| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is xanB [H]
Identifier: 124265822
GI number: 124265822
Start: 663322
End: 664824
Strand: Reverse
Name: xanB [H]
Synonym: Mpe_A0629
Alternate gene names: 124265822
Gene position: 664824-663322 (Counterclockwise)
Preceding gene: 124265825
Following gene: 124265821
Centisome position: 16.44
GC content: 69.79
Gene sequence:
>1503_bases GTGGGACTGCGCTTGCCCCTCACTTTTGCCACCATGCATCACATCACGCCTGTCGTCCTCGCCGGCGGCTCCGGCACGCG GCTCTGGCCACTCAGCCGCGCGCTCTACCCTAAGCAGTTCCTGGCCCTGTCCGGTACGTCGACCCTGTTCCAGCAGGCCT GCCTGAGGTTGGCCGCCCTGGCCGACCCGCACACGACCATCGCCGCGCCGCTGGTGGTCGGCAACGAGGAACACCGGTTC ATGCTGCTGGAGCAGTTGCGCGAGATCGGCACGAGCCAGTCAACCTTGCTGCTCGAGCCCATCGGCCGCAACACGGCGCC CGCCCTCACCCTGGCCGCGCTCGCCAGCCGCGCCGCCCACGGCGACGACAGCATTCTCGTCGTCACGCCGGCGGACCAGA CCGTGACCGACGGCCCGGCCTTCACACGCGCCCTGCGGCAGGCAGTGGCCGCCGCGGCCGACGGCAGCCTCGTCACGCTC GGCATCGTGCCCGACCGCCCCGAGACCGGCTTCGGCTACATCCACAGCGAAGGCGCCGACGCGGTGCGACGCGTCAAGGC CTTCGTCGAGAAGCCCGATCGGGCCACCGCCGAGCGCTACCTCGACGACGGCGGCTACGCCTGGAACAGCGGCATGTTCG TGCTGCGCGCGTCGGTGTGGCTGGCCGCGCTGGCGCATTTCCGGCCCGACATTGCACAAGCCACCGAAGCCGCGTGGGCC GGCCGCAGCACCGACGCGAGCTTCGTGCGGCCCGACAAGGCCGCCTTCGCGGCCATCCCCGGTGAATCGATCGACTATGC GGTGATGGAGCCCTGCCCGGCCGACGCGGCCAGCGGCTTCAGTGTGAAGATGGTGCCGCTGGACGCCGGCTGGAGCGACC TCGGGGCCTGGGACGCGGTGTGGCAGGTCAGCGAGCGCGATGCTCAGGGCAATGCCTCGCACGGCGACGCGCTGATCGAG GACAGCCGCAACACGCTGGTCCACGCGACCAGCCGGCTGGTCGGCGCCATCGGCCTCGACGACGTGATCATCGTGGAAAC GCCGGACGCCGTGCTCGTGACCGATCGCTCGCGCAGCCAGCAGGTCAAGCAGATCGTCGCCAGCCTCCAGCGCGAGGGCC GCAGCGAGGGTACGCTGCATCGGCGCGTCCACCGGCCCTGGGGCTGGTACGACAGCGTGGACGCGGGCGCCCGCTTTCAG GTGAAGCGCATCCTGGTCAAGCCCGGCGCCACGCTGAGCCTGCAGATGCACCACCACCGCGCCGAACACTGGATTGTCGT CTCCGGGACGGCCGAAGTGACCTGCGGCGAGAGCAAGAAGCTGCTGACCGAGAACCAAAGCACCTACATTCCGCTCGGGG AAGTGCACCGGCTGGCGAATCCGGGCTCGATCCCCCTCGAGATCATCGAGGTGCAGTCCGGCAGCTATCTCGGTGAGGAC GACATCGTGCGCTTCTCCGACACCTACGGCAGAGCGGACGGAGTCGGCACGGACCGCAAATGA
Upstream 100 bases:
>100_bases AAGGTCAGGATGGCCGACGCGGCGAACGCGCAGAGAAACAGAAGCATCGGGGCAGTTTACCGAGCGCGCACATCCGGACC CCTTGAGGCGCGCCGCTATA
Downstream 100 bases:
>100_bases TCCTCGTGACCGGCGGTGCCGGTTTCATCGGCAGCAACTTCGTTCTCGACTGGATCGCATCGACCGACGAGCCGGTCGTC AACCTCGACGTCCTCTCCTA
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MGLRLPLTFATMHHITPVVLAGGSGTRLWPLSRALYPKQFLALSGTSTLFQQACLRLAALADPHTTIAAPLVVGNEEHRF MLLEQLREIGTSQSTLLLEPIGRNTAPALTLAALASRAAHGDDSILVVTPADQTVTDGPAFTRALRQAVAAAADGSLVTL GIVPDRPETGFGYIHSEGADAVRRVKAFVEKPDRATAERYLDDGGYAWNSGMFVLRASVWLAALAHFRPDIAQATEAAWA GRSTDASFVRPDKAAFAAIPGESIDYAVMEPCPADAASGFSVKMVPLDAGWSDLGAWDAVWQVSERDAQGNASHGDALIE DSRNTLVHATSRLVGAIGLDDVIIVETPDAVLVTDRSRSQQVKQIVASLQREGRSEGTLHRRVHRPWGWYDSVDAGARFQ VKRILVKPGATLSLQMHHHRAEHWIVVSGTAEVTCGESKKLLTENQSTYIPLGEVHRLANPGSIPLEIIEVQSGSYLGED DIVRFSDTYGRADGVGTDRK
Sequences:
>Translated_500_residues MGLRLPLTFATMHHITPVVLAGGSGTRLWPLSRALYPKQFLALSGTSTLFQQACLRLAALADPHTTIAAPLVVGNEEHRF MLLEQLREIGTSQSTLLLEPIGRNTAPALTLAALASRAAHGDDSILVVTPADQTVTDGPAFTRALRQAVAAAADGSLVTL GIVPDRPETGFGYIHSEGADAVRRVKAFVEKPDRATAERYLDDGGYAWNSGMFVLRASVWLAALAHFRPDIAQATEAAWA GRSTDASFVRPDKAAFAAIPGESIDYAVMEPCPADAASGFSVKMVPLDAGWSDLGAWDAVWQVSERDAQGNASHGDALIE DSRNTLVHATSRLVGAIGLDDVIIVETPDAVLVTDRSRSQQVKQIVASLQREGRSEGTLHRRVHRPWGWYDSVDAGARFQ VKRILVKPGATLSLQMHHHRAEHWIVVSGTAEVTCGESKKLLTENQSTYIPLGEVHRLANPGSIPLEIIEVQSGSYLGED DIVRFSDTYGRADGVGTDRK >Mature_499_residues GLRLPLTFATMHHITPVVLAGGSGTRLWPLSRALYPKQFLALSGTSTLFQQACLRLAALADPHTTIAAPLVVGNEEHRFM LLEQLREIGTSQSTLLLEPIGRNTAPALTLAALASRAAHGDDSILVVTPADQTVTDGPAFTRALRQAVAAAADGSLVTLG IVPDRPETGFGYIHSEGADAVRRVKAFVEKPDRATAERYLDDGGYAWNSGMFVLRASVWLAALAHFRPDIAQATEAAWAG RSTDASFVRPDKAAFAAIPGESIDYAVMEPCPADAASGFSVKMVPLDAGWSDLGAWDAVWQVSERDAQGNASHGDALIED SRNTLVHATSRLVGAIGLDDVIIVETPDAVLVTDRSRSQQVKQIVASLQREGRSEGTLHRRVHRPWGWYDSVDAGARFQV KRILVKPGATLSLQMHHHRAEHWIVVSGTAEVTCGESKKLLTENQSTYIPLGEVHRLANPGSIPLEIIEVQSGSYLGEDD IVRFSDTYGRADGVGTDRK
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=484, Percent_Identity=51.6528925619835, Blast_Score=485, Evalue=1e-138,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 53837; Mature: 53706
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRLPLTFATMHHITPVVLAGGSGTRLWPLSRALYPKQFLALSGTSTLFQQACLRLAAL CCCEEEEHHHHHHCCCEEEEECCCCCEEEEHHHHCCCHHHEEECCCHHHHHHHHHHHHHH ADPHTTIAAPLVVGNEEHRFMLLEQLREIGTSQSTLLLEPIGRNTAPALTLAALASRAAH CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC GDDSILVVTPADQTVTDGPAFTRALRQAVAAAADGSLVTLGIVPDRPETGFGYIHSEGAD CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEECCCHH AVRRVKAFVEKPDRATAERYLDDGGYAWNSGMFVLRASVWLAALAHFRPDIAQATEAAWA HHHHHHHHHCCCCHHHHHHHHCCCCEEECCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHC GRSTDASFVRPDKAAFAAIPGESIDYAVMEPCPADAASGFSVKMVPLDAGWSDLGAWDAV CCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHH WQVSERDAQGNASHGDALIEDSRNTLVHATSRLVGAIGLDDVIIVETPDAVLVTDRSRSQ HHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHH QVKQIVASLQREGRSEGTLHRRVHRPWGWYDSVDAGARFQVKRILVKPGATLSLQMHHHR HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCC AEHWIVVSGTAEVTCGESKKLLTENQSTYIPLGEVHRLANPGSIPLEIIEVQSGSYLGED CCEEEEEECCEEEECCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCC DIVRFSDTYGRADGVGTDRK CCEEEECCCCCCCCCCCCCC >Mature Secondary Structure GLRLPLTFATMHHITPVVLAGGSGTRLWPLSRALYPKQFLALSGTSTLFQQACLRLAAL CCEEEEHHHHHHCCCEEEEECCCCCEEEEHHHHCCCHHHEEECCCHHHHHHHHHHHHHH ADPHTTIAAPLVVGNEEHRFMLLEQLREIGTSQSTLLLEPIGRNTAPALTLAALASRAAH CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC GDDSILVVTPADQTVTDGPAFTRALRQAVAAAADGSLVTLGIVPDRPETGFGYIHSEGAD CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEECCCHH AVRRVKAFVEKPDRATAERYLDDGGYAWNSGMFVLRASVWLAALAHFRPDIAQATEAAWA HHHHHHHHHCCCCHHHHHHHHCCCCEEECCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHC GRSTDASFVRPDKAAFAAIPGESIDYAVMEPCPADAASGFSVKMVPLDAGWSDLGAWDAV CCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHH WQVSERDAQGNASHGDALIEDSRNTLVHATSRLVGAIGLDDVIIVETPDAVLVTDRSRSQ HHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHH QVKQIVASLQREGRSEGTLHRRVHRPWGWYDSVDAGARFQVKRILVKPGATLSLQMHHHR HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCC AEHWIVVSGTAEVTCGESKKLLTENQSTYIPLGEVHRLANPGSIPLEIIEVQSGSYLGED CCEEEEEECCEEEECCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCC DIVRFSDTYGRADGVGTDRK CCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]