| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265667
Identifier: 124265667
GI number: 124265667
Start: 514705
End: 515214
Strand: Reverse
Name: 124265667
Synonym: Mpe_A0474
Alternate gene names: NA
Gene position: 515214-514705 (Counterclockwise)
Preceding gene: 124265668
Following gene: 124265643
Centisome position: 12.74
GC content: 67.84
Gene sequence:
>510_bases ATGCACTCACCCATCATGAGCATTCCCCGCGGCGTCGCAACGGCCCTTCGCACGACAGCGCTGACCGCCGCCCTGATCGG CGCGGCCGGCGTCGCGGCGCAGCAGGCGTCGACAGAACCGATCACGACGCCGGTGACCATCGATCTCTCGGCCTTGCCGG TGCTTGGCGCGCCATGGCGCGAAGACAACCCCTATCGCGGCGACGCGCAGGTCGCCGAGATCGGGCGCGCGCTCTTCAAT CAGGCCTGCGCCCGCTGCCATGGCGATGACGGCAATGCCACCCATCACGTCGGCACCGACCTGCGGCGCCTCGACAGCTA CTGCTTCGCCAAGATCAAGGACCTGGCCGCCCGCCGTCACTGCCTGCGCGACAACGATCACTACTTCAAGGAATCGGTGC TGCGCGGCAAGATCCGCGTCGGCGTGACGCACATGCCGCCCTGGGAAGGCGTGCTGACGCAGGAAGCCGTGTGGTCGCTG AAGACCTTCCTGGAATCCCGCAGGCCGTGA
Upstream 100 bases:
>100_bases CTTCACCGGCGCGACGATGAAGGGCAACGTGCTGCGCTTCGCCATCTTCCCGGACTCGACCTTCGATCAATGCACCGGTT GCCCCACGGACTGGTAGGCC
Downstream 100 bases:
>100_bases GAACGGTACCGGTCGGCCACGAAAAACGGCACGGACGCGCGAGCGTCCGTGCCGTGCAACGCGCCCGGTCATCCCGGGCG TGGTACTCGCTCAGTTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome; Cytochrome C Class I; Cytochrome C-Type Protein; Cytochrome C Mono-Or Diheme Variant; Cytochrome C Domain-Containing Protein
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWREDNPYRGDAQVAEIGRALFN QACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRHCLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSL KTFLESRRP
Sequences:
>Translated_169_residues MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWREDNPYRGDAQVAEIGRALFN QACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRHCLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSL KTFLESRRP >Mature_169_residues MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWREDNPYRGDAQVAEIGRALFN QACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRHCLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSL KTFLESRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18480; Mature: 18480
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC EDNPYRGDAQVAEIGRALFNQACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRH CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSLKTFLESRRP HHCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC EDNPYRGDAQVAEIGRALFNQACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRH CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSLKTFLESRRP HHCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA