| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is tbuC [H]
Identifier: 124266012
GI number: 124266012
Start: 859754
End: 860773
Strand: Direct
Name: tbuC [H]
Synonym: Mpe_A0819
Alternate gene names: 124266012
Gene position: 859754-860773 (Clockwise)
Preceding gene: 124266011
Following gene: 124266013
Centisome position: 21.26
GC content: 63.14
Gene sequence:
>1020_bases GTGAGTCATGCGATCCACATCGACGGGTGTTCAGCAAGCTTCACGCAGCGGGGTCAAGACACCTTGCTTCGCGCCGCGCT GCGCAACGGAGTGGGCTTCCCGTACGAATGCAGTTCTGGGGGATGTGGTAGCTGCAAGTTCGATCTTGTCGCAGGAGAGG TGATGGTGCTCTGGCCCGAAGCACCGGGCCTGACAGAGCGTGACCGTCGCAAGGGTCGTCAGCTGGCCTGCCAATGCGTG CCAACGAGCGATCTCACGATCAGGGTACGCAGCGATCCGGAGTGCGTACCGAGGATCATGCCGCGCCGCCTGCGCGCCCG GCTGATCGGCGTTGTCGACATCACGCACGACCTCCGTGAGTTCCGATTCGCTGGGAAGGAGCCTGCGGACTTTCTACCAG GGCAGTACGCCAGCATTGCGATCGAAGGCGTGAACGCGCCGCGTAGCTACTCCATGTCCAATTTGGCCAATCCGCAAGGC GAGTGGCATTTCCAGATTCGCCGTGTTCCTCGCGGACGGGCCAGCAACATGCTGTTCGACAACGTCAGGTTGAATGACGA GGTGGAGATCGACGGCCCGTACGGGTTGGCCTATCTGCGGAACGACAACGAGCGCGACATCGTCTGCGTCGCCGGAGGGT CGGGCCTGGCGCCGATGGTCTCGATCGCGCGTGGTGCGGCGGCTGCCGGATTGCTGGCGACGAGACGATTGCATTTCATC TATGGCGGGCGCGCGCCGCGCGACCTGTGCGGGGAAGCCCAGCTGCGCGCACTTCCGGGTTATGGCGACACCATCAGCTA TCACCCCGTCGTATCGGATGCGCGCAGCGCCGAGGAGGCCGGCTGGACCGGCAATGTCGGATTCGTCCACGAGTGGCTCC CGCGGCTGCTTGGAGATCGAATGGCCGAGCAGGAGATCTATTTCGCCGGTCCGCCGCCGATGACGCAGGCGATCCAGGAA ATGCTGATGGTTCGCTACCGAATTCCGTTCCAGCAGATCCACTTCGACAGGTACTTCTGA
Upstream 100 bases:
>100_bases TCTGTCGGCCGCTTCGGTGGCCGGTCCATCCGACGCCGCGATCACGGATTGCGCCCATCAACGGGTGCAACGGCGGAGCG CTGCCGAGAGGAAAATCCAC
Downstream 100 bases:
>100_bases TCGATCCCTGAACAACGAGGAGGAAAGCGATGAAAGCCGCCGTCTATTTCGGTCCTGAGCAGATTCGACCCGTCGATATT CCGGATGCCGCCATCGGGCA
Product: toluene monooxygenase oxidoreductase
Products: NA
Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSHAIHIDGCSASFTQRGQDTLLRAALRNGVGFPYECSSGGCGSCKFDLVAGEVMVLWPEAPGLTERDRRKGRQLACQCV PTSDLTIRVRSDPECVPRIMPRRLRARLIGVVDITHDLREFRFAGKEPADFLPGQYASIAIEGVNAPRSYSMSNLANPQG EWHFQIRRVPRGRASNMLFDNVRLNDEVEIDGPYGLAYLRNDNERDIVCVAGGSGLAPMVSIARGAAAAGLLATRRLHFI YGGRAPRDLCGEAQLRALPGYGDTISYHPVVSDARSAEEAGWTGNVGFVHEWLPRLLGDRMAEQEIYFAGPPPMTQAIQE MLMVRYRIPFQQIHFDRYF
Sequences:
>Translated_339_residues MSHAIHIDGCSASFTQRGQDTLLRAALRNGVGFPYECSSGGCGSCKFDLVAGEVMVLWPEAPGLTERDRRKGRQLACQCV PTSDLTIRVRSDPECVPRIMPRRLRARLIGVVDITHDLREFRFAGKEPADFLPGQYASIAIEGVNAPRSYSMSNLANPQG EWHFQIRRVPRGRASNMLFDNVRLNDEVEIDGPYGLAYLRNDNERDIVCVAGGSGLAPMVSIARGAAAAGLLATRRLHFI YGGRAPRDLCGEAQLRALPGYGDTISYHPVVSDARSAEEAGWTGNVGFVHEWLPRLLGDRMAEQEIYFAGPPPMTQAIQE MLMVRYRIPFQQIHFDRYF >Mature_338_residues SHAIHIDGCSASFTQRGQDTLLRAALRNGVGFPYECSSGGCGSCKFDLVAGEVMVLWPEAPGLTERDRRKGRQLACQCVP TSDLTIRVRSDPECVPRIMPRRLRARLIGVVDITHDLREFRFAGKEPADFLPGQYASIAIEGVNAPRSYSMSNLANPQGE WHFQIRRVPRGRASNMLFDNVRLNDEVEIDGPYGLAYLRNDNERDIVCVAGGSGLAPMVSIARGAAAAGLLATRRLHFIY GGRAPRDLCGEAQLRALPGYGDTISYHPVVSDARSAEEAGWTGNVGFVHEWLPRLLGDRMAEQEIYFAGPPPMTQAIQEM LMVRYRIPFQQIHFDRYF
Specific function: Electron transfer component of toluene 4-monooxygenase complex [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=221, Percent_Identity=27.1493212669683, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322146, Length=241, Percent_Identity=25.7261410788382, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.3 [H]
Molecular weight: Translated: 37640; Mature: 37509
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAIHIDGCSASFTQRGQDTLLRAALRNGVGFPYECSSGGCGSCKFDLVAGEVMVLWPE CCCEEEECCCCCHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECEEEEEECC APGLTERDRRKGRQLACQCVPTSDLTIRVRSDPECVPRIMPRRLRARLIGVVDITHDLRE CCCCCHHHHHCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEHHHHHHHH FRFAGKEPADFLPGQYASIAIEGVNAPRSYSMSNLANPQGEWHFQIRRVPRGRASNMLFD HHCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEE NVRLNDEVEIDGPYGLAYLRNDNERDIVCVAGGSGLAPMVSIARGAAAAGLLATRRLHFI CEECCCEEEECCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEE YGGRAPRDLCGEAQLRALPGYGDTISYHPVVSDARSAEEAGWTGNVGFVHEWLPRLLGDR ECCCCCHHHCCCCCEEECCCCCCCEEECCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHHH MAEQEIYFAGPPPMTQAIQEMLMVRYRIPFQQIHFDRYF HHCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHCCCCCC >Mature Secondary Structure SHAIHIDGCSASFTQRGQDTLLRAALRNGVGFPYECSSGGCGSCKFDLVAGEVMVLWPE CCEEEECCCCCHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECEEEEEECC APGLTERDRRKGRQLACQCVPTSDLTIRVRSDPECVPRIMPRRLRARLIGVVDITHDLRE CCCCCHHHHHCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEHHHHHHHH FRFAGKEPADFLPGQYASIAIEGVNAPRSYSMSNLANPQGEWHFQIRRVPRGRASNMLFD HHCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEE NVRLNDEVEIDGPYGLAYLRNDNERDIVCVAGGSGLAPMVSIARGAAAAGLLATRRLHFI CEECCCEEEECCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEE YGGRAPRDLCGEAQLRALPGYGDTISYHPVVSDARSAEEAGWTGNVGFVHEWLPRLLGDR ECCCCCHHHCCCCCEEECCCCCCCEEECCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHHH MAEQEIYFAGPPPMTQAIQEMLMVRYRIPFQQIHFDRYF HHCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1429451 [H]