| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265984
Identifier: 124265984
GI number: 124265984
Start: 825932
End: 826651
Strand: Reverse
Name: 124265984
Synonym: Mpe_A0791
Alternate gene names: NA
Gene position: 826651-825932 (Counterclockwise)
Preceding gene: 124265985
Following gene: 124265983
Centisome position: 20.44
GC content: 75.56
Gene sequence:
>720_bases ATGTCTGAGGCCCGCAGCCCCGCACTGGCCCTGTGCGACGGCTTGTTTCCCGGCGGCCACGACGTGCGCGCCGAAGGCCT GCTGCTGTGGGGCAGCGGGCGCACGGCCGACGGGCCGGTGGCGGTGGTGGGCACCCGCGAGCACGCGGCGATCGGCGTCG ACCTCGCGCATGCGCTGGCCGCCCGGGTGCTGCAGGTGGTGCGCGAGCATCCCGGCCGGCCGATCCTGATGCTGGTCGAC ACCCAGGGCCAGCAGCTGTCGCGGCGCGACGAGCTGCTCGGCAACGGCGGCTATCTGGCGCACCTGGCCAAGTGCTTCGA GGTCGCGCGCAGCCGCGGCCACCGGCTGCTGAGCCTGGTGTACGGCGAGGCGGTCAGCGGCGGCTTCCTCGCGCTCGGCA TGATCGCCGACCGCACCTATGCGCTGGCCGACGCGCAGATCCGCGTGATGGCACTGCCGGCCATGGCGCGCATCACGCAG ATCCCGATCGAGGCGCTGCAGGAGCTCTGCCGCAGCTCGGCGATCTTCGGGCCCGGCGTCGACAACTACGCGCGGCTGGG GGCCGTCGAGGCGGTGTGGCCACGGGACGCGCTCGCCGAAGGCCTGGTGCAGGCGCTGCGCGGGCCGGCCGGCCCGGACC CGCGCGCCGCGCTCGGCCGCGAGCGCGGCGGCCGCACGCTGGCCCACGACGTGGTGCAGGCGGTGTTGCAGGCCGCCTGA
Upstream 100 bases:
>100_bases GACATCTGGTCGGGCCTGGGTGTGGCCGAGCCGCGGCAGCTGCCGCTGCTCGACACCGAGGCCTTCACCGCCCTCGCCGA CCGCGTGAAGGAGCGCGGCG
Downstream 100 bases:
>100_bases GGCGGGTGCGCGATGGAGTTCGCCCCGCAGAACGCCAGGCCGTGGCGCCACCGCCGCGTGTGGCTCGCGCCGGATCTCGG CCCGGCCGACCTGGCCGGCC
Product: malonate decarboxylase subunit gamma
Products: NA
Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Subunit MdcE; Malonate Decarboxylase Beta Subunit; Malonate Decarboxylase Gamma-Subunit; Beta Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Gamma-Subunit MdcE
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSEARSPALALCDGLFPGGHDVRAEGLLLWGSGRTADGPVAVVGTREHAAIGVDLAHALAARVLQVVREHPGRPILMLVD TQGQQLSRRDELLGNGGYLAHLAKCFEVARSRGHRLLSLVYGEAVSGGFLALGMIADRTYALADAQIRVMALPAMARITQ IPIEALQELCRSSAIFGPGVDNYARLGAVEAVWPRDALAEGLVQALRGPAGPDPRAALGRERGGRTLAHDVVQAVLQAA
Sequences:
>Translated_239_residues MSEARSPALALCDGLFPGGHDVRAEGLLLWGSGRTADGPVAVVGTREHAAIGVDLAHALAARVLQVVREHPGRPILMLVD TQGQQLSRRDELLGNGGYLAHLAKCFEVARSRGHRLLSLVYGEAVSGGFLALGMIADRTYALADAQIRVMALPAMARITQ IPIEALQELCRSSAIFGPGVDNYARLGAVEAVWPRDALAEGLVQALRGPAGPDPRAALGRERGGRTLAHDVVQAVLQAA >Mature_238_residues SEARSPALALCDGLFPGGHDVRAEGLLLWGSGRTADGPVAVVGTREHAAIGVDLAHALAARVLQVVREHPGRPILMLVDT QGQQLSRRDELLGNGGYLAHLAKCFEVARSRGHRLLSLVYGEAVSGGFLALGMIADRTYALADAQIRVMALPAMARITQI PIEALQELCRSSAIFGPGVDNYARLGAVEAVWPRDALAEGLVQALRGPAGPDPRAALGRERGGRTLAHDVVQAVLQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25152; Mature: 25021
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEARSPALALCDGLFPGGHDVRAEGLLLWGSGRTADGPVAVVGTREHAAIGVDLAHALA CCCCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH ARVLQVVREHPGRPILMLVDTQGQQLSRRDELLGNGGYLAHLAKCFEVARSRGHRLLSLV HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH YGEAVSGGFLALGMIADRTYALADAQIRVMALPAMARITQIPIEALQELCRSSAIFGPGV HHHHCCCCHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DNYARLGAVEAVWPRDALAEGLVQALRGPAGPDPRAALGRERGGRTLAHDVVQAVLQAA CHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SEARSPALALCDGLFPGGHDVRAEGLLLWGSGRTADGPVAVVGTREHAAIGVDLAHALA CCCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH ARVLQVVREHPGRPILMLVDTQGQQLSRRDELLGNGGYLAHLAKCFEVARSRGHRLLSLV HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH YGEAVSGGFLALGMIADRTYALADAQIRVMALPAMARITQIPIEALQELCRSSAIFGPGV HHHHCCCCHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DNYARLGAVEAVWPRDALAEGLVQALRGPAGPDPRAALGRERGGRTLAHDVVQAVLQAA CHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA