Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265667

Identifier: 124265667

GI number: 124265667

Start: 514705

End: 515214

Strand: Reverse

Name: 124265667

Synonym: Mpe_A0474

Alternate gene names: NA

Gene position: 515214-514705 (Counterclockwise)

Preceding gene: 124265668

Following gene: 124265643

Centisome position: 12.74

GC content: 67.84

Gene sequence:

>510_bases
ATGCACTCACCCATCATGAGCATTCCCCGCGGCGTCGCAACGGCCCTTCGCACGACAGCGCTGACCGCCGCCCTGATCGG
CGCGGCCGGCGTCGCGGCGCAGCAGGCGTCGACAGAACCGATCACGACGCCGGTGACCATCGATCTCTCGGCCTTGCCGG
TGCTTGGCGCGCCATGGCGCGAAGACAACCCCTATCGCGGCGACGCGCAGGTCGCCGAGATCGGGCGCGCGCTCTTCAAT
CAGGCCTGCGCCCGCTGCCATGGCGATGACGGCAATGCCACCCATCACGTCGGCACCGACCTGCGGCGCCTCGACAGCTA
CTGCTTCGCCAAGATCAAGGACCTGGCCGCCCGCCGTCACTGCCTGCGCGACAACGATCACTACTTCAAGGAATCGGTGC
TGCGCGGCAAGATCCGCGTCGGCGTGACGCACATGCCGCCCTGGGAAGGCGTGCTGACGCAGGAAGCCGTGTGGTCGCTG
AAGACCTTCCTGGAATCCCGCAGGCCGTGA

Upstream 100 bases:

>100_bases
CTTCACCGGCGCGACGATGAAGGGCAACGTGCTGCGCTTCGCCATCTTCCCGGACTCGACCTTCGATCAATGCACCGGTT
GCCCCACGGACTGGTAGGCC

Downstream 100 bases:

>100_bases
GAACGGTACCGGTCGGCCACGAAAAACGGCACGGACGCGCGAGCGTCCGTGCCGTGCAACGCGCCCGGTCATCCCGGGCG
TGGTACTCGCTCAGTTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome; Cytochrome C Class I; Cytochrome C-Type Protein; Cytochrome C Mono-Or Diheme Variant; Cytochrome C Domain-Containing Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWREDNPYRGDAQVAEIGRALFN
QACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRHCLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSL
KTFLESRRP

Sequences:

>Translated_169_residues
MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWREDNPYRGDAQVAEIGRALFN
QACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRHCLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSL
KTFLESRRP
>Mature_169_residues
MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWREDNPYRGDAQVAEIGRALFN
QACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRHCLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSL
KTFLESRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18480; Mature: 18480

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
EDNPYRGDAQVAEIGRALFNQACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRH
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSLKTFLESRRP
HHCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSPIMSIPRGVATALRTTALTAALIGAAGVAAQQASTEPITTPVTIDLSALPVLGAPWR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
EDNPYRGDAQVAEIGRALFNQACARCHGDDGNATHHVGTDLRRLDSYCFAKIKDLAARRH
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CLRDNDHYFKESVLRGKIRVGVTHMPPWEGVLTQEAVWSLKTFLESRRP
HHCCCHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA