Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265681

Identifier: 124265681

GI number: 124265681

Start: 529474

End: 530667

Strand: Reverse

Name: 124265681

Synonym: Mpe_A0488

Alternate gene names: NA

Gene position: 530667-529474 (Counterclockwise)

Preceding gene: 124265682

Following gene: 124265679

Centisome position: 13.12

GC content: 73.87

Gene sequence:

>1194_bases
ATGATGCCGCGCATCGGTCTCGCGCTGGCCGGCGGCGGGCCATTGGGCGCGATCTACGAGATCGGCGCACTGTGCGCGCT
CGAGGAATCGATCACTGGCCTGCGCCTCACTCAGTGCCAGGGCTACGTGGGCGTGTCGGCCGGCGGCTTCGTGGCCGCCG
GACTGGCCAACGGCATCGGGCCGCGTGAGCTGTGCCGCTCCTTCATCGAGAACGAGGGGCCGCCGGACGACGTGTTCGAC
CCCGCGCTGCTGATGCGGCCGGCCTGGGGCGAGTTCGCGAAGCGCCTCGCGCGGGCGCCCGGTCTGGCCGGCGGCGCGGC
TCTGGACTATGCGCTGGGCTTCGCCACCCGCAGCCAGGTGCTCGACCAGCTCGGCCGCGCCATGCCGACCGGCCTGTTCT
CCAACCGCACGGTCCACCAGCACCTGAGCCGCGTGTTCGGCGCGCCCGGCCGCAGCAACGACTTCCGCACGCTGGCGCGC
CGGCTGGTGCTGGTGGCGGTCGACCTCGACAGCGGCGACGCCCGGCCCTTCGGCCTGCCGGGCCACGACCACGTGCCGAT
CTCGCTCGCCGTGCAGGCCAGCGCCGCGCTGCCCGGACTGTTCCCGCCGGTCGAGATCGACGGCCGCTGCTACGTCGATG
GCGTGCTGCGCAAGACGCTGCATGCCTCGGTCCTGCTCGACGAGGGCCTGGACCTGCTGATCTGCCTGAATCCGCTGGTG
CCCTACGACAGCCCCGCCGACGCGCACAGGCCGGCGGACGGTGCCAGGGCGCCGCTGGCGCGGCTGGTCGACGGCGGCCT
GCCGCAGGTGCTGAGCCAGACGTTCCGCACGCTGATCCGCTCGCGCATGGAGCTCGGCCTGCGCCAGTACGACCAACTCC
ACCCCGACACCGACATCCTGCTGTTCGAGCCCGACGCGCGCGACGCCAAGGTGTTCTTCACCAACCCGTTCAGCTACTCG
CAGCGCCGCCGCATGGCCGAGCACGCCTACCAGGCCACGCGGACTCAGTTGCGCGCGCGCCGCGCCGCACTCGGCCCGCG
GCTGGCTCGCCACGGCCTCGGCTGGAGCGCCGCGCTCGACGACCCGCGGCGCACGCTGCTCGACACGCGCCCGACGCCGG
TCGGCCGCGCCAACGAGGCGCTGCGCCGGCTCGAGACGACGCTCGACGCGCTGGACGCCGCGCTCACGGCCTGA

Upstream 100 bases:

>100_bases
TCGCCAACCCCGGCGGCTGCATGGCGGTCTATCACTGGAACGGCAGCGCCTACGTCCACGCCGCCAACCGCGCCATCGAG
CCCGGTGGCTGCCAGTTCCG

Downstream 100 bases:

>100_bases
CGGCGGCGCCGGAGCGCACCGCTCGTCAGGGGTGAAACTGCCCCGGCAACACCCACAGCAGCAGCGCCGTCATCGTCAGG
TAGCGCGCGAACTTGCCGAT

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Patatin Family Phospholipase; Patatin-Like Phospholipase; Alpha-Beta Hydrolase Family Esterase; Alpha/Beta Fold Family Hydrolase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIGPRELCRSFIENEGPPDDVFD
PALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQVLDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLAR
RLVLVAVDLDSGDARPFGLPGHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV
PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDILLFEPDARDAKVFFTNPFSYS
QRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALDDPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA

Sequences:

>Translated_397_residues
MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIGPRELCRSFIENEGPPDDVFD
PALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQVLDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLAR
RLVLVAVDLDSGDARPFGLPGHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV
PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDILLFEPDARDAKVFFTNPFSYS
QRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALDDPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA
>Mature_397_residues
MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIGPRELCRSFIENEGPPDDVFD
PALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQVLDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLAR
RLVLVAVDLDSGDARPFGLPGHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV
PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDILLFEPDARDAKVFFTNPFSYS
QRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALDDPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42753; Mature: 42753

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00260 GLUCAGON ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIG
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHCCCC
PRELCRSFIENEGPPDDVFDPALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQV
HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLARRLVLVAVDLDSGDARPFGLP
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCC
GHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV
CCCCCCEEEEEEEHHCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCC
PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDIL
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LFEPDARDAKVFFTNPFSYSQRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALD
EECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA
CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIG
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHCCCC
PRELCRSFIENEGPPDDVFDPALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQV
HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLARRLVLVAVDLDSGDARPFGLP
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCC
GHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV
CCCCCCEEEEEEEHHCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCC
PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDIL
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LFEPDARDAKVFFTNPFSYSQRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALD
EECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA
CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA