| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is purH [H]
Identifier: 124265678
GI number: 124265678
Start: 525930
End: 527525
Strand: Reverse
Name: purH [H]
Synonym: Mpe_A0485
Alternate gene names: 124265678
Gene position: 527525-525930 (Counterclockwise)
Preceding gene: 124265679
Following gene: 124265677
Centisome position: 13.04
GC content: 69.86
Gene sequence:
>1596_bases ATGGCCACCGCCCTCCTCTCCGTTTCCGACAAGACCGGCATCGTCGAACTCGCCCGGTCCCTGCATGCGCTGGGCGTGAA GCTGCTCTCGACCGGTGGCACGGCCAGGCTGCTGGCCGACAGCGGCCTCCCGGTCACCGAGGTGGCCGACCACACCGGCT TCCCCGAAATGCTCGACGGTCGCGTGAAGACGCTGCACCCGACCATCCACGGCGGCCTGCTGGCGCGCCGCGACCTGCCG GCGCACATGGCCTCGCTGGCCGCGCACGGCATCGAGACGATCGACCTGCTGGTGGTCAACCTCTACCCCTTCGAGGCCAC AGTCGCGAAGCCCGGCTGCACGCTGGAGGACGCGATCGAGAACATCGACATCGGCGGACCGGCGATGGTGCGTTCGGCCG CCAAGAACTGGAAGGACGTGGCGGTGCTGACCGACGCCTCGCAGTACGCCGGCGTGCTGGCCGACCTGCAGCAGGACGGC CGGGTGAGCGAGAGCACGCGCTTCGCGCTTGCGGTCGCGGCCTTCAACCGCATCAGCAACTACGACGCGGCCATCAGCGA CCACCTGTCGGCGCTGCGCCCCGACGGCACGCGCGCCGAGTTCCCGGCGCAAAGCAACGGCCGCTTCGTCAAGCTGCAGG ACCTGCGCTACGGCGAGAACCCGCACCAGAGCGCCGCGTTCTACCGCGACCTGCACCCGGCGCCTGGCTCGCTGGTGAGC GCCGTGCAGCTGCAGGGCAAGGAGCTGTCGTACAACAACATCGCCGACGCCGATGCGGCGTGGGAGTGCGTGAAAGGCTT CGACGCTTCCGTCGACGGGCCGGCCTGCGTGATCGTCAAGCACGCCAACCCCTGCGGCGTGGCCCTCGGCGCCAACGCGG CCGAGGCCTATGGCAAGGCCTTCCGCACCGACCCGACCTCCGCGTTCGGCGGCATCATCGCCTTCAACGTTCCGGTCGAC GGCGCGGCAGCGCAGGCGATCGCGAAGCAGTTCGTCGAGGTGCTGATCGCCCCCGGCTATACCGACGAGGCGCGCGCCGT GTTCGCCGCCAAGGCCAACACGCGCGTGCTGCAGATCTCGCTCGACGGCGTGCAGCGCGACGCGCCCGACGCCTGGTCGC GCGGCCTCAATTCGCACGACATCAAGCGCGTCGGCTCGGGTCTGCTGATCCAGAGCGCCGACAACCACGTGCTCGGACTG CAGGACCTGAAAGTCGTCACGAAGCTGGCGCCGACCGACGGACAGCTGGCCGACCTGCTGTTCGCGTGGAAGGTGGCCAA GTTCGTCAAGAGCAATGCCATCGTGTTCTGCGGCGACGGCATGACGCTCGGCGTCGGCGCCGGCCAGATGAGCCGGCTCG ACAGCGCGCGCATCGCCAGCATCAAGGCCAGCCACGCCGACCTGAGCCTGGCCGGCTCGGCGGTCGCGAGCGACGCCTTC TTCCCGTTCCGCGACGGCCTCGACGTGCTGGCCGATGCCGGAGCGCGCAGCGTCATCCAGCCCGGCGGCAGCCTGCGCGA CGACGAGGTGATCGCCGCCGCCAACGAACGCGGCATCGCGATGGTGCTGACAGGTGTGCGTCACTTCAGGCACTGA
Upstream 100 bases:
>100_bases ACCGCAACACCCTGCGGCGCAAGTTGCTCGAGCACAAGCTCATCAAGCCCTGAGCGCGCCGTACTCCGTTTTCCGCCCCT ACCCCGCTTCCACGACCGCC
Downstream 100 bases:
>100_bases GCACGGCCGGCTGCGGTGCCCCGTGGCGCGTGCTCCGAATAGCAGGGGACCATGTCCGCCGCCGCCGACTCGGTAGGCCT GTTGCTGTCCTTCCTGGCAC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MATALLSVSDKTGIVELARSLHALGVKLLSTGGTARLLADSGLPVTEVADHTGFPEMLDGRVKTLHPTIHGGLLARRDLP AHMASLAAHGIETIDLLVVNLYPFEATVAKPGCTLEDAIENIDIGGPAMVRSAAKNWKDVAVLTDASQYAGVLADLQQDG RVSESTRFALAVAAFNRISNYDAAISDHLSALRPDGTRAEFPAQSNGRFVKLQDLRYGENPHQSAAFYRDLHPAPGSLVS AVQLQGKELSYNNIADADAAWECVKGFDASVDGPACVIVKHANPCGVALGANAAEAYGKAFRTDPTSAFGGIIAFNVPVD GAAAQAIAKQFVEVLIAPGYTDEARAVFAAKANTRVLQISLDGVQRDAPDAWSRGLNSHDIKRVGSGLLIQSADNHVLGL QDLKVVTKLAPTDGQLADLLFAWKVAKFVKSNAIVFCGDGMTLGVGAGQMSRLDSARIASIKASHADLSLAGSAVASDAF FPFRDGLDVLADAGARSVIQPGGSLRDDEVIAAANERGIAMVLTGVRHFRH
Sequences:
>Translated_531_residues MATALLSVSDKTGIVELARSLHALGVKLLSTGGTARLLADSGLPVTEVADHTGFPEMLDGRVKTLHPTIHGGLLARRDLP AHMASLAAHGIETIDLLVVNLYPFEATVAKPGCTLEDAIENIDIGGPAMVRSAAKNWKDVAVLTDASQYAGVLADLQQDG RVSESTRFALAVAAFNRISNYDAAISDHLSALRPDGTRAEFPAQSNGRFVKLQDLRYGENPHQSAAFYRDLHPAPGSLVS AVQLQGKELSYNNIADADAAWECVKGFDASVDGPACVIVKHANPCGVALGANAAEAYGKAFRTDPTSAFGGIIAFNVPVD GAAAQAIAKQFVEVLIAPGYTDEARAVFAAKANTRVLQISLDGVQRDAPDAWSRGLNSHDIKRVGSGLLIQSADNHVLGL QDLKVVTKLAPTDGQLADLLFAWKVAKFVKSNAIVFCGDGMTLGVGAGQMSRLDSARIASIKASHADLSLAGSAVASDAF FPFRDGLDVLADAGARSVIQPGGSLRDDEVIAAANERGIAMVLTGVRHFRH >Mature_530_residues ATALLSVSDKTGIVELARSLHALGVKLLSTGGTARLLADSGLPVTEVADHTGFPEMLDGRVKTLHPTIHGGLLARRDLPA HMASLAAHGIETIDLLVVNLYPFEATVAKPGCTLEDAIENIDIGGPAMVRSAAKNWKDVAVLTDASQYAGVLADLQQDGR VSESTRFALAVAAFNRISNYDAAISDHLSALRPDGTRAEFPAQSNGRFVKLQDLRYGENPHQSAAFYRDLHPAPGSLVSA VQLQGKELSYNNIADADAAWECVKGFDASVDGPACVIVKHANPCGVALGANAAEAYGKAFRTDPTSAFGGIIAFNVPVDG AAAQAIAKQFVEVLIAPGYTDEARAVFAAKANTRVLQISLDGVQRDAPDAWSRGLNSHDIKRVGSGLLIQSADNHVLGLQ DLKVVTKLAPTDGQLADLLFAWKVAKFVKSNAIVFCGDGMTLGVGAGQMSRLDSARIASIKASHADLSLAGSAVASDAFF PFRDGLDVLADAGARSVIQPGGSLRDDEVIAAANERGIAMVLTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=487, Percent_Identity=35.9342915811088, Blast_Score=268, Evalue=1e-71, Organism=Escherichia coli, GI1790439, Length=536, Percent_Identity=56.9029850746269, Blast_Score=591, Evalue=1e-170, Organism=Caenorhabditis elegans, GI71985564, Length=487, Percent_Identity=34.0862422997947, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71985574, Length=319, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323056, Length=489, Percent_Identity=36.40081799591, Blast_Score=274, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6323768, Length=490, Percent_Identity=36.530612244898, Blast_Score=269, Evalue=8e-73, Organism=Drosophila melanogaster, GI24649832, Length=486, Percent_Identity=36.4197530864198, Blast_Score=260, Evalue=2e-69,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55695; Mature: 55563
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATALLSVSDKTGIVELARSLHALGVKLLSTGGTARLLADSGLPVTEVADHTGFPEMLDG CCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHCCCCHHHHCC RVKTLHPTIHGGLLARRDLPAHMASLAAHGIETIDLLVVNLYPFEATVAKPGCTLEDAIE CCEEECCHHHCCEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCEEEECCCCCCHHHHHH NIDIGGPAMVRSAAKNWKDVAVLTDASQYAGVLADLQQDGRVSESTRFALAVAAFNRISN HCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC YDAAISDHLSALRPDGTRAEFPAQSNGRFVKLQDLRYGENPHQSAAFYRDLHPAPGSLVS CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHH AVQLQGKELSYNNIADADAAWECVKGFDASVDGPACVIVKHANPCGVALGANAAEAYGKA HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHH FRTDPTSAFGGIIAFNVPVDGAAAQAIAKQFVEVLIAPGYTDEARAVFAAKANTRVLQIS HCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEE LDGVQRDAPDAWSRGLNSHDIKRVGSGLLIQSADNHVLGLQDLKVVTKLAPTDGQLADLL ECCCCCCCCHHHHCCCCCHHHHHHCCCEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHH FAWKVAKFVKSNAIVFCGDGMTLGVGAGQMSRLDSARIASIKASHADLSLAGSAVASDAF HHHHHHHHHHCCEEEEECCCCEEEECCCHHHHCCCHHHHEEECCCCCCCCCCCHHHCCCC FPFRDGLDVLADAGARSVIQPGGSLRDDEVIAAANERGIAMVLTGVRHFRH CCCCCCHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCEEEEEHHHHHHCC >Mature Secondary Structure ATALLSVSDKTGIVELARSLHALGVKLLSTGGTARLLADSGLPVTEVADHTGFPEMLDG CEEEEEECCCCCHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHCCCCHHHHCC RVKTLHPTIHGGLLARRDLPAHMASLAAHGIETIDLLVVNLYPFEATVAKPGCTLEDAIE CCEEECCHHHCCEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCEEEECCCCCCHHHHHH NIDIGGPAMVRSAAKNWKDVAVLTDASQYAGVLADLQQDGRVSESTRFALAVAAFNRISN HCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC YDAAISDHLSALRPDGTRAEFPAQSNGRFVKLQDLRYGENPHQSAAFYRDLHPAPGSLVS CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHH AVQLQGKELSYNNIADADAAWECVKGFDASVDGPACVIVKHANPCGVALGANAAEAYGKA HHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHH FRTDPTSAFGGIIAFNVPVDGAAAQAIAKQFVEVLIAPGYTDEARAVFAAKANTRVLQIS HCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEE LDGVQRDAPDAWSRGLNSHDIKRVGSGLLIQSADNHVLGLQDLKVVTKLAPTDGQLADLL ECCCCCCCCHHHHCCCCCHHHHHHCCCEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHH FAWKVAKFVKSNAIVFCGDGMTLGVGAGQMSRLDSARIASIKASHADLSLAGSAVASDAF HHHHHHHHHHCCEEEEECCCCEEEECCCHHHHCCCHHHHEEECCCCCCCCCCCHHHCCCC FPFRDGLDVLADAGARSVIQPGGSLRDDEVIAAANERGIAMVLTGVRHFRH CCCCCCHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA