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The map label for this gene is ybbN [H]

Identifier: 124265487

GI number: 124265487

Start: 319055

End: 319999

Strand: Reverse

Name: ybbN [H]

Synonym: Mpe_A0294

Alternate gene names: 124265487

Gene position: 319999-319055 (Counterclockwise)

Preceding gene: 124265493

Following gene: 124265475

Centisome position: 7.91

GC content: 69.84

Gene sequence:

>945_bases
ATGATCGACATCACCCTCCAGAACTTCGAAGCCGAGCTGATCCAAGCGTCGATGCAGACCCCCGTGCTGCTCGACATCTG
GGCGCCGTGGTGCGGACCGTGCAAGTCGCTCGGCCCGGTGCTGGAGAAGCTGGAAGCGGATTACGCGGGTCGCTTCGCGC
TGGCCAAGCTCAACAGCGACGACCAGCCCGACATCGCAGGCCAGTTGAGCCAGGCTTTCGGCGTGCGCTCGATCCCGTTC
TGCGTGATGTTCGTCGGCGGCCAGCCGGTCGACGGCTTCGTGGGCGCGCTGCCGGAGGCGCAGATCCGCAGTTTCCTCGA
CAAGCATGTGCCGAGCGAAGACGCACTGGCGGCGGAAGAGGAGGCCCTGGAGGCCGAGCAACTGGCCGCCGAGGGCGACA
ACGATGCCGCGCTCGCCAAGCTGTCCGACGCCCTGGCGATCGCGCCGGGCGACGACGCGATCCGCGCTGACTACGTGAAA
CGCCTGCTGGAGGCCGGCCGCACCGCCGACGCGCGCCGCGTGTACGAGCCGCTGGCGCCGAAGGCGATCGTCGACGCACG
CGCCAGCGCGCTGGGCCTTTGGCTCGACGCCTGCGAGGCAGCCGAGCGGGCCCGTTCGCCGGAGGCGCTGGCCGCGGCGA
TCGGTGCCGACAGGCGCGACTTCGCGGCGCGCTTCGAGCTGGCGCAGACGCTGCTCGCCGCCCAGCGGCCGACCGAAGCG
ATGGACGAACTGCTCGAGATCCTGATGCGCGACAAGGCCTGGTCCGACGAGCGTGCGCGCAAGCTCTATGTCGCCATCCT
CGAGCTGCTGAGCAAGCCTCCGCCGAAGGTCGCCTCGCCTGCCGAGGCCAAGGGAACACTGGAGATCGCCGGCAAGGCCG
CCGCCGTGGCCAGCGACCCGGTGATCGACGGCTACCGCCGCAAGCTCAGCATGGTGCTGTTCTGA

Upstream 100 bases:

>100_bases
CGATCAGGGGAATCGCTGCGTTCACAGCCGCTCCGGTTCCGGAAAACCCCAAATTGTAGGCGGCGCTTGGCTTTGCGGCC
GGCGACCCCAACTGACTCAG

Downstream 100 bases:

>100_bases
TTTTTACCTGACCCCGCCGCCGGGCGGCCGCTGCCCTCAGCCGGGGCTTGCGGACGTACCGAAGGTGGCGTCCAGCACGG
CGACGATGAGCGCCTTCTCG

Product: putative thioredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MIDITLQNFEAELIQASMQTPVLLDIWAPWCGPCKSLGPVLEKLEADYAGRFALAKLNSDDQPDIAGQLSQAFGVRSIPF
CVMFVGGQPVDGFVGALPEAQIRSFLDKHVPSEDALAAEEEALEAEQLAAEGDNDAALAKLSDALAIAPGDDAIRADYVK
RLLEAGRTADARRVYEPLAPKAIVDARASALGLWLDACEAAERARSPEALAAAIGADRRDFAARFELAQTLLAAQRPTEA
MDELLEILMRDKAWSDERARKLYVAILELLSKPPPKVASPAEAKGTLEIAGKAAAVASDPVIDGYRRKLSMVLF

Sequences:

>Translated_314_residues
MIDITLQNFEAELIQASMQTPVLLDIWAPWCGPCKSLGPVLEKLEADYAGRFALAKLNSDDQPDIAGQLSQAFGVRSIPF
CVMFVGGQPVDGFVGALPEAQIRSFLDKHVPSEDALAAEEEALEAEQLAAEGDNDAALAKLSDALAIAPGDDAIRADYVK
RLLEAGRTADARRVYEPLAPKAIVDARASALGLWLDACEAAERARSPEALAAAIGADRRDFAARFELAQTLLAAQRPTEA
MDELLEILMRDKAWSDERARKLYVAILELLSKPPPKVASPAEAKGTLEIAGKAAAVASDPVIDGYRRKLSMVLF
>Mature_314_residues
MIDITLQNFEAELIQASMQTPVLLDIWAPWCGPCKSLGPVLEKLEADYAGRFALAKLNSDDQPDIAGQLSQAFGVRSIPF
CVMFVGGQPVDGFVGALPEAQIRSFLDKHVPSEDALAAEEEALEAEQLAAEGDNDAALAKLSDALAIAPGDDAIRADYVK
RLLEAGRTADARRVYEPLAPKAIVDARASALGLWLDACEAAERARSPEALAAAIGADRRDFAARFELAQTLLAAQRPTEA
MDELLEILMRDKAWSDERARKLYVAILELLSKPPPKVASPAEAKGTLEIAGKAAAVASDPVIDGYRRKLSMVLF

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=101, Percent_Identity=38.6138613861386, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI87081747, Length=267, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788936, Length=109, Percent_Identity=36.697247706422, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082331, Length=110, Percent_Identity=35.4545454545455, Blast_Score=85, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI212646193, Length=114, Percent_Identity=36.8421052631579, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573567, Length=114, Percent_Identity=34.2105263157895, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 33739; Mature: 33739

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDITLQNFEAELIQASMQTPVLLDIWAPWCGPCKSLGPVLEKLEADYAGRFALAKLNSD
CEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
DQPDIAGQLSQAFGVRSIPFCVMFVGGQPVDGFVGALPEAQIRSFLDKHVPSEDALAAEE
CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
EALEAEQLAAEGDNDAALAKLSDALAIAPGDDAIRADYVKRLLEAGRTADARRVYEPLAP
HHHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
KAIVDARASALGLWLDACEAAERARSPEALAAAIGADRRDFAARFELAQTLLAAQRPTEA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
MDELLEILMRDKAWSDERARKLYVAILELLSKPPPKVASPAEAKGTLEIAGKAAAVASDP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHCCCC
VIDGYRRKLSMVLF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MIDITLQNFEAELIQASMQTPVLLDIWAPWCGPCKSLGPVLEKLEADYAGRFALAKLNSD
CEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
DQPDIAGQLSQAFGVRSIPFCVMFVGGQPVDGFVGALPEAQIRSFLDKHVPSEDALAAEE
CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
EALEAEQLAAEGDNDAALAKLSDALAIAPGDDAIRADYVKRLLEAGRTADARRVYEPLAP
HHHHHHHHHHCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
KAIVDARASALGLWLDACEAAERARSPEALAAAIGADRRDFAARFELAQTLLAAQRPTEA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
MDELLEILMRDKAWSDERARKLYVAILELLSKPPPKVASPAEAKGTLEIAGKAAAVASDP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHCCCC
VIDGYRRKLSMVLF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]