| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265681
Identifier: 124265681
GI number: 124265681
Start: 529474
End: 530667
Strand: Reverse
Name: 124265681
Synonym: Mpe_A0488
Alternate gene names: NA
Gene position: 530667-529474 (Counterclockwise)
Preceding gene: 124265682
Following gene: 124265679
Centisome position: 13.12
GC content: 73.87
Gene sequence:
>1194_bases ATGATGCCGCGCATCGGTCTCGCGCTGGCCGGCGGCGGGCCATTGGGCGCGATCTACGAGATCGGCGCACTGTGCGCGCT CGAGGAATCGATCACTGGCCTGCGCCTCACTCAGTGCCAGGGCTACGTGGGCGTGTCGGCCGGCGGCTTCGTGGCCGCCG GACTGGCCAACGGCATCGGGCCGCGTGAGCTGTGCCGCTCCTTCATCGAGAACGAGGGGCCGCCGGACGACGTGTTCGAC CCCGCGCTGCTGATGCGGCCGGCCTGGGGCGAGTTCGCGAAGCGCCTCGCGCGGGCGCCCGGTCTGGCCGGCGGCGCGGC TCTGGACTATGCGCTGGGCTTCGCCACCCGCAGCCAGGTGCTCGACCAGCTCGGCCGCGCCATGCCGACCGGCCTGTTCT CCAACCGCACGGTCCACCAGCACCTGAGCCGCGTGTTCGGCGCGCCCGGCCGCAGCAACGACTTCCGCACGCTGGCGCGC CGGCTGGTGCTGGTGGCGGTCGACCTCGACAGCGGCGACGCCCGGCCCTTCGGCCTGCCGGGCCACGACCACGTGCCGAT CTCGCTCGCCGTGCAGGCCAGCGCCGCGCTGCCCGGACTGTTCCCGCCGGTCGAGATCGACGGCCGCTGCTACGTCGATG GCGTGCTGCGCAAGACGCTGCATGCCTCGGTCCTGCTCGACGAGGGCCTGGACCTGCTGATCTGCCTGAATCCGCTGGTG CCCTACGACAGCCCCGCCGACGCGCACAGGCCGGCGGACGGTGCCAGGGCGCCGCTGGCGCGGCTGGTCGACGGCGGCCT GCCGCAGGTGCTGAGCCAGACGTTCCGCACGCTGATCCGCTCGCGCATGGAGCTCGGCCTGCGCCAGTACGACCAACTCC ACCCCGACACCGACATCCTGCTGTTCGAGCCCGACGCGCGCGACGCCAAGGTGTTCTTCACCAACCCGTTCAGCTACTCG CAGCGCCGCCGCATGGCCGAGCACGCCTACCAGGCCACGCGGACTCAGTTGCGCGCGCGCCGCGCCGCACTCGGCCCGCG GCTGGCTCGCCACGGCCTCGGCTGGAGCGCCGCGCTCGACGACCCGCGGCGCACGCTGCTCGACACGCGCCCGACGCCGG TCGGCCGCGCCAACGAGGCGCTGCGCCGGCTCGAGACGACGCTCGACGCGCTGGACGCCGCGCTCACGGCCTGA
Upstream 100 bases:
>100_bases TCGCCAACCCCGGCGGCTGCATGGCGGTCTATCACTGGAACGGCAGCGCCTACGTCCACGCCGCCAACCGCGCCATCGAG CCCGGTGGCTGCCAGTTCCG
Downstream 100 bases:
>100_bases CGGCGGCGCCGGAGCGCACCGCTCGTCAGGGGTGAAACTGCCCCGGCAACACCCACAGCAGCAGCGCCGTCATCGTCAGG TAGCGCGCGAACTTGCCGAT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Patatin Family Phospholipase; Patatin-Like Phospholipase; Alpha-Beta Hydrolase Family Esterase; Alpha/Beta Fold Family Hydrolase
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIGPRELCRSFIENEGPPDDVFD PALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQVLDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLAR RLVLVAVDLDSGDARPFGLPGHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDILLFEPDARDAKVFFTNPFSYS QRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALDDPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA
Sequences:
>Translated_397_residues MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIGPRELCRSFIENEGPPDDVFD PALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQVLDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLAR RLVLVAVDLDSGDARPFGLPGHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDILLFEPDARDAKVFFTNPFSYS QRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALDDPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA >Mature_397_residues MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIGPRELCRSFIENEGPPDDVFD PALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQVLDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLAR RLVLVAVDLDSGDARPFGLPGHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDILLFEPDARDAKVFFTNPFSYS QRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALDDPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42753; Mature: 42753
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00260 GLUCAGON ; PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIG CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHCCCC PRELCRSFIENEGPPDDVFDPALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQV HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLARRLVLVAVDLDSGDARPFGLP HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCC GHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV CCCCCCEEEEEEEHHCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCC PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDIL CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LFEPDARDAKVFFTNPFSYSQRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALD EECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMPRIGLALAGGGPLGAIYEIGALCALEESITGLRLTQCQGYVGVSAGGFVAAGLANGIG CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHCCCC PRELCRSFIENEGPPDDVFDPALLMRPAWGEFAKRLARAPGLAGGAALDYALGFATRSQV HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LDQLGRAMPTGLFSNRTVHQHLSRVFGAPGRSNDFRTLARRLVLVAVDLDSGDARPFGLP HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCC GHDHVPISLAVQASAALPGLFPPVEIDGRCYVDGVLRKTLHASVLLDEGLDLLICLNPLV CCCCCCEEEEEEEHHCCCCCCCCCEECCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCC PYDSPADAHRPADGARAPLARLVDGGLPQVLSQTFRTLIRSRMELGLRQYDQLHPDTDIL CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE LFEPDARDAKVFFTNPFSYSQRRRMAEHAYQATRTQLRARRAALGPRLARHGLGWSAALD EECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DPRRTLLDTRPTPVGRANEALRRLETTLDALDAALTA CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA