| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265744
Identifier: 124265744
GI number: 124265744
Start: 584144
End: 585220
Strand: Reverse
Name: 124265744
Synonym: Mpe_A0551
Alternate gene names: NA
Gene position: 585220-584144 (Counterclockwise)
Preceding gene: 124265749
Following gene: 124265743
Centisome position: 14.47
GC content: 70.1
Gene sequence:
>1077_bases TTGAAAGCGCGGATCGCAACGGAGATCGAGCGCGCCGGAGGCTGGCTCGGCTTCGAGCGCTACATGGAGCTCGTACTGTA TGCACCCGGTCTGGGCTACTACGTGCGCGGCGATCGCCAGTTCGGCCTGATGCCGGGCTCCGGCAGTGATTTCGTCACCG CACCCGAGCTGAGCCCGTTGTTCGGCCGCGCCCTGGCGCGCCAGATGGGCCAGGCGCTGGACGCCACCGGCACGCGCGAA GTGTGGGAGTTCGGCGCCGGTTCGGGAGCGCTGGCCACGCAGTTGCTGGAGGCGCTGGGCGAACGGATCGACCGCTACGT CATCGTCGACCTGTCCGGAGCGCTGCGCGAGCGTCAGCGAACCACGATCGCCGCGCGGGTGCCGCCGCAGCACGCGGCGA AGGCCGTGTGGCTGGACCGCCTGCCGGAGCGGATCGACGGCGTGCTGGTCGGCAACGAGGTGCTCGATGCGATGCCGGTG GCCCTGCTGCACTTCGATGGCCACCAGTGGCTCGAGCGCGGCGTGGTGTTCTCCGACGGCCGCTTCATGTATGCCGACCG CCCGACCTCACTGCGCCCGCCGCTGGCCGCCGACCGCGTACCTGGCACCACCGTCGAACTGCAGCGCCAGGGCGAGGCCT TCATCCGCACGCTGGCCGCCACGCTCCGGCGCGGTGCGGCCTTCTTCATCGACTACGGTTTCCCCGAGGCCGAGTTCCAT CATCCGCAGCGCATCGGCGGCACGCTGATGTGCCACCGCGCGCACCAGGCCGACGGCGACCCGCTGAGCGACGTGGGCGA CAAGGACATCACCGCCCACGTCGATTTCACCGGCATCGCGCTGGCCGGCCAGAACGCCGGGCTCGCGGTGCTGGGCTACA CCACCCAGGCGCGTTTCCTGATGAATTGCGGCCTGCTCGACGACCTGCAGGGCGCCGACCTGCGCGCCATCGCCGCGGCG CAGAAGCTGCTGACCGAGCACGAGATGGGCGAGCTGTTCAAGGTGATCGGCTTCGCGGCCGGCGAGCCTTTCGATGCGAT CGGCTTCGCCCAGGGCGATCGCAGCCACATGCTCTGA
Upstream 100 bases:
>100_bases CGGGACGGGAATCGACGCTCATGTCGTGCGGGACAATGGAGGGGTGGAATCGAGCCCCGTCAGTGTAGCCAGCCCCCCTT TGCCGAGCCTGCAAGAGGCC
Downstream 100 bases:
>100_bases GACCGGAACCCCACCATGCTGCGCTGGCTGCTCGTTGTCGTCATCACGCTGGTCGTCTTCAACGGCCTGCGGCCCTGGCT CCAGAAGTTCGGCCTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKARIATEIERAGGWLGFERYMELVLYAPGLGYYVRGDRQFGLMPGSGSDFVTAPELSPLFGRALARQMGQALDATGTRE VWEFGAGSGALATQLLEALGERIDRYVIVDLSGALRERQRTTIAARVPPQHAAKAVWLDRLPERIDGVLVGNEVLDAMPV ALLHFDGHQWLERGVVFSDGRFMYADRPTSLRPPLAADRVPGTTVELQRQGEAFIRTLAATLRRGAAFFIDYGFPEAEFH HPQRIGGTLMCHRAHQADGDPLSDVGDKDITAHVDFTGIALAGQNAGLAVLGYTTQARFLMNCGLLDDLQGADLRAIAAA QKLLTEHEMGELFKVIGFAAGEPFDAIGFAQGDRSHML
Sequences:
>Translated_358_residues MKARIATEIERAGGWLGFERYMELVLYAPGLGYYVRGDRQFGLMPGSGSDFVTAPELSPLFGRALARQMGQALDATGTRE VWEFGAGSGALATQLLEALGERIDRYVIVDLSGALRERQRTTIAARVPPQHAAKAVWLDRLPERIDGVLVGNEVLDAMPV ALLHFDGHQWLERGVVFSDGRFMYADRPTSLRPPLAADRVPGTTVELQRQGEAFIRTLAATLRRGAAFFIDYGFPEAEFH HPQRIGGTLMCHRAHQADGDPLSDVGDKDITAHVDFTGIALAGQNAGLAVLGYTTQARFLMNCGLLDDLQGADLRAIAAA QKLLTEHEMGELFKVIGFAAGEPFDAIGFAQGDRSHML >Mature_358_residues MKARIATEIERAGGWLGFERYMELVLYAPGLGYYVRGDRQFGLMPGSGSDFVTAPELSPLFGRALARQMGQALDATGTRE VWEFGAGSGALATQLLEALGERIDRYVIVDLSGALRERQRTTIAARVPPQHAAKAVWLDRLPERIDGVLVGNEVLDAMPV ALLHFDGHQWLERGVVFSDGRFMYADRPTSLRPPLAADRVPGTTVELQRQGEAFIRTLAATLRRGAAFFIDYGFPEAEFH HPQRIGGTLMCHRAHQADGDPLSDVGDKDITAHVDFTGIALAGQNAGLAVLGYTTQARFLMNCGLLDDLQGADLRAIAAA QKLLTEHEMGELFKVIGFAAGEPFDAIGFAQGDRSHML
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193211224, Length=325, Percent_Identity=25.5384615384615, Blast_Score=85, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38991; Mature: 38991
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARIATEIERAGGWLGFERYMELVLYAPGLGYYVRGDRQFGLMPGSGSDFVTAPELSPL CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCEECCCCCHH FGRALARQMGQALDATGTREVWEFGAGSGALATQLLEALGERIDRYVIVDLSGALRERQR HHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHH TTIAARVPPQHAAKAVWLDRLPERIDGVLVGNEVLDAMPVALLHFDGHQWLERGVVFSDG CEEEEECCHHHHHHHHHHHHHHHHHCCEEECHHHHHHHCCCEEEECCHHHHHCCCEEECC RFMYADRPTSLRPPLAADRVPGTTVELQRQGEAFIRTLAATLRRGAAFFIDYGFPEAEFH EEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC HPQRIGGTLMCHRAHQADGDPLSDVGDKDITAHVDFTGIALAGQNAGLAVLGYTTQARFL CHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCHHHHHH MNCGLLDDLQGADLRAIAAAQKLLTEHEMGELFKVIGFAAGEPFDAIGFAQGDRSHML HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKARIATEIERAGGWLGFERYMELVLYAPGLGYYVRGDRQFGLMPGSGSDFVTAPELSPL CCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCEECCCCCHH FGRALARQMGQALDATGTREVWEFGAGSGALATQLLEALGERIDRYVIVDLSGALRERQR HHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHH TTIAARVPPQHAAKAVWLDRLPERIDGVLVGNEVLDAMPVALLHFDGHQWLERGVVFSDG CEEEEECCHHHHHHHHHHHHHHHHHCCEEECHHHHHHHCCCEEEECCHHHHHCCCEEECC RFMYADRPTSLRPPLAADRVPGTTVELQRQGEAFIRTLAATLRRGAAFFIDYGFPEAEFH EEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC HPQRIGGTLMCHRAHQADGDPLSDVGDKDITAHVDFTGIALAGQNAGLAVLGYTTQARFL CHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEECCHHHHHH MNCGLLDDLQGADLRAIAAAQKLLTEHEMGELFKVIGFAAGEPFDAIGFAQGDRSHML HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA