| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265918
Identifier: 124265918
GI number: 124265918
Start: 751656
End: 753017
Strand: Direct
Name: 124265918
Synonym: Mpe_A0725
Alternate gene names: NA
Gene position: 751656-753017 (Clockwise)
Preceding gene: 124265917
Following gene: 124265919
Centisome position: 18.59
GC content: 66.67
Gene sequence:
>1362_bases ATGCACAGCCTCTCCACCACGGCCCCGTTCGACGCCCAGGCGCCGCTGGACGCTGCCGACACGCGGCACCAGGGCCGGGC GCTGCGCGGCGCCATCGTGTTCCTGCTGCTCTCCACCACCGTGCTGCAGCGCTTCGGGCTGAACTTCGGCAGCTATTCGG CCAACGTCACCTTGCTGGCGATGTTCGGCGTGCTCGGCGTGGCGCTGGCATCCAGCCGGCTGAGCTTTGCGGTCGAGCGC GTGTTCCTCTACGTGCTGTGCATCGCCGTCGCGGCGGCCAGCATGCTGACCAACCTGAACTTCTCGCAGATCGACCGTTC GTCGTTCTCGTCGCTGCTGCTGCTGGTGGTGATGTTCGTGCCCTTCCTGTTCGTCCTCAAGCCCGACCCCACCGGTCGCA ACGACGCCGACTGGGTGATGCGCTGCTTCTCCAACATCGCGCTGTTCTGCGCTTTCGCGGGCATCGCGCAGTTCTTCACC CAATTCGTGATGAAGCCCCCGTGGCTGTTCGACTTCACCGAATCCATTCCCTTCATCCTGCGAGGGCCGAGCGGATTCAA CACCGTCATCCCGGTCGGTTCGCTGTTCAAGTCCAACGGTTTCTTCTTCCGCGAGCCGTCGGGCTTCTCGTTCACCATGG CGTTCGCGCTGCTGGTCGAGGTGGCGCTCTACAAGCGCCTGCCGCGCATCGGCGCGTTCGCGCTGGCACTGCTGCTCACC TATTCGGGCACCGGCATCCTGGCGCTGTTCATCGGCTTGCTGTTCCCGCTGGGCCTGCGCACGGTGCTGCGGCTGGGCGC GGTGGCGCTGGTCGGCGGCCTGGCGGTGCTGGTGCTGGGCGACGCACTGAACCTGTCGTTCACGCTCGGCCGCATCGGCG AGTTCGGCTCCGAGCGCAGCAGCGCCTACATCCGCTACATCGCGCCTTTCCGCGTCATCGCCGACACGATGATGAGCGAC GCCTGGAGCTTCTGGCTGGGCCACGGGCCCGGCACCATCTACCGGCTCGGCCCGTCGTCGTCCTACGACTTCCACGACCC CACCTGGGCCAAGCTGCTGTTCGAGTACGGCCTTCTGGGCTTCGTCGCCTTCGTGGCGCTGTTTGCCACGGCCTTGTACC GGCCGCGCGTGCCCCAGCAACTGCGTGCCGTGCTGTTCTTCTCGTGGCTGCTGATGGGCGGGCACCTGCTGACACCGGAA AACAACTACATGACGCTGGTGCTGGTCGGCCTGATGCCGCTGGCCGGCGTGGCGCTGGGCCGGCGCGTCGTGACCGAAGC GTCCGCAGATGCCGATGCGGCAGCTTCGTCGCCGCCGGACCCCACGATGGTCGCCAAGCCAAGCGGAACCGAAACGAGAT GA
Upstream 100 bases:
>100_bases CAACCTGGCCATCGGCGGCAACTGGCCCGGCCCGCCGAACGCCGCGTCGATGCCGGCCAGCCTCGAGATCGACTACATCC GCGTCTGGCAGCGCTGAACC
Downstream 100 bases:
>100_bases CGCCCTCCTTGCCGAAGATCAGCGTGGTGATCCCATGCTTCAACTACGCCCGCTACGTGGGGCAGGCCATCGAGAGCGCG CTGGCGCAGGCGCATCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MHSLSTTAPFDAQAPLDAADTRHQGRALRGAIVFLLLSTTVLQRFGLNFGSYSANVTLLAMFGVLGVALASSRLSFAVER VFLYVLCIAVAAASMLTNLNFSQIDRSSFSSLLLLVVMFVPFLFVLKPDPTGRNDADWVMRCFSNIALFCAFAGIAQFFT QFVMKPPWLFDFTESIPFILRGPSGFNTVIPVGSLFKSNGFFFREPSGFSFTMAFALLVEVALYKRLPRIGAFALALLLT YSGTGILALFIGLLFPLGLRTVLRLGAVALVGGLAVLVLGDALNLSFTLGRIGEFGSERSSAYIRYIAPFRVIADTMMSD AWSFWLGHGPGTIYRLGPSSSYDFHDPTWAKLLFEYGLLGFVAFVALFATALYRPRVPQQLRAVLFFSWLLMGGHLLTPE NNYMTLVLVGLMPLAGVALGRRVVTEASADADAAASSPPDPTMVAKPSGTETR
Sequences:
>Translated_453_residues MHSLSTTAPFDAQAPLDAADTRHQGRALRGAIVFLLLSTTVLQRFGLNFGSYSANVTLLAMFGVLGVALASSRLSFAVER VFLYVLCIAVAAASMLTNLNFSQIDRSSFSSLLLLVVMFVPFLFVLKPDPTGRNDADWVMRCFSNIALFCAFAGIAQFFT QFVMKPPWLFDFTESIPFILRGPSGFNTVIPVGSLFKSNGFFFREPSGFSFTMAFALLVEVALYKRLPRIGAFALALLLT YSGTGILALFIGLLFPLGLRTVLRLGAVALVGGLAVLVLGDALNLSFTLGRIGEFGSERSSAYIRYIAPFRVIADTMMSD AWSFWLGHGPGTIYRLGPSSSYDFHDPTWAKLLFEYGLLGFVAFVALFATALYRPRVPQQLRAVLFFSWLLMGGHLLTPE NNYMTLVLVGLMPLAGVALGRRVVTEASADADAAASSPPDPTMVAKPSGTETR >Mature_453_residues MHSLSTTAPFDAQAPLDAADTRHQGRALRGAIVFLLLSTTVLQRFGLNFGSYSANVTLLAMFGVLGVALASSRLSFAVER VFLYVLCIAVAAASMLTNLNFSQIDRSSFSSLLLLVVMFVPFLFVLKPDPTGRNDADWVMRCFSNIALFCAFAGIAQFFT QFVMKPPWLFDFTESIPFILRGPSGFNTVIPVGSLFKSNGFFFREPSGFSFTMAFALLVEVALYKRLPRIGAFALALLLT YSGTGILALFIGLLFPLGLRTVLRLGAVALVGGLAVLVLGDALNLSFTLGRIGEFGSERSSAYIRYIAPFRVIADTMMSD AWSFWLGHGPGTIYRLGPSSSYDFHDPTWAKLLFEYGLLGFVAFVALFATALYRPRVPQQLRAVLFFSWLLMGGHLLTPE NNYMTLVLVGLMPLAGVALGRRVVTEASADADAAASSPPDPTMVAKPSGTETR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49218; Mature: 49218
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLSTTAPFDAQAPLDAADTRHQGRALRGAIVFLLLSTTVLQRFGLNFGSYSANVTLLA CCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH MFGVLGVALASSRLSFAVERVFLYVLCIAVAAASMLTNLNFSQIDRSSFSSLLLLVVMFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PFLFVLKPDPTGRNDADWVMRCFSNIALFCAFAGIAQFFTQFVMKPPWLFDFTESIPFIL HHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCEEE RGPSGFNTVIPVGSLFKSNGFFFREPSGFSFTMAFALLVEVALYKRLPRIGAFALALLLT ECCCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YSGTGILALFIGLLFPLGLRTVLRLGAVALVGGLAVLVLGDALNLSFTLGRIGEFGSERS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEHHHHHHCCCCCC SAYIRYIAPFRVIADTMMSDAWSFWLGHGPGTIYRLGPSSSYDFHDPTWAKLLFEYGLLG CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH FVAFVALFATALYRPRVPQQLRAVLFFSWLLMGGHLLTPENNYMTLVLVGLMPLAGVALG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHH RRVVTEASADADAAASSPPDPTMVAKPSGTETR HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MHSLSTTAPFDAQAPLDAADTRHQGRALRGAIVFLLLSTTVLQRFGLNFGSYSANVTLLA CCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH MFGVLGVALASSRLSFAVERVFLYVLCIAVAAASMLTNLNFSQIDRSSFSSLLLLVVMFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PFLFVLKPDPTGRNDADWVMRCFSNIALFCAFAGIAQFFTQFVMKPPWLFDFTESIPFIL HHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCEEE RGPSGFNTVIPVGSLFKSNGFFFREPSGFSFTMAFALLVEVALYKRLPRIGAFALALLLT ECCCCCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YSGTGILALFIGLLFPLGLRTVLRLGAVALVGGLAVLVLGDALNLSFTLGRIGEFGSERS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEHHHHHHCCCCCC SAYIRYIAPFRVIADTMMSDAWSFWLGHGPGTIYRLGPSSSYDFHDPTWAKLLFEYGLLG CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH FVAFVALFATALYRPRVPQQLRAVLFFSWLLMGGHLLTPENNYMTLVLVGLMPLAGVALG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHH RRVVTEASADADAAASSPPDPTMVAKPSGTETR HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA