| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is wcaJ [C]
Identifier: 124265933
GI number: 124265933
Start: 769226
End: 769903
Strand: Direct
Name: wcaJ [C]
Synonym: Mpe_A0740
Alternate gene names: 124265933
Gene position: 769226-769903 (Clockwise)
Preceding gene: 124265919
Following gene: 124265934
Centisome position: 19.02
GC content: 64.6
Gene sequence:
>678_bases ATGACTGCTGCTGCCTACATTCTGAATGCGCTACAGGTGAAGGGCCGGACGGGCGTCCGCCATTCGCTGCTCGATGCGTC GAGCACCGTGTTCAATCAAGTGCTCGCGCTCATCATCCTGGTGCTGCTGAGCCCCGTGATGCTGGTCGTCTCGTGGTTGA TCTGGCGTCGCGACGGCGCGCCGATCTTCTTCGGGCACTACCGCGTCGGGCGTGATGGTCGGCTGTTCCGGTGCCTCAAG TTCCGCACCATGTTCGTCAACTCCGAGCAGATGCTCTCGGACCTGTTGAAGAAGGACCCGCAGGCCCAGGCCGAGTGGGC ACGTGATCACAAGCTGTCGAACGATCCTCGCATCACCCCGGTGGGCGATTTCCTCCGCCGCACCAGCCTCGACGAGCTGC CACAACTGTTCAACGTGCTGCGCGGCGAAATGAGTCTCGTGGGTCCACGTCCCATCACGGTGCCGGAACTCACGCGCTAC GGCCGTGTGCGCTGGCACTACCTCAGCGTGCGGCCCGGCATGACCGGCCTGTGGCAGGTGAGCGGCCGCAACGAGACCAC CTACAGCGAGCGGGTCGCGATGGACCGCTATTACGTGGGCCGCCGCTCGTTCTGGTTGAACGCCTGGATCATCGTGCAGA CGGTCGCCGTTGTCGCAACGCGGCGCGGCGCACGGTGA
Upstream 100 bases:
>100_bases CGTCGCCGGATCCGTAAGCCGGTGTAACTCCCAATTCTTTTTTGGCAAGAATCTTGCACTGCAGCATTTGCGCCGCAAAA TCGGTCGACGGAGATCCCAC
Downstream 100 bases:
>100_bases GGGTTGCCGACTTGCGTCGCAAGAGGTCGCATTGAGGGGCGCGGATCGCTCAGGAGACGGGCCTGCACCGAGTCGGAGTA CGGGTGTGGCCTCCTCGGGC
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTAAAYILNALQVKGRTGVRHSLLDASSTVFNQVLALIILVLLSPVMLVVSWLIWRRDGAPIFFGHYRVGRDGRLFRCLK FRTMFVNSEQMLSDLLKKDPQAQAEWARDHKLSNDPRITPVGDFLRRTSLDELPQLFNVLRGEMSLVGPRPITVPELTRY GRVRWHYLSVRPGMTGLWQVSGRNETTYSERVAMDRYYVGRRSFWLNAWIIVQTVAVVATRRGAR
Sequences:
>Translated_225_residues MTAAAYILNALQVKGRTGVRHSLLDASSTVFNQVLALIILVLLSPVMLVVSWLIWRRDGAPIFFGHYRVGRDGRLFRCLK FRTMFVNSEQMLSDLLKKDPQAQAEWARDHKLSNDPRITPVGDFLRRTSLDELPQLFNVLRGEMSLVGPRPITVPELTRY GRVRWHYLSVRPGMTGLWQVSGRNETTYSERVAMDRYYVGRRSFWLNAWIIVQTVAVVATRRGAR >Mature_224_residues TAAAYILNALQVKGRTGVRHSLLDASSTVFNQVLALIILVLLSPVMLVVSWLIWRRDGAPIFFGHYRVGRDGRLFRCLKF RTMFVNSEQMLSDLLKKDPQAQAEWARDHKLSNDPRITPVGDFLRRTSLDELPQLFNVLRGEMSLVGPRPITVPELTRYG RVRWHYLSVRPGMTGLWQVSGRNETTYSERVAMDRYYVGRRSFWLNAWIIVQTVAVVATRRGAR
Specific function: May function as a sugar transferase [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=190, Percent_Identity=41.0526315789474, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 25876; Mature: 25744
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAAYILNALQVKGRTGVRHSLLDASSTVFNQVLALIILVLLSPVMLVVSWLIWRRDGA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIFFGHYRVGRDGRLFRCLKFRTMFVNSEQMLSDLLKKDPQAQAEWARDHKLSNDPRITP CEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCH VGDFLRRTSLDELPQLFNVLRGEMSLVGPRPITVPELTRYGRVRWHYLSVRPGMTGLWQV HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEECCCCCEEEEE SGRNETTYSERVAMDRYYVGRRSFWLNAWIIVQTVAVVATRRGAR CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAAAYILNALQVKGRTGVRHSLLDASSTVFNQVLALIILVLLSPVMLVVSWLIWRRDGA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIFFGHYRVGRDGRLFRCLKFRTMFVNSEQMLSDLLKKDPQAQAEWARDHKLSNDPRITP CEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCH VGDFLRRTSLDELPQLFNVLRGEMSLVGPRPITVPELTRYGRVRWHYLSVRPGMTGLWQV HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEECCCCCEEEEE SGRNETTYSERVAMDRYYVGRRSFWLNAWIIVQTVAVVATRRGAR CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]