| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is hemK [H]
Identifier: 124265715
GI number: 124265715
Start: 559502
End: 560329
Strand: Reverse
Name: hemK [H]
Synonym: Mpe_A0522
Alternate gene names: 124265715
Gene position: 560329-559502 (Counterclockwise)
Preceding gene: 124265716
Following gene: 124265714
Centisome position: 13.86
GC content: 71.26
Gene sequence:
>828_bases GTGCCGCCCCCCGACAGCGTCGCCGCCGCGCTGCTGGCGGCCCGCGAGCGCGGCATCGACCGGCTCGACGCGCAGTGCCT GCTCAGCGCGGTTCTCGCACGCCCCCGCAGCTGGCTGCTGGCGCACGCGGACGAGGCTCTCGATCCCCAGGCAGCCCGTC ACTACGACGCCTTGCTGGCGCGCCGCGCTGCCGGCGAACCCTTGGCCTATGTGCTGGGCGAGAAGGAGTTCTTCGGCCTG AGGCTGGAGGTGACGCCCGATGTCCTGATCCCCCGCGCCGATACCGAGACCCTGGTGGAATGGGCGCTCGAGCTGCTGCC CTGCAATGTCGAGACTGCCGTGGCCGACCTTGGCACGGGAAGCGGCGCGATCGCGCTGGCGCTGGCCGCGCGACGCCCCA CGTGCCGTGTGACCGCCGTGGACGCCAGCTCGGACGCCCTCGCGGTCGCCGAGCGGAACGGCGGCAGACTTGGCTTGGCG GTCGAATGGCGGCTCAGCGACTGGTTCTCGGCCCTCGAAGGCCGCCGATTCGCGCTGATCGTCAGCAATCCGCCCTACAT CGCCGATGGCGACTGCCACCTCGATGCCCTGACACATGAACCGCAGCGTGCGCTCACCTCCGGACCTGACGGCTTGGCAG CGATCCGTCACATCGTTGCGAGCGCCGCGAGCTTCCTGACAGCGGGCGGCTGGCTGCTGATCGAGCACGGCTATGACCAA GCCGAGGCGGTCCAGGCTTTGCTCGGCGTGGCGGGCTTCGAGCACATCGCCACCCGGCATGACCTGGGCGGCCAGCCACG CTGCTCGGGCGGTCGCTGCCGCGACTGA
Upstream 100 bases:
>100_bases TCATGGACGGTGACCTCGACCCGGTCGTGAAGGCGCTGGTAGCGGCGCGCGAGGCCGAGTTGCTGGCCGAGCTGGAAATC GGCTGAGGATGAGCTGCCCA
Downstream 100 bases:
>100_bases ACCTGGGAGGGCCCCGGCCCCGGTGCGCGGACCGTGCGAAAGATCGCACCGCCACGCGCGTGCCTGTTGCGATCCGACGA CCCCGATCCCACAAGCCGTC
Product: hemK protein
Products: NA
Alternate protein names: M.VchAHemK2P [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPPPDSVAAALLAARERGIDRLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGL RLEVTPDVLIPRADTETLVEWALELLPCNVETAVADLGTGSGAIALALAARRPTCRVTAVDASSDALAVAERNGGRLGLA VEWRLSDWFSALEGRRFALIVSNPPYIADGDCHLDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQ AEAVQALLGVAGFEHIATRHDLGGQPRCSGGRCRD
Sequences:
>Translated_275_residues MPPPDSVAAALLAARERGIDRLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGL RLEVTPDVLIPRADTETLVEWALELLPCNVETAVADLGTGSGAIALALAARRPTCRVTAVDASSDALAVAERNGGRLGLA VEWRLSDWFSALEGRRFALIVSNPPYIADGDCHLDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQ AEAVQALLGVAGFEHIATRHDLGGQPRCSGGRCRD >Mature_274_residues PPPDSVAAALLAARERGIDRLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGLR LEVTPDVLIPRADTETLVEWALELLPCNVETAVADLGTGSGAIALALAARRPTCRVTAVDASSDALAVAERNGGRLGLAV EWRLSDWFSALEGRRFALIVSNPPYIADGDCHLDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQA EAVQALLGVAGFEHIATRHDLGGQPRCSGGRCRD
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=249, Percent_Identity=32.5301204819277, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1787463, Length=255, Percent_Identity=45.8823529411765, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI87082085, Length=176, Percent_Identity=38.6363636363636, Blast_Score=96, Evalue=2e-21, Organism=Drosophila melanogaster, GI24582226, Length=243, Percent_Identity=27.5720164609054, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 29215; Mature: 29084
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPDSVAAALLAARERGIDRLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLA CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHHHHHHHHH RRAAGEPLAYVLGEKEFFGLRLEVTPDVLIPRADTETLVEWALELLPCNVETAVADLGTG HHHCCCCCEEEECCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCC SGAIALALAARRPTCRVTAVDASSDALAVAERNGGRLGLAVEWRLSDWFSALEGRRFALI CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHCCCEEEEE VSNPPYIADGDCHLDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQ ECCCCEEECCCCEEHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH AEAVQALLGVAGFEHIATRHDLGGQPRCSGGRCRD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PPPDSVAAALLAARERGIDRLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLA CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCHHCCHHHHHHHHHHHH RRAAGEPLAYVLGEKEFFGLRLEVTPDVLIPRADTETLVEWALELLPCNVETAVADLGTG HHHCCCCCEEEECCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCC SGAIALALAARRPTCRVTAVDASSDALAVAERNGGRLGLAVEWRLSDWFSALEGRRFALI CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHCCCEEEEE VSNPPYIADGDCHLDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQ ECCCCEEECCCCEEHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCH AEAVQALLGVAGFEHIATRHDLGGQPRCSGGRCRD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]