| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is malT [H]
Identifier: 124266090
GI number: 124266090
Start: 945870
End: 948671
Strand: Reverse
Name: malT [H]
Synonym: Mpe_A0897
Alternate gene names: 124266090
Gene position: 948671-945870 (Counterclockwise)
Preceding gene: 124266092
Following gene: 124266085
Centisome position: 23.46
GC content: 71.95
Gene sequence:
>2802_bases ATGCCCCCGTCGTCGCCCCACCGTCAGCTGCGATCGCACCCGCTCGAGGCCACGACGGACTGGCCCACGCCGCTGGCCGA CGAGCTGGCCTCGACCGAACGTGGCTTCCCGTCGGACGTGCGGATGCACAAGCTGTTCACGCCGCCGGTGTACCCGGGCG CCGTGCCGCGACAGGCCATCCTCGACCGTGTGCTGCAGGACGACAGCCTGCGCGTCACGGTGCTGCAGGGGCCCGCCGGC CACGGCAAGTCGACCACCCTGCAGCAGATCAAGACCGCCCACGAGGCCCGCGGCTGGCGCACCGCCTGGCTCACCCTCGA CGACGCCGACAACGACCCGCGACGCTTCGAGTCGCACCTGGTCGCGGTGATGAGCCTGCTGCACGGCCGTGCCGCGTCGC CCGGCGCCTCGCGCAGCGGCACCGGCGATGCGCCGCGCGATCTGGCCGACTGGATGCTCGACACCCTGTCGGGCCGCATC ACGCCGGCCTCGATCTTCATCGACGAGTTCCAGGCGCTGCGCAACGAGGCCCTGCTGCGCTTCTTCCGCTCGGTGCTCGC GCGCCTGCCGGCCAACGTGCATGTGTTCATCGGCTCCCGCACGCTGCCGGAGATCGGCCTGGCCACGCTGATGGTCAACC GTGTGGCGTCGGTGGTGCGGGCCGACGACCTGCGCTTCACGCCGGGCGAGGTGACGCAGTTCTTCGCCGATTCGGCCAGC CTGCAGGTCAGCGCCGGCGAGGTGGACGCGATCTACCGCCGCACCGAGGGCTGGCCGGCCGGCGTGCAGCTGTTCCGGCT GGCGCTGGTGAGTCCCGAGGTGCGCATGGCGCTGGACGGCGCCGACGACCACGGGCCGCGCGAGCTGGCCGAATACCTGG CCGACAACGTGATGTCGCTGCAGTCGCCGCGCATGCAGGAGTTCCTGCTGAAGACCTCGCTGCTGCAGCGCCTGTCGGCA CCGCTGTGCACCGCCGTGACCGGCTTCGAGGACGCGCAGGAGCTGCTGGTGCGGCTGGAGCGCTCCGGCCTGTTCCTGCG CGCGCTCGACTCCGACAACCGCTGGTTCCGGTACCACGGCCTGTTCTCGACCTACCTGGCCGAGACCCTGCAGCGCAACG GCCCCGAAGCGCTGCGGCAGGTGCACAAGAAGGCGGCGCAGTGGTGCCTGGCGCACGAGCTGCCCGAGGAAGCGATCCAC CACGCGTTGTGCTGCAGGAACTTTCCGCTCGCGGCGTCCACGCTGACCGACTGGTCGTCGCAGCTGGTGGCCGGGGCCGA GCTGATCACGCTGGAGCGCTGGCACGACCGCCTGCCCTTCCACGAGGTGGCGCAGCGGCCGGCGCTGGTGATCCGCGCCG CCTATGCGCTGATGTTCCTGCGCCGCCGCCCCAAGCTGCGGCCGCTGCTGGAGCTGATGGCACCGCAGGCCGGCGGCGGC GACATCGTGCCGACCACCAACCCCGACCTGTGCCGCGCGATGTCCTTCCTGCTGGTGGACGACGACATGGCGGCGGCGGC CGACACCGTCGAGCAGGCCGGCGTGGTGCAGCGCGAGCTGGAGGGCTTCCCGGCCTTCGAGCTGGGAGCCGCCGCGAACG TGCTCGCGCTGGGCAAGGTGGCCAGCGGCGATTTCGAGGGCGCGCGGCAGGCCCTGGCGCTGGCGCGTGCACACCTCGGT CGCGGCGGCGGCTCGTTCGTCGGCGGCTACACCGCCGCCATCACCGGCAGCAACCTGCTCGTGCAGGGCCGGCTGCAGGA GGCGCTGGCGCACCTGCGCGACGAGAACGCGCAGGAGGCGCCGCTCGACACCTCGGTGGCCGGTGCGGCGCTCGCGGCCT GCCACATGTTCGCGCTGTACGAGGCCAACGACCTGGCGACGCTGGAGTCGCTGGCGCACCGCTTCCAGCGCGAGATCTCC GAGTCGGTGACGCTCGACTTCATCGCCGCGGCCCACATCGCCATCTCGCGCATGCACGAGGCGCGCGGGCGCTCCGACGA GGCCGTCGCGGTGCTCGACGAACTGGAGCGCATCGGCCACACCAGCCCCTGGCAACGCCTGGTGGCGGTGAGCGAGTGGG AGCGCGTGCGGCGTGCGCTGGCGGGCGGCGAGATCGAGCGCGCGGTGGCGCTGGCGACGCGCATCGCCCCGGACTCGCGC GACGACGCGCCGCACTGGATCCACCTGGCCGAGGACGTGGAAGGCTCGGGCTACGGGTGGATCCGCCTCGCCATCGCGCG GCACGACCACGCCGACGCCGCGCAGCGCATCGCCCGGGAGCGGGCGCGCCAGACCGGTCGGGTCTACCGCGACATCAAGC TGAGCGTGCTGGAGACCCTGCTCCAGCAACGCATGGGCGCCCGTAACGCCGCCCATCGCTGCCTGCGCAAGGCGCTGCAG CTGGGCCGACGGGGCCGCTACGTGCGCTGCCTGCTCGACGAGGGGGACGGCGTCATCGAGCTGCTGCGCGAGGCCTACCA GAACCTGCTGCGAGGTCACGAACCGGGCGGCGGCACCGGTACCGACCCGGACCGCGACTACATCGAGCTGCTGCTCGAGG CCTCGGGGACCGACCTGGGCCGCCAGGCCGCCGGCAACGCCCTGACCGAGGCACTGTCGGAGCGCGAAAAGGAGATGCTG CGTTTCCTGCTCGACGGCACCACCAACCGCGAGATCGCCGGACGGCTGTTCGTATCGGAGAACACCGTCAAGTTCCACCT GAAGAACATCTACTCCAAGCTCGGCGTCGGCAACCGATTGCAGGCCATCAACACGGCGCGGGCGCTGCGGTTGATCGACT GA
Upstream 100 bases:
>100_bases TGGCCACCCGCTCCCCACCCACCCCCTGGGGGAAGCCCGCAGACCCGTCAGCTGCGCCGCAGCAAACAATCGCTGTTCCG CTGGTTGCCCTGCGAGCCGC
Downstream 100 bases:
>100_bases ACCGACGATCCTTGCTTCGTTACTTCGCTGGAAAGCGGCCTGCGCAGCGGTGGGGCGGGCACCGCGCCGGGCCGCTGTGT TGCGTTCGTGTCCCCCGGCG
Product: ATP-dependent transcriptional regulator-like protein
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 933; Mature: 932
Protein sequence:
>933_residues MPPSSPHRQLRSHPLEATTDWPTPLADELASTERGFPSDVRMHKLFTPPVYPGAVPRQAILDRVLQDDSLRVTVLQGPAG HGKSTTLQQIKTAHEARGWRTAWLTLDDADNDPRRFESHLVAVMSLLHGRAASPGASRSGTGDAPRDLADWMLDTLSGRI TPASIFIDEFQALRNEALLRFFRSVLARLPANVHVFIGSRTLPEIGLATLMVNRVASVVRADDLRFTPGEVTQFFADSAS LQVSAGEVDAIYRRTEGWPAGVQLFRLALVSPEVRMALDGADDHGPRELAEYLADNVMSLQSPRMQEFLLKTSLLQRLSA PLCTAVTGFEDAQELLVRLERSGLFLRALDSDNRWFRYHGLFSTYLAETLQRNGPEALRQVHKKAAQWCLAHELPEEAIH HALCCRNFPLAASTLTDWSSQLVAGAELITLERWHDRLPFHEVAQRPALVIRAAYALMFLRRRPKLRPLLELMAPQAGGG DIVPTTNPDLCRAMSFLLVDDDMAAAADTVEQAGVVQRELEGFPAFELGAAANVLALGKVASGDFEGARQALALARAHLG RGGGSFVGGYTAAITGSNLLVQGRLQEALAHLRDENAQEAPLDTSVAGAALAACHMFALYEANDLATLESLAHRFQREIS ESVTLDFIAAAHIAISRMHEARGRSDEAVAVLDELERIGHTSPWQRLVAVSEWERVRRALAGGEIERAVALATRIAPDSR DDAPHWIHLAEDVEGSGYGWIRLAIARHDHADAAQRIARERARQTGRVYRDIKLSVLETLLQQRMGARNAAHRCLRKALQ LGRRGRYVRCLLDEGDGVIELLREAYQNLLRGHEPGGGTGTDPDRDYIELLLEASGTDLGRQAAGNALTEALSEREKEML RFLLDGTTNREIAGRLFVSENTVKFHLKNIYSKLGVGNRLQAINTARALRLID
Sequences:
>Translated_933_residues MPPSSPHRQLRSHPLEATTDWPTPLADELASTERGFPSDVRMHKLFTPPVYPGAVPRQAILDRVLQDDSLRVTVLQGPAG HGKSTTLQQIKTAHEARGWRTAWLTLDDADNDPRRFESHLVAVMSLLHGRAASPGASRSGTGDAPRDLADWMLDTLSGRI TPASIFIDEFQALRNEALLRFFRSVLARLPANVHVFIGSRTLPEIGLATLMVNRVASVVRADDLRFTPGEVTQFFADSAS LQVSAGEVDAIYRRTEGWPAGVQLFRLALVSPEVRMALDGADDHGPRELAEYLADNVMSLQSPRMQEFLLKTSLLQRLSA PLCTAVTGFEDAQELLVRLERSGLFLRALDSDNRWFRYHGLFSTYLAETLQRNGPEALRQVHKKAAQWCLAHELPEEAIH HALCCRNFPLAASTLTDWSSQLVAGAELITLERWHDRLPFHEVAQRPALVIRAAYALMFLRRRPKLRPLLELMAPQAGGG DIVPTTNPDLCRAMSFLLVDDDMAAAADTVEQAGVVQRELEGFPAFELGAAANVLALGKVASGDFEGARQALALARAHLG RGGGSFVGGYTAAITGSNLLVQGRLQEALAHLRDENAQEAPLDTSVAGAALAACHMFALYEANDLATLESLAHRFQREIS ESVTLDFIAAAHIAISRMHEARGRSDEAVAVLDELERIGHTSPWQRLVAVSEWERVRRALAGGEIERAVALATRIAPDSR DDAPHWIHLAEDVEGSGYGWIRLAIARHDHADAAQRIARERARQTGRVYRDIKLSVLETLLQQRMGARNAAHRCLRKALQ LGRRGRYVRCLLDEGDGVIELLREAYQNLLRGHEPGGGTGTDPDRDYIELLLEASGTDLGRQAAGNALTEALSEREKEML RFLLDGTTNREIAGRLFVSENTVKFHLKNIYSKLGVGNRLQAINTARALRLID >Mature_932_residues PPSSPHRQLRSHPLEATTDWPTPLADELASTERGFPSDVRMHKLFTPPVYPGAVPRQAILDRVLQDDSLRVTVLQGPAGH GKSTTLQQIKTAHEARGWRTAWLTLDDADNDPRRFESHLVAVMSLLHGRAASPGASRSGTGDAPRDLADWMLDTLSGRIT PASIFIDEFQALRNEALLRFFRSVLARLPANVHVFIGSRTLPEIGLATLMVNRVASVVRADDLRFTPGEVTQFFADSASL QVSAGEVDAIYRRTEGWPAGVQLFRLALVSPEVRMALDGADDHGPRELAEYLADNVMSLQSPRMQEFLLKTSLLQRLSAP LCTAVTGFEDAQELLVRLERSGLFLRALDSDNRWFRYHGLFSTYLAETLQRNGPEALRQVHKKAAQWCLAHELPEEAIHH ALCCRNFPLAASTLTDWSSQLVAGAELITLERWHDRLPFHEVAQRPALVIRAAYALMFLRRRPKLRPLLELMAPQAGGGD IVPTTNPDLCRAMSFLLVDDDMAAAADTVEQAGVVQRELEGFPAFELGAAANVLALGKVASGDFEGARQALALARAHLGR GGGSFVGGYTAAITGSNLLVQGRLQEALAHLRDENAQEAPLDTSVAGAALAACHMFALYEANDLATLESLAHRFQREISE SVTLDFIAAAHIAISRMHEARGRSDEAVAVLDELERIGHTSPWQRLVAVSEWERVRRALAGGEIERAVALATRIAPDSRD DAPHWIHLAEDVEGSGYGWIRLAIARHDHADAAQRIARERARQTGRVYRDIKLSVLETLLQQRMGARNAAHRCLRKALQL GRRGRYVRCLLDEGDGVIELLREAYQNLLRGHEPGGGTGTDPDRDYIELLLEASGTDLGRQAAGNALTEALSEREKEMLR FLLDGTTNREIAGRLFVSENTVKFHLKNIYSKLGVGNRLQAINTARALRLID
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=442, Percent_Identity=28.5067873303167, Blast_Score=159, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 102822; Mature: 102691
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSSPHRQLRSHPLEATTDWPTPLADELASTERGFPSDVRMHKLFTPPVYPGAVPRQAI CCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEECCCCCCCCCCHHHH LDRVLQDDSLRVTVLQGPAGHGKSTTLQQIKTAHEARGWRTAWLTLDDADNDPRRFESHL HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHH VAVMSLLHGRAASPGASRSGTGDAPRDLADWMLDTLSGRITPASIFIDEFQALRNEALLR HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FFRSVLARLPANVHVFIGSRTLPEIGLATLMVNRVASVVRADDLRFTPGEVTQFFADSAS HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC LQVSAGEVDAIYRRTEGWPAGVQLFRLALVSPEVRMALDGADDHGPRELAEYLADNVMSL EEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHH QSPRMQEFLLKTSLLQRLSAPLCTAVTGFEDAQELLVRLERSGLFLRALDSDNRWFRYHG CCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHH LFSTYLAETLQRNGPEALRQVHKKAAQWCLAHELPEEAIHHALCCRNFPLAASTLTDWSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHH QLVAGAELITLERWHDRLPFHEVAQRPALVIRAAYALMFLRRRPKLRPLLELMAPQAGGG HHHHCHHHEEHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC DIVPTTNPDLCRAMSFLLVDDDMAAAADTVEQAGVVQRELEGFPAFELGAAANVLALGKV CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCC ASGDFEGARQALALARAHLGRGGGSFVGGYTAAITGSNLLVQGRLQEALAHLRDENAQEA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCC PLDTSVAGAALAACHMFALYEANDLATLESLAHRFQREISESVTLDFIAAAHIAISRMHE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARGRSDEAVAVLDELERIGHTSPWQRLVAVSEWERVRRALAGGEIERAVALATRIAPDSR HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC DDAPHWIHLAEDVEGSGYGWIRLAIARHDHADAAQRIARERARQTGRVYRDIKLSVLETL CCCCCEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQQRMGARNAAHRCLRKALQLGRRGRYVRCLLDEGDGVIELLREAYQNLLRGHEPGGGTG HHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC TDPDRDYIELLLEASGTDLGRQAAGNALTEALSEREKEMLRFLLDGTTNREIAGRLFVSE CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEC NTVKFHLKNIYSKLGVGNRLQAINTARALRLID CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PPSSPHRQLRSHPLEATTDWPTPLADELASTERGFPSDVRMHKLFTPPVYPGAVPRQAI CCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEECCCCCCCCCCHHHH LDRVLQDDSLRVTVLQGPAGHGKSTTLQQIKTAHEARGWRTAWLTLDDADNDPRRFESHL HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHH VAVMSLLHGRAASPGASRSGTGDAPRDLADWMLDTLSGRITPASIFIDEFQALRNEALLR HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FFRSVLARLPANVHVFIGSRTLPEIGLATLMVNRVASVVRADDLRFTPGEVTQFFADSAS HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC LQVSAGEVDAIYRRTEGWPAGVQLFRLALVSPEVRMALDGADDHGPRELAEYLADNVMSL EEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHH QSPRMQEFLLKTSLLQRLSAPLCTAVTGFEDAQELLVRLERSGLFLRALDSDNRWFRYHG CCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHH LFSTYLAETLQRNGPEALRQVHKKAAQWCLAHELPEEAIHHALCCRNFPLAASTLTDWSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHH QLVAGAELITLERWHDRLPFHEVAQRPALVIRAAYALMFLRRRPKLRPLLELMAPQAGGG HHHHCHHHEEHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC DIVPTTNPDLCRAMSFLLVDDDMAAAADTVEQAGVVQRELEGFPAFELGAAANVLALGKV CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCC ASGDFEGARQALALARAHLGRGGGSFVGGYTAAITGSNLLVQGRLQEALAHLRDENAQEA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCC PLDTSVAGAALAACHMFALYEANDLATLESLAHRFQREISESVTLDFIAAAHIAISRMHE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARGRSDEAVAVLDELERIGHTSPWQRLVAVSEWERVRRALAGGEIERAVALATRIAPDSR HCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC DDAPHWIHLAEDVEGSGYGWIRLAIARHDHADAAQRIARERARQTGRVYRDIKLSVLETL CCCCCEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQQRMGARNAAHRCLRKALQLGRRGRYVRCLLDEGDGVIELLREAYQNLLRGHEPGGGTG HHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC TDPDRDYIELLLEASGTDLGRQAAGNALTEALSEREKEMLRFLLDGTTNREIAGRLFVSE CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEC NTVKFHLKNIYSKLGVGNRLQAINTARALRLID CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]