| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265876
Identifier: 124265876
GI number: 124265876
Start: 716661
End: 717302
Strand: Reverse
Name: 124265876
Synonym: Mpe_A0683
Alternate gene names: NA
Gene position: 717302-716661 (Counterclockwise)
Preceding gene: 124265877
Following gene: 124265875
Centisome position: 17.74
GC content: 71.96
Gene sequence:
>642_bases ATGCCACACCCGCCCACCATGAGCCGCGACACCCCGCCTGCCTGTCCCGATGCCGACGGTGGCGCCGACGGTGGCGCCGA CGCCGGCGCCCGAGACGACACCGGCGCCACCGCCGTCATCAGCCATCGCGTGCGCCACGACCGCCAGGCCGACTACGAGC GCTGGATGGCCGAGATCGCCCCGCTGAGCCGGGCCGCACCGGGGCACCTGGACTGGCACGTCATCCGCCCCATCCCCGGA CTCACCGAAACGTTCACGGTGATCATCCGCTTCGACACCTGCGAGCACCTGCAGGCCTGGATGGCCTCGGCCGACCGCAA GCGCCTGATCGAGGCGGTGTCCCCGCTGCTGGAGAGCGGCGACGACTTCTTCATCCGCAGCGGGCTGGACTTCTGGTTCA CGCCGGCCGGCGCGAAGGCCCGGCTGCCGGTGCGCTGGAAGCAGGCGCTGGTCACGTGGTCGGCGATCTACCCGCTGGTG CTGCTGGTGCCGCTGCTCGTTGCGCCGGTGCTGAGCGCGCTGGGCCTGGCAGGCCACCCGCCGCTGACGATGCTGGCGGT GACCGGCATCGTGGTCAGCCTGATGGTCTGGGTGGTGATGCCGCGCTACACCCGGCTGCTGCGGCGCTGGCTGTTCGCCT GA
Upstream 100 bases:
>100_bases CCCACCACACGCTGGGCGCTGGGTGCGAGCATGGCCGCACTGGGGCTCGCGTTCCTGCTGGCGCCCAAGGCCTGAGCGCC GGCCGCCCACCCCTCCACCG
Downstream 100 bases:
>100_bases GGCCGGGGCGGCCGAATGCCCGCGCGCCGCCTGCCGCTGCGCGGCGCCCTGCTCGCCTGGCTGGCGATCCTGGCGCTGGC CTTCTTGAACGGCGGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF 2 [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPHPPTMSRDTPPACPDADGGADGGADAGARDDTGATAVISHRVRHDRQADYERWMAEIAPLSRAAPGHLDWHVIRPIPG LTETFTVIIRFDTCEHLQAWMASADRKRLIEAVSPLLESGDDFFIRSGLDFWFTPAGAKARLPVRWKQALVTWSAIYPLV LLVPLLVAPVLSALGLAGHPPLTMLAVTGIVVSLMVWVVMPRYTRLLRRWLFA
Sequences:
>Translated_213_residues MPHPPTMSRDTPPACPDADGGADGGADAGARDDTGATAVISHRVRHDRQADYERWMAEIAPLSRAAPGHLDWHVIRPIPG LTETFTVIIRFDTCEHLQAWMASADRKRLIEAVSPLLESGDDFFIRSGLDFWFTPAGAKARLPVRWKQALVTWSAIYPLV LLVPLLVAPVLSALGLAGHPPLTMLAVTGIVVSLMVWVVMPRYTRLLRRWLFA >Mature_212_residues PHPPTMSRDTPPACPDADGGADGGADAGARDDTGATAVISHRVRHDRQADYERWMAEIAPLSRAAPGHLDWHVIRPIPGL TETFTVIIRFDTCEHLQAWMASADRKRLIEAVSPLLESGDDFFIRSGLDFWFTPAGAKARLPVRWKQALVTWSAIYPLVL LVPLLVAPVLSALGLAGHPPLTMLAVTGIVVSLMVWVVMPRYTRLLRRWLFA
Specific function: Unknown
COG id: COG3224
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23475; Mature: 23343
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPPTMSRDTPPACPDADGGADGGADAGARDDTGATAVISHRVRHDRQADYERWMAEIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PLSRAAPGHLDWHVIRPIPGLTETFTVIIRFDTCEHLQAWMASADRKRLIEAVSPLLESG HHHCCCCCCCCEEEECCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC DDFFIRSGLDFWFTPAGAKARLPVRWKQALVTWSAIYPLVLLVPLLVAPVLSALGLAGHP CCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLTMLAVTGIVVSLMVWVVMPRYTRLLRRWLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHPPTMSRDTPPACPDADGGADGGADAGARDDTGATAVISHRVRHDRQADYERWMAEIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PLSRAAPGHLDWHVIRPIPGLTETFTVIIRFDTCEHLQAWMASADRKRLIEAVSPLLESG HHHCCCCCCCCEEEECCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC DDFFIRSGLDFWFTPAGAKARLPVRWKQALVTWSAIYPLVLLVPLLVAPVLSALGLAGHP CCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLTMLAVTGIVVSLMVWVVMPRYTRLLRRWLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7937823 [H]