Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is gpmB [H]

Identifier: 124265523

GI number: 124265523

Start: 361175

End: 361876

Strand: Reverse

Name: gpmB [H]

Synonym: Mpe_A0330

Alternate gene names: 124265523

Gene position: 361876-361175 (Counterclockwise)

Preceding gene: 124265524

Following gene: 124265522

Centisome position: 8.95

GC content: 71.65

Gene sequence:

>702_bases
ATGCCGCAGTCGCAACTCACCCGCATCGTCGCGGTACGCCACGGCGAGACCGCGTGGAACGTCGACACGCGCATCCAGGG
CCAGCTCGACATCGGCCTGAACGACAAGGGCCGCTGGCAGGCCGGGCGCGTGGCGCAGGCCCTCAGCGGCGAAGGCCTCG
ACGTGGTCTATGCCAGCGACTTGGCGCGCGCCCATGACACCGCACTCGCCATCGGCGCGGCCGCCGGGCTCGCGGTTCGG
ACCGACCGCGGACTGCGCGAACGAGCCTTCGGTCGGTTCGAGGGCCAGACCTGGGCGGACATCGAGACCCACTGGCCCGC
CGAGAGCGCGCGCTGGCGGGCGCGCGATGTCGACTTCGGCCCGGAAGGTGGCGAGACCTTGCGTGCCTTCTACGCGCGCG
TGGTCGATACCGCCGAGCGGCTGGCAAGCCGCCATCCGGGCCAGGTGATCGCACTGGTGGCGCACGGCGGCGTGATGGAC
TGTCTGTATCGCGCCGCAGCGCGCGTTGGCCTCGACGCGCCGCGCACCTGGCAGCTCGGCAACACCGCGGTCAACCGGCT
GCTGTACACGCCCGAGGGCTTTACGCTGGTCGGCTGGAGCGACACCTCGCACCTCGATGGCCTGCAGCACGATGAGTTCA
GCGACGGCGCCCGCGATAGCCAACCTGCCGCTGCGGGCGACAAGGTCGGCCACGCGGCCTGA

Upstream 100 bases:

>100_bases
GCGCGCAAGTGCGGGCTGCGATGCGCGGCCATGTGCTGGCGGAGGCGTCCTTCAGCGGCGGCTACAGCCTCAACGCACGT
CTGAACGCGAGCGGCACCTG

Downstream 100 bases:

>100_bases
GTCGACTCGCCCGATGCGTCCTGCTCCCGCCCGGGTCGGTGATCCCGTTGACGCGATCGACAGCCCCGCGCTGGTGGTGG
AAATCGACGCCTTCGAGCGA

Product: phosphoglycerate mutase

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MPQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASDLARAHDTALAIGAAAGLAVR
TDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFGPEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMD
CLYRAAARVGLDAPRTWQLGNTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA

Sequences:

>Translated_233_residues
MPQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASDLARAHDTALAIGAAAGLAVR
TDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFGPEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMD
CLYRAAARVGLDAPRTWQLGNTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA
>Mature_232_residues
PQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASDLARAHDTALAIGAAAGLAVRT
DRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFGPEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMDC
LYRAAARVGLDAPRTWQLGNTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=217, Percent_Identity=31.7972350230415, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786857, Length=173, Percent_Identity=30.0578034682081, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 25190; Mature: 25059

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASD
CCHHHHEEEEEEECCCEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEHHH
LARAHDTALAIGAAAGLAVRTDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFG
HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCCCC
PEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMDCLYRAAARVGLDAPRTWQLG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECC
NTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA
HHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASD
CHHHHEEEEEEECCCEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEHHH
LARAHDTALAIGAAAGLAVRTDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFG
HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCCCC
PEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMDCLYRAAARVGLDAPRTWQLG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECC
NTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA
HHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA