| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265690
Identifier: 124265690
GI number: 124265690
Start: 538866
End: 539207
Strand: Reverse
Name: 124265690
Synonym: Mpe_A0497
Alternate gene names: NA
Gene position: 539207-538866 (Counterclockwise)
Preceding gene: 124265691
Following gene: 124265689
Centisome position: 13.33
GC content: 72.22
Gene sequence:
>342_bases ATGGCTCTGTCCCGATCGCACTGCTGGTTGCCGGTTGCCCTGCTGGCCTGCTCCCTGGCCGCTGTGGCCACCGAACGCCC CGACCCGCTGAACGCCAGCGCGGCCGTCCCGACCTTCACCCCTCCATCGGCGTTCACCGGCTACAGCCGCCACGGCGACA CGAGGCTGCAGTCCTGGAAGGACGCGAACGACGCGGTCGGCCGCATCGGGGGCTGGCGCGCCTATGCGCGCGAGGCATCG CAGGCCTCGCGGCCGGCAAACGCTGCGCCGGTCACGCCCGCCGCGAGTGAATCGACCGGAGCCCCGTCGACGCCCCACGG CGCTCCTCATCACCATCACTGA
Upstream 100 bases:
>100_bases GACGGGCGTGTGCCTCGGCACGCGCTCGCGAGCGCCGCCGCCTCGATCCCGGCCGGTCCCGACCGCCCGGACCTCGAACG TGTTCCCGCGAGGATGCTCC
Downstream 100 bases:
>100_bases GAAGCGAGCGATGACGACACCACGACACGCCTGCGCCGCAGCGGCCCGCGGCCTGCCGCTCGTGCTGGCGAGCCTCGCGC TGGCCGGCTGCGCCTCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MALSRSHCWLPVALLACSLAAVATERPDPLNASAAVPTFTPPSAFTGYSRHGDTRLQSWKDANDAVGRIGGWRAYAREAS QASRPANAAPVTPAASESTGAPSTPHGAPHHHH
Sequences:
>Translated_113_residues MALSRSHCWLPVALLACSLAAVATERPDPLNASAAVPTFTPPSAFTGYSRHGDTRLQSWKDANDAVGRIGGWRAYAREAS QASRPANAAPVTPAASESTGAPSTPHGAPHHHH >Mature_112_residues ALSRSHCWLPVALLACSLAAVATERPDPLNASAAVPTFTPPSAFTGYSRHGDTRLQSWKDANDAVGRIGGWRAYAREASQ ASRPANAAPVTPAASESTGAPSTPHGAPHHHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11773; Mature: 11642
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSRSHCWLPVALLACSLAAVATERPDPLNASAAVPTFTPPSAFTGYSRHGDTRLQSWK CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC DANDAVGRIGGWRAYAREASQASRPANAAPVTPAASESTGAPSTPHGAPHHHH CCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALSRSHCWLPVALLACSLAAVATERPDPLNASAAVPTFTPPSAFTGYSRHGDTRLQSWK CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC DANDAVGRIGGWRAYAREASQASRPANAAPVTPAASESTGAPSTPHGAPHHHH CCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA