCGCCGCCGGGGCCTTCGCGTCCGGGCG CTCGACGAGGAAACACGACC
Downstream 100 bases:
>100_bases ACTGTCGTGGTGCGGCCTCGTCGTCGCGTGCTGTCTGGCAGGTTGCGCGGTCCCGGCTGCCGCGCCGAACGCGGCGGCGC CTTCGCCGCACGGCCATGCG
Product: putative sulfite oxidase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Nitrate Reductase; SulfiteCytochrome C Oxidoreductase Subunit A; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Membrane-Bound Oxidoreductase; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Oxidase-Like Oxidoreductase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKNSNTTRLMEAARTELQVGGSLTHDPGRRALLGRSATAVAAGVTALAAGRSAAAPLAVPAANLAMGRALPESEYGMPSK FEAHVKRRRTDVFVNKQNFSDWSMTPLHQQHGTVTPNGLIYERHHNGVPEINPDEHRFAIHGMVKQPLVFTMSDLMKYPS VSKFYFMECSGNGLTDWLKAASKTVQQTHGMLSCAQWTGIPVSTLLQEAGVMPGATWALAEGADGAAHARSIPMQKMLED ALIVYAANGEMLRPENGYPLRLFIPGWEGNVSIKWLRRIKLGDQPWNLRSETARYTDPMPDGKWRQFSFAMEAKSVVTSP SGGMTVRPGEIEILGFAWSGQGSIRAVDVTLDGGRTWQEATLEPPVLDKCLTRFRLRWKWDGRPTSIASRAVDSTGYVQP TVEEIKKVRAITGFVQHHNGIFPWSIDAAGEVKNAIA
Sequences:
>Translated_437_residues MKNSNTTRLMEAARTELQVGGSLTHDPGRRALLGRSATAVAAGVTALAAGRSAAAPLAVPAANLAMGRALPESEYGMPSK FEAHVKRRRTDVFVNKQNFSDWSMTPLHQQHGTVTPNGLIYERHHNGVPEINPDEHRFAIHGMVKQPLVFTMSDLMKYPS VSKFYFMECSGNGLTDWLKAASKTVQQTHGMLSCAQWTGIPVSTLLQEAGVMPGATWALAEGADGAAHARSIPMQKMLED ALIVYAANGEMLRPENGYPLRLFIPGWEGNVSIKWLRRIKLGDQPWNLRSETARYTDPMPDGKWRQFSFAMEAKSVVTSP SGGMTVRPGEIEILGFAWSGQGSIRAVDVTLDGGRTWQEATLEPPVLDKCLTRFRLRWKWDGRPTSIASRAVDSTGYVQP TVEEIKKVRAITGFVQHHNGIFPWSIDAAGEVKNAIA >Mature_437_residues MKNSNTTRLMEAARTELQVGGSLTHDPGRRALLGRSATAVAAGVTALAAGRSAAAPLAVPAANLAMGRALPESEYGMPSK FEAHVKRRRTDVFVNKQNFSDWSMTPLHQQHGTVTPNGLIYERHHNGVPEINPDEHRFAIHGMVKQPLVFTMSDLMKYPS VSKFYFMECSGNGLTDWLKAASKTVQQTHGMLSCAQWTGIPVSTLLQEAGVMPGATWALAEGADGAAHARSIPMQKMLED ALIVYAANGEMLRPENGYPLRLFIPGWEGNVSIKWLRRIKLGDQPWNLRSETARYTDPMPDGKWRQFSFAMEAKSVVTSP SGGMTVRPGEIEILGFAWSGQGSIRAVDVTLDGGRTWQEATLEPPVLDKCLTRFRLRWKWDGRPTSIASRAVDSTGYVQP TVEEIKKVRAITGFVQHHNGIFPWSIDAAGEVKNAIA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=368, Percent_Identity=29.8913043478261, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI74099702, Length=368, Percent_Identity=29.8913043478261, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI74099694, Length=368, Percent_Identity=29.8913043478261, Blast_Score=119, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71992535, Length=276, Percent_Identity=30.0724637681159, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI18859905, Length=337, Percent_Identity=31.7507418397626, Blast_Score=124, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47976; Mature: 47976
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSNTTRLMEAARTELQVGGSLTHDPGRRALLGRSATAVAAGVTALAAGRSAAAPLAVP CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC AANLAMGRALPESEYGMPSKFEAHVKRRRTDVFVNKQNFSDWSMTPLHQQHGTVTPNGLI HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCEE YERHHNGVPEINPDEHRFAIHGMVKQPLVFTMSDLMKYPSVSKFYFMECSGNGLTDWLKA EECCCCCCCCCCCCCCEEEEECHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH ASKTVQQTHGMLSCAQWTGIPVSTLLQEAGVMPGATWALAEGADGAAHARSIPMQKMLED HHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCHHHHHCC ALIVYAANGEMLRPENGYPLRLFIPGWEGNVSIKWLRRIKLGDQPWNLRSETARYTDPMP EEEEEECCCCEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC DGKWRQFSFAMEAKSVVTSPSGGMTVRPGEIEILGFAWSGQGSIRAVDVTLDGGRTWQEA CCCCEEEEEHHHHHHHEECCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHC TLEPPVLDKCLTRFRLRWKWDGRPTSIASRAVDSTGYVQPTVEEIKKVRAITGFVQHHNG CCCCHHHHHHHHHCEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC IFPWSIDAAGEVKNAIA CCCEECCCCHHHHHHCC >Mature Secondary Structure MKNSNTTRLMEAARTELQVGGSLTHDPGRRALLGRSATAVAAGVTALAAGRSAAAPLAVP CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC AANLAMGRALPESEYGMPSKFEAHVKRRRTDVFVNKQNFSDWSMTPLHQQHGTVTPNGLI HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCEE YERHHNGVPEINPDEHRFAIHGMVKQPLVFTMSDLMKYPSVSKFYFMECSGNGLTDWLKA EECCCCCCCCCCCCCCEEEEECHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH ASKTVQQTHGMLSCAQWTGIPVSTLLQEAGVMPGATWALAEGADGAAHARSIPMQKMLED HHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCHHHHHCC ALIVYAANGEMLRPENGYPLRLFIPGWEGNVSIKWLRRIKLGDQPWNLRSETARYTDPMP EEEEEECCCCEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC DGKWRQFSFAMEAKSVVTSPSGGMTVRPGEIEILGFAWSGQGSIRAVDVTLDGGRTWQEA CCCCEEEEEHHHHHHHEECCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHC TLEPPVLDKCLTRFRLRWKWDGRPTSIASRAVDSTGYVQPTVEEIKKVRAITGFVQHHNG CCCCHHHHHHHHHCEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC IFPWSIDAAGEVKNAIA CCCEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA